FFCP PHASE1:Mm9::chr10:86241842..86241849,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:86241842..86241849,+
|short_description=p5@Nt5dc3
|description=CAGE_peak_5_at_Nt5dc3_5end
|association_with_transcript=92bp_to_ENSMUST00000099396,NM_17533...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=103466 | |EntrezGene=103466 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3UHB1 | |UniProt=Q3UHB1 | ||
|association_with_transcript=92bp_to_ENSMUST00000099396,NM_175331,uc007gqn.1_5end | |||
|cluster_id=chr10:86241842..86241849,+ | |||
|description=CAGE_peak_5_at_Nt5dc3_5end | |||
|id=chr10:86241842..86241849,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,3.24e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.23e-08!63;UBERON:0000955!2.57e-08!50;UBERON:0006238!2.57e-08!50;UBERON:0002616!6.06e-08!49;UBERON:0001049!2.50e-07!52;UBERON:0005068!2.50e-07!52;UBERON:0006241!2.50e-07!52;UBERON:0007135!2.50e-07!52;UBERON:0002346!8.44e-07!71;UBERON:0003075!8.44e-07!71;UBERON:0007284!8.44e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.07e-11,54;UBERON:0010314,8.87e-10,92;UBERON:0001017,1.27e-09,73;UBERON:0002616,1.80e-09,46;UBERON:0001016,3.29e-09,75;UBERON:0000955,3.54e-09,47;UBERON:0006238,3.54e-09,47;UBERON:0002021,3.56e-09,10;UBERON:0000411,3.56e-09,10;UBERON:0001950,3.56e-09,10;UBERON:0001049,5.23e-09,52;UBERON:0005068,5.23e-09,52;UBERON:0006241,5.23e-09,52;UBERON:0007135,5.23e-09,52;UBERON:0003080,1.14e-07,40;UBERON:0004121,1.21e-07,95;UBERON:0000924,1.21e-07,95;UBERON:0006601,1.21e-07,95;UBERON:0003528,2.80e-07,29;UBERON:0002791,2.80e-07,29;UBERON:0001893,2.80e-07,29;UBERON:0004684,3.24e-07,3;UBERON:0002275,3.24e-07,3;UBERON:0002780,8.14e-07,39;UBERON:0001890,8.14e-07,39;UBERON:0006240,8.14e-07,39 | |||
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0.129123323441576,0.84473233291,1.40438715793196,0.68487187290202,0.478632953972018,0.342401459862411,0.262261207256992,0.999329285446988,0.202475267389826,0.699561878128147,0.473193248037357,0.685572168028694,0.42438965179803,0.680346321208558,0,0,0.159992422793407,0,0,0.430761996159075,0,0,0,0,1.27006134691926,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.550640256485045,0,0.218025156380447,0,0.194429899074283,0,0,1.67782606057736,0,0.336093799142464,0,0,0,1.01158230429799,1.5869729378161,0,0,0,0.449949858640699,0.988866362566974,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,4.40463523997555,3.31987079021488,1.84327839907492,1.05509030184155,0.548925861614458,1.56274011167028,1.11673199600552,0,0.916789486660861,0,0.569486723196412,0.931997229126503,0.302904773332736,0.226714680320357,0,0,0,0.539703191637817,0,0.448026887097336,0.702222100658759,0.340860645156116,0.259786004602869,0,0.281686839553361,0,2.54805239706646,0,0,0,0,0.45673551887624,0.517875767294343,1.33597925158342,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0.502666365318702,0,0,0.884610551949874,0.161766849947409,2.42925670306433,0.484875253135222,0,0.585561594023094,1.8850203613211,0,0.479260498023681,0,0,1.64769703345305,0.915001205637253,0.502617408451458,2.60736480288415,2.81287003063364,2.28566849015516,1.94689515681309,0.305518091550949,0.497627882440372,1.26361379216837,0.841767423545896,0,0,0.180062129805349,0,0.408218994907967,0.2562274405697,0.374806898238915,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0.852490498186778,0.207125772535502,0,0.180062061461015,0.23674473558521,0.590292695242212,0.154267112887378,0.232533944750408,1.3413670069981,2.10177616260905,1.31647879930784,0.820837320395476,2.51313309592153,2.92399974850665,2.19550115291051,1.34206418760372,3.99550902271842,0.617427674275707,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0.193952487167626,0.280543279561274,0.189709611372772,0,0,0.123397163921801,0.889357881261447,0,0,0,0,0,0,0,0.648540907100142,0.274561413188081,0,0,0,0.757736633841335,0.896987067609561,0.482443521363367,0,0.189491411770485,0.162964976442026,0,0,0,0.476087281772027,0,0,0,0.478364305972461,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,2.0871576698413,1.05490517932983,0,6.5642441073137,0,0,0,0,0,0,0,0,0,0.963963949265421,0.283880170416537,0.178065603667255,0,0.164970122972535,1.32745138339963,0,0,0,0.885905678642318,0,0,0.363533729477506,0.712994756769443,1.26414703174326,0,3.09406629744561,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0.913394847343798,0,0,0,0.98931751764888,0,0.120625849856312,0.238744688006273,0,0,2.03967832211561,0.170870880797853,0,0.185194527369712,0,0,0.228778173206523,0.679913719975421,0.559805809294632,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.523511883968059,0,3.72803587852155,0,0,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0.241584120826006,0.576060012515731,0,0,0,0,0.179026695667481,0,0.240390899039938,0,0,0.0762068066549998,0,0,0.192423683280659,0,1.13365191807606,0.221985953374065,0.269141569828427,0.167884616364078,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,2.82375921308533,0.460325236507177,1.14579102687879,2.40594455281163,4.11049511862385,0,0.675022500231806,2.2516060161211,1.81256963593682,2.07104124700728,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.187283014939765,0.256100609619477,0.34461281373368,0.476293691283074,0.463537303779422,0.192909220463705,0,0.441596760403192,1.02860775715625,0.354951612318675,0.476872379894642,0.436039249896986,0,0.592302255241736,0.182927972872773,0.263069711437843,0,0.561142271657738,0.474540072496697,0.29551344712669,0,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.57386499620653,1.10295709559758,1.62307484934295 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|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0.129123323441576,0.84473233291,1.40438715793196,0.68487187290202,0.478632953972018,0.342401459862411,0.262261207256992,0.999329285446988,0.202475267389826,0.699561878128147,0.473193248037357,0.685572168028694,0.42438965179803,0.680346321208558,0,0,0.159992422793407,0,0,0.430761996159075,0,0,0,0,1.27006134691926,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.550640256485045,0,0.218025156380447,0,0.194429899074283,0,0,1.67782606057736,0,0.336093799142464,0,0,0,1.01158230429799,1.5869729378161,0,0,0,0.449949858640699,0.988866362566974,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,4.40463523997555,3.31987079021488,1.84327839907492,1.05509030184155,0.548925861614458,1.56274011167028,1.11673199600552,0,0.916789486660861,0,0.569486723196412,0.931997229126503,0.302904773332736,0.226714680320357,0,0,0,0.539703191637817,0,0.448026887097336,0.702222100658759,0.340860645156116,0.259786004602869,0,0.281686839553361,0,2.54805239706646,0,0,0,0,0.45673551887624,0.517875767294343,1.33597925158342,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0.502666365318702,0,0,0.884610551949874,0.161766849947409,2.42925670306433,0.484875253135222,0,0.585561594023094,1.8850203613211,0,0.479260498023681,0,0,1.64769703345305,0.915001205637253,0.502617408451458,2.60736480288415,2.81287003063364,2.28566849015516,1.94689515681309,0.305518091550949,0.497627882440372,1.26361379216837,0.841767423545896,0,0,0.180062129805349,0,0.408218994907967,0.2562274405697,0.374806898238915,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0.852490498186778,0.207125772535502,0,0.180062061461015,0.23674473558521,0.590292695242212,0.154267112887378,0.232533944750408,1.3413670069981,2.10177616260905,1.31647879930784,0.820837320395476,2.51313309592153,2.92399974850665,2.19550115291051,1.34206418760372,3.99550902271842,0.617427674275707,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0.193952487167626,0.280543279561274,0.189709611372772,0,0,0.123397163921801,0.889357881261447,0,0,0,0,0,0,0,0.648540907100142,0.274561413188081,0,0,0,0.757736633841335,0.896987067609561,0.482443521363367,0,0.189491411770485,0.162964976442026,0,0,0,0.476087281772027,0,0,0,0.478364305972461,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,2.0871576698413,1.05490517932983,0,6.5642441073137,0,0,0,0,0,0,0,0,0,0.963963949265421,0.283880170416537,0.178065603667255,0,0.164970122972535,1.32745138339963,0,0,0,0.885905678642318,0,0,0.363533729477506,0.712994756769443,1.26414703174326,0,3.09406629744561,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0.913394847343798,0,0,0,0.98931751764888,0,0.120625849856312,0.238744688006273,0,0,2.03967832211561,0.170870880797853,0,0.185194527369712,0,0,0.228778173206523,0.679913719975421,0.559805809294632,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.523511883968059,0,3.72803587852155,0,0,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0.241584120826006,0.576060012515731,0,0,0,0,0.179026695667481,0,0.240390899039938,0,0,0.0762068066549998,0,0,0.192423683280659,0,1.13365191807606,0.221985953374065,0.269141569828427,0.167884616364078,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,2.82375921308533,0.460325236507177,1.14579102687879,2.40594455281163,4.11049511862385,0,0.675022500231806,2.2516060161211,1.81256963593682,2.07104124700728,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.187283014939765,0.256100609619477,0.34461281373368,0.476293691283074,0.463537303779422,0.192909220463705,0,0.441596760403192,1.02860775715625,0.354951612318675,0.476872379894642,0.436039249896986,0,0.592302255241736,0.182927972872773,0.263069711437843,0,0.561142271657738,0.474540072496697,0.29551344712669,0,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.57386499620653,1.10295709559758,1.62307484934295 | ||
|short_description=p5@Nt5dc3 | |||
}} | }} |
Latest revision as of 12:48, 26 September 2015
Short description: | p5@Nt5dc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nt5dc3_5end |
Coexpression cluster: | NA |
Association with transcript: | 92bp_to_ENSMUST00000099396, NM_175331, uc007gqn.1_5end |
EntrezGene: | Nt5dc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 3.24e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.07e-11 | 54 |
structure with developmental contribution from neural crest | 8.87e-10 | 92 |
central nervous system | 1.27e-09 | 73 |
regional part of brain | 1.80e-09 | 46 |
nervous system | 3.29e-09 | 75 |
brain | 3.54e-09 | 47 |
future brain | 3.54e-09 | 47 |
occipital lobe | 3.56e-09 | 10 |
visual cortex | 3.56e-09 | 10 |
neocortex | 3.56e-09 | 10 |
neural tube | 5.23e-09 | 52 |
neural rod | 5.23e-09 | 52 |
future spinal cord | 5.23e-09 | 52 |
neural keel | 5.23e-09 | 52 |
anterior neural tube | 1.14e-07 | 40 |
ectoderm-derived structure | 1.21e-07 | 95 |
ectoderm | 1.21e-07 | 95 |
presumptive ectoderm | 1.21e-07 | 95 |
brain grey matter | 2.80e-07 | 29 |
regional part of telencephalon | 2.80e-07 | 29 |
telencephalon | 2.80e-07 | 29 |
raphe nuclei | 3.24e-07 | 3 |
reticular formation | 3.24e-07 | 3 |
regional part of forebrain | 8.14e-07 | 39 |
forebrain | 8.14e-07 | 39 |
future forebrain | 8.14e-07 | 39 |