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FFCP PHASE1:Mm9::chr11:102157932..102157995,-: Difference between revisions

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(Created page with "{{FFCP |id=chr11:102157932..102157995,- |short_description=p4@Atxn7l3 |description=CAGE_peak_4_at_Atxn7l3_5end |association_with_transcript=0bp_to_ENSMUST00000073234,ENSMU...")
 
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{{FFCP
{{FFCP
|id=chr11:102157932..102157995,-
|DHSsupport=NA
|short_description=p4@Atxn7l3
|DPIdataset=NA
|description=CAGE_peak_4_at_Atxn7l3_5end
|association_with_transcript=0bp_to_ENSMUST00000073234,ENSMUST00000107132,NM_001098836,NM_001098837,uc007lrg.1,uc007lrh.1_5end
|EntrezGene=217218
|EntrezGene=217218
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=A2AWT3
|UniProt=A2AWT3
|association_with_transcript=0bp_to_ENSMUST00000073234,ENSMUST00000107132,NM_001098836,NM_001098837,uc007lrg.1,uc007lrh.1_5end
|cluster_id=chr11:102157932..102157995,-
|description=CAGE_peak_4_at_Atxn7l3_5end
|id=chr11:102157932..102157995,-
|ontology_enrichment_celltype=CL:0000117!4.08e-15!23;CL:0000337!4.08e-15!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.15e-15,23;CL:0000337,3.15e-15,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!5.42e-20!52;UBERON:0005068!5.42e-20!52;UBERON:0006241!5.42e-20!52;UBERON:0007135!5.42e-20!52;UBERON:0002020!5.53e-19!34;UBERON:0000955!1.56e-18!50;UBERON:0006238!1.56e-18!50;UBERON:0002616!4.21e-18!49;UBERON:0000033!1.42e-16!63;UBERON:0001017!4.14e-16!73;UBERON:0005743!4.14e-16!73;UBERON:0002791!1.32e-15!29;UBERON:0003528!1.32e-15!29;UBERON:0001893!1.32e-15!29;UBERON:0000073!2.29e-15!75;UBERON:0001016!2.29e-15!75;UBERON:0003080!1.73e-14!40;UBERON:0002780!5.76e-14!39;UBERON:0001890!5.76e-14!39;UBERON:0006240!5.76e-14!39;UBERON:0002346!8.97e-14!71;UBERON:0003075!8.97e-14!71;UBERON:0007284!8.97e-14!71;UBERON:0003056!3.02e-13!49;UBERON:0000956!8.28e-12!21;UBERON:0001869!8.28e-12!21;UBERON:0000203!8.28e-12!21;UBERON:0004121!1.40e-11!102;UBERON:0000924!1.40e-11!102;UBERON:0006601!1.40e-11!102;UBERON:0007811!7.83e-11!86;UBERON:0000153!1.93e-10!94;UBERON:0002619!9.17e-10!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.18e-21,54;UBERON:0001049,3.81e-20,52;UBERON:0005068,3.81e-20,52;UBERON:0006241,3.81e-20,52;UBERON:0007135,3.81e-20,52;UBERON:0002020,3.97e-19,34;UBERON:0000955,1.15e-16,47;UBERON:0006238,1.15e-16,47;UBERON:0001017,1.50e-16,73;UBERON:0002616,3.07e-16,46;UBERON:0002346,4.64e-16,64;UBERON:0003075,4.64e-16,64;UBERON:0007284,4.64e-16,64;UBERON:0001016,8.61e-16,75;UBERON:0003528,1.01e-15,29;UBERON:0002791,1.01e-15,29;UBERON:0001893,1.01e-15,29;UBERON:0003080,1.35e-14,40;UBERON:0002780,4.55e-14,39;UBERON:0001890,4.55e-14,39;UBERON:0006240,4.55e-14,39;UBERON:0010371,4.92e-14,73;UBERON:0003056,2.42e-13,49;UBERON:0004121,4.11e-13,95;UBERON:0000924,4.11e-13,95;UBERON:0006601,4.11e-13,95;UBERON:0000956,6.82e-12,21;UBERON:0001869,6.82e-12,21;UBERON:0000203,6.82e-12,21;UBERON:0002619,7.84e-10,17;UBERON:0010314,1.20e-09,92
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0.674321731924103,1.40510874733071,1.57053565190418,1.94422459937689,1.86401793926078,7.32800820289447,2.24274819065968,2.31641886639937,1.94451188344048,2.84151611651008,2.70329800785245,2.34714477291508,2.0832701575032,1.57289016638566,4.1069300540421,3.74439008135225,0.632022241256357,1.62180172232131,1.43795340030758,1.29920822977795,1.07416017400489,0.993406773906324,2.04332264183947,1.62458479892035,1.11063094942962,1.295515713135,1.00826185136841,1.16949456887703,1.73181314952593,0.818138315270983,0,1.99787358036658,1.88399098879899,2.51826924546118,1.15913756419314,0.93841237725591,1.46521299413812,1.50057865355346,1.00314420807073,5.64751842617067,11.5081309126794,6.87474616127276,5.32744865265431,8.22099023724771,9.06472676867641,12.1504050041725,7.20513925158753,9.9691329976525,12.4262474820437,2.69847103718859,1.99512436700516,3.07320490357441,3.16038732188782,2.93458427679175,3.12533964365024,2.00022055021454,2.47242068686673,2.88827288632634,3.53776096469316,1.77435509923168,1.88626341386076,2.80924522409647,2.62503124859964,3.27382173046996,2.38146845641537,2.31768651889711,4.24400285020151,2.47251540481984,2.64958056241915,1.71434626192708,2.48466128623072,2.14592570952589,2.47088908274958,1.88218760830661,2.36920902096694,2.19513567447327,3.6829759601298,2.98769050460896,0.561142271657738,2.72860541685601,2.56111654176465,4.09231043169689,2.47898945897546,2.12197272079256,2.99772693525535,3.27504251823572,3.22306581072447,1.91288332068843,2.20591419119516,0.695603506861264
|phase1_expression=4.32401887182944,5.23463111459042,3.63999391511629,3.93203474698879,1.50268718983904,1.34303417529512,0.934450562382103,1.54947988129892,2.111830832275,1.63845168425395,3.4243593645101,2.39316476986009,1.02720437958723,1.83582845079895,1.33243904726265,0.404950534779652,0,1.26184866143295,0.274228867211478,1.27316895539409,3.656861476496,1.09220046320974,1.30599894569468,1.43993180514066,0.68822784320151,4.59385571292016,3.01533397311352,2.58565479223067,1.52018735565099,2.01624103807945,1.55211357458713,1.27006134691926,1.23012957516914,0,1.44425809875637,1.32987716286794,1.02084678131185,3.34825304589526,3.906676722619,2.09409497589519,4.1176204162171,2.04913645487534,7.2826552954673,0.377690453926732,1.11514624341466,1.83546752161682,2.34717403304412,2.18025156380447,3.29529274101708,3.11087838518853,2.65974201088189,0,0.838913030288682,0.725362142011344,1.00828139742739,1.54355661621568,2.29226751951005,1.54701627683233,15.3760510253294,13.7537654610729,11.4089652631112,5.08266798103698,2.66788438833342,3.5995988691256,0.988866362566974,2.1314403448383,2.09720077362883,4.61061966385865,7.05089363697648,7.83034442323806,6.30974884054146,16.2821061110168,14.5773237028065,8.81933754347669,14.5685115947719,5.51531271966013,11.0115880999389,18.386976684267,16.1286859919056,14.7712642257817,24.1527379110361,13.022834263919,13.959149950069,4.50210088025344,9.93188610549266,10.9012576625257,16.3727432918968,11.9295645328192,1.28734528666413,1.51143120213571,0.869593466105033,1.72084775396277,0.679971333707751,1.07940638327563,0,0.448026887097336,1.40444420131752,1.70430322578058,2.85764605063156,1.7666978725517,2.53518155598025,5.13305909657271,0,14.2213340630666,0.649473123033642,0.506719730950197,0.505524445014783,1.94112595522402,0.258937883647172,0.742210695324124,1.90833859442749,1.52232739156071,2.7673859670727,1.50722640552623,1.29347577849275,1.50799909595611,3.21353458054686,0.433798070759735,0.884610551949874,1.94120219936891,0.883366073841574,1.93950101254089,0,2.92780797011547,4.60782754989601,0.510914110417183,1.31796636956512,1.19980546198682,1.01656181658452,7.63932260964596,1.83000241127451,9.5497307605777,11.4724051326902,12.5300574091862,6.2336413367868,8.11206315338788,2.24046600470696,0.746441823660558,2.27450482590307,1.26265113531884,1.82168620147785,2.29902104433473,2.70093194708024,1.80845781402858,2.78949646520444,2.562274405697,2.06143794031403,1.29351685369508,2.58681591519411,1.70195472151037,2.63926686245923,2.6303487891309,3.05851974148158,1.0447564995665,1.85203922767149,1.99034266818493,1.40442637462647,1.28673953557358,1.70498099637356,1.24275463521301,1.17263029990548,2.16074473753218,2.60419209143731,1.77087808572663,1.69693824176116,1.16266972375204,1.07309360559848,1.63471479314037,2.13927804887525,0.820837320395476,1.21603214318784,1.16959989940266,0.439100230582101,1.47627060636409,9.2527577368216,7.40913209130848,1.65209391491899,1.58670339998127,2.34617075588757,3.25131340604614,1.67527699718721,1.4117846723634,1.77902435075896,1.52180500890047,0.949058123089023,0.823494773620054,1.50801125280162,1.59165177632921,0.779856348476481,2.69645822596266,1.72910439899755,1.99141273254367,2.84501851429623,2.05647322697512,3.38123207019241,1.22190796707189,0.969762435838129,1.19230893813542,1.20149420536089,0.442830443938806,0.156998727841375,0.987177311374404,0.296452627087149,0.500535317148282,0.393117990226406,0.899448449539415,1.01430060694251,0.964708639009667,1.01850340712568,0.287696137450811,0.486405680325106,0.823684239564244,2.87536413054709,0,0.936113019343682,0.757736633841335,0.358794827043824,1.4473305640901,1.10851914099963,2.84237117655727,1.62964976442026,1.52770577197669,1.87752198630802,1.00503754465089,2.14239276797412,2.73187107000918,1.10344600874334,2.43611158613652,2.71073106717728,0.983179888294428,1.03610989119537,1.15719246865209,3.01582567878545,1.63171705145613,0.983528546038072,2.20749397043786,5.9403718295483,7.14991288212439,1.14754461763673,0.757412781613119,0.631016438832513,0.390438744296638,0.430846795465598,0.238968797952552,0.891194696329576,1.41538265394416,0.404810701674894,0.584511715822624,0.790575555893047,4.17717711348349,0.567760340833074,2.67098405500883,2.76907830901079,1.97964147567043,0,2.42780636154981,1.51161778482376,0.754420319023592,2.65771703592696,0.614870295887855,2.32585463851399,1.09060118843252,2.13898427030833,0.948110273807448,1.05418608574999,0,1.02131881726136,1.44048875225048,2.8458910432206,2.57204442037911,1.41872186913819,1.78368817602071,1.81003922662333,2.43571959291679,1.87737366450968,3.38931313382112,0.661585194164886,1.81374878235628,0.807322133479528,1.74907482291652,1.55184047204077,1.31312719796049,2.33184669303881,8.15871328846243,0.341741761595705,2.27025554759545,1.48155621895769,0.376736914009382,0.820165366326151,1.14389086603261,1.35982743995084,1.25956307091292,0.829199842826543,2.86401185404534,2.05618395827738,2.23651413839534,2.26811215725783,2.29997125615916,1.9652630737156,0.674321731924103,1.40510874733071,1.57053565190418,1.94422459937689,1.86401793926078,7.32800820289447,2.24274819065968,2.31641886639937,1.94451188344048,2.84151611651008,2.70329800785245,2.34714477291508,2.0832701575032,1.57289016638566,4.1069300540421,3.74439008135225,0.632022241256357,1.62180172232131,1.43795340030758,1.29920822977795,1.07416017400489,0.993406773906324,2.04332264183947,1.62458479892035,1.11063094942962,1.295515713135,1.00826185136841,1.16949456887703,1.73181314952593,0.818138315270983,0,1.99787358036658,1.88399098879899,2.51826924546118,1.15913756419314,0.93841237725591,1.46521299413812,1.50057865355346,1.00314420807073,5.64751842617067,11.5081309126794,6.87474616127276,5.32744865265431,8.22099023724771,9.06472676867641,12.1504050041725,7.20513925158753,9.9691329976525,12.4262474820437,2.69847103718859,1.99512436700516,3.07320490357441,3.16038732188782,2.93458427679175,3.12533964365024,2.00022055021454,2.47242068686673,2.88827288632634,3.53776096469316,1.77435509923168,1.88626341386076,2.80924522409647,2.62503124859964,3.27382173046996,2.38146845641537,2.31768651889711,4.24400285020151,2.47251540481984,2.64958056241915,1.71434626192708,2.48466128623072,2.14592570952589,2.47088908274958,1.88218760830661,2.36920902096694,2.19513567447327,3.6829759601298,2.98769050460896,0.561142271657738,2.72860541685601,2.56111654176465,4.09231043169689,2.47898945897546,2.12197272079256,2.99772693525535,3.27504251823572,3.22306581072447,1.91288332068843,2.20591419119516,0.695603506861264
|short_description=p4@Atxn7l3
}}
}}

Latest revision as of 18:07, 26 September 2015

Short description:p4@Atxn7l3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Atxn7l3_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000073234, ENSMUST00000107132, NM_001098836, NM_001098837, uc007lrg.1, uc007lrh.1_5end
EntrezGene:Atxn7l3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Atxn7l3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.23
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.84
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I22.59
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C315.38
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C711.41
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.05
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.83
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.58
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.39
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.13
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F424.15
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.96
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.93
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.37
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.93
Mouse Schwann, donor1.CNhs12507.11728-123D91.29
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A47.64
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F19.55
cortex, adult.CNhs10473.12-14D511.47
cortex, neonate N30.CNhs11107.1392-42F212.53
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B28.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.79
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E89.25
hippocampus, neonate N00.CNhs11228.627-43G17.41
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C25.94
medulla oblongata, neonate N30.CNhs11200.1396-42A37.15
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H31.75
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C98.16
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G57.33
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I52.84
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B72.35
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D91.57
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F82.04
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.52
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I82.70
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.15e-1523
neuroblast (sensu Vertebrata)3.15e-1523

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.18e-2154
neural tube3.81e-2052
neural rod3.81e-2052
future spinal cord3.81e-2052
neural keel3.81e-2052
gray matter3.97e-1934
brain1.15e-1647
future brain1.15e-1647
central nervous system1.50e-1673
regional part of brain3.07e-1646
neurectoderm4.64e-1664
neural plate4.64e-1664
presumptive neural plate4.64e-1664
nervous system8.61e-1675
brain grey matter1.01e-1529
regional part of telencephalon1.01e-1529
telencephalon1.01e-1529
anterior neural tube1.35e-1440
regional part of forebrain4.55e-1439
forebrain4.55e-1439
future forebrain4.55e-1439
ecto-epithelium4.92e-1473
pre-chordal neural plate2.42e-1349
ectoderm-derived structure4.11e-1395
ectoderm4.11e-1395
presumptive ectoderm4.11e-1395
cerebral cortex6.82e-1221
cerebral hemisphere6.82e-1221
pallium6.82e-1221
regional part of cerebral cortex7.84e-1017
structure with developmental contribution from neural crest1.20e-0992
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