FFCP PHASE1:Mm9::chr7:13365956..13366028,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=483|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:13365956..13366028,-|id=chr7:13365956..13366028,-|ontology_enrichment_celltype=CL:0000540!5.60e-10!33;CL:0000047!5.60e-10!33;CL:0000031!5.60e-10!33;CL:0000404!5.60e-10!33;CL:0000117!1.56e-09!23;CL:0000337!1.56e-09!23|ontology_enrichment_celltype_v019_2=CL:0000540,2.57e-10,33;CL:0000047,2.57e-10,33;CL:0000031,2.57e-10,33;CL:0000404,2.57e-10,33;CL:0000117,7.43e-10,23;CL:0000337,7.43e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.87e-17!73;UBERON:0005743!6.87e-17!73;UBERON:0000073!6.18e-16!75;UBERON:0001016!6.18e-16!75;UBERON:0002346!6.95e-16!71;UBERON:0003075!6.95e-16!71;UBERON:0007284!6.95e-16!71;UBERON:0001049!1.85e-15!52;UBERON:0005068!1.85e-15!52;UBERON:0006241!1.85e-15!52;UBERON:0007135!1.85e-15!52;UBERON:0000033!2.13e-15!63;UBERON:0000955!3.42e-15!50;UBERON:0006238!3.42e-15!50;UBERON:0002616!1.33e-14!49;UBERON:0003056!2.70e-14!49;UBERON:0004121!2.56e-13!102;UBERON:0000924!2.56e-13!102;UBERON:0006601!2.56e-13!102;UBERON:0003080!2.83e-13!40;UBERON:0002780!1.30e-12!39;UBERON:0001890!1.30e-12!39;UBERON:0006240!1.30e-12!39;UBERON:0002020!9.18e-12!34;UBERON:0000153!1.69e-11!94;UBERON:0007811!8.13e-10!86;UBERON:0002791!8.84e-10!29;UBERON:0003528!8.84e-10!29;UBERON:0001893!8.84e-10!29|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.91e-18,64;UBERON:0003075,3.91e-18,64;UBERON:0007284,3.91e-18,64;UBERON:0001017,8.37e-18,73;UBERON:0000073,1.82e-17,54;UBERON:0001016,2.11e-16,75;UBERON:0001049,3.85e-16,52;UBERON:0005068,3.85e-16,52;UBERON:0006241,3.85e-16,52;UBERON:0007135,3.85e-16,52;UBERON:0010371,7.63e-15,73;UBERON:0003056,8.95e-15,49;UBERON:0000955,4.83e-14,47;UBERON:0006238,4.83e-14,47;UBERON:0004121,6.87e-14,95;UBERON:0000924,6.87e-14,95;UBERON:0006601,6.87e-14,95;UBERON:0003080,1.04e-13,40;UBERON:0002616,1.91e-13,46;UBERON:0002780,5.05e-13,39;UBERON:0001890,5.05e-13,39;UBERON:0006240,5.05e-13,39;UBERON:0002020,3.87e-12,34;UBERON:0010314,4.50e-12,92;UBERON:0003528,4.46e-10,29;UBERON:0002791,4.46e-10,29;UBERON:0001893,4.46e-10,29|phase1_expression=5.2849119544582,0,0,0,0,0.16787927191189,0.233612640595526,1.54947988129892,4.22366166455,3.7450324211519,1.19852577757853,2.31339261086476,0.856003649656029,1.74840804837995,0.666219523631325,0,0,0.630924330716475,1.09691546884591,0,5.78294373027274,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0.166234645358492,0,0,0.7813353445238,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.279972843250725,0,1.34226084846189,0,3.02484419228218,0.514518872071894,0.85960031981627,0.515672092277442,8.49729135610311,14.8117474196169,4.43681982454325,0,0,0.449949858640699,0.988866362566974,0,0,0.384218305321555,4.56234294157302,5.53524347159932,4.20649922702764,4.85606673486466,5.30084498283872,5.26710436624302,5.94241920313065,6.43453150627015,11.0115880999389,11.7472351038373,12.595735727012,10.4190167306853,13.9976094711687,17.1901412283731,4.74611098302348,12.380777420697,13.5990440521361,15.6153150301044,14.6642831223076,13.2343606535963,0.530083353332288,0.982430281388212,4.34796733052517,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,4.22530259330042,0,0,0,0,0,0.505524445014783,0.91347103775248,1.8125651855302,2.9688427812965,2.77576522825817,2.43572382649713,0.691846491768175,1.50722640552623,5.05631440683531,1.0053327306374,0.494389935468748,0.86759614151947,0,2.75003644910596,0.220841518460394,0.484875253135222,0,7.90508151931177,3.35114730901528,0,8.14742846640258,5.99902730993408,8.13249453267614,19.9221550408414,10.0650132620098,15.2041766056566,10.7771078519211,7.67146371990992,14.5451631191692,10.058958310201,5.39748628406676,1.8661045591514,6.31806896084187,2.52530227063769,5.85541993332167,3.21862946206862,5.04173963454978,6.17889753126432,5.78310242786287,6.02134485338794,5.34099829990454,4.9153640440413,6.25147179505242,7.37513712654495,7.74184946321375,5.47989331068937,8.06337022754234,2.78601733217733,5.76189981942242,6.17006227137329,3.51106593656617,5.91900186363845,4.26245249093389,4.76389276831654,6.3322036194896,5.58192390529146,4.7348947117042,3.73852040320067,3.08534225774756,1.62773761325285,1.87791380979733,1.40118410840603,2.13927804887525,0.656669856316381,1.05389452409612,0.877199924551994,0.439100230582101,0.268412837520744,10.7247873767705,10.2904612379284,0,0.264450566663544,8.31824177087412,4.64473343720877,3.8660238396628,2.01683524623343,0.667134131534611,1.71203063501303,0,0.988193728344065,0.754005626400808,0.596869416123452,0.779856348476481,0,0.432276099749388,0.199141273254367,5.31070122668629,5.02693455482807,9.01661885384643,4.48032921259691,5.43066964069352,4.06787755363848,1.89709611372772,1.77132177575523,0.627994911365499,0.740382983530803,0,1.00107063429656,0.589676985339609,0.674586337154561,0.608580364165509,0,0,0.863088412352432,0.324270453550071,0,0,0.372140947668503,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=483 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:13365956..13366028,- | |||
|description=CAGE_peak_at_chr7:13365956..13366028,- | |||
|id=chr7:13365956..13366028,- | |||
|ontology_enrichment_celltype=CL:0000540!5.60e-10!33;CL:0000047!5.60e-10!33;CL:0000031!5.60e-10!33;CL:0000404!5.60e-10!33;CL:0000117!1.56e-09!23;CL:0000337!1.56e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.57e-10,33;CL:0000047,2.57e-10,33;CL:0000031,2.57e-10,33;CL:0000404,2.57e-10,33;CL:0000117,7.43e-10,23;CL:0000337,7.43e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.87e-17!73;UBERON:0005743!6.87e-17!73;UBERON:0000073!6.18e-16!75;UBERON:0001016!6.18e-16!75;UBERON:0002346!6.95e-16!71;UBERON:0003075!6.95e-16!71;UBERON:0007284!6.95e-16!71;UBERON:0001049!1.85e-15!52;UBERON:0005068!1.85e-15!52;UBERON:0006241!1.85e-15!52;UBERON:0007135!1.85e-15!52;UBERON:0000033!2.13e-15!63;UBERON:0000955!3.42e-15!50;UBERON:0006238!3.42e-15!50;UBERON:0002616!1.33e-14!49;UBERON:0003056!2.70e-14!49;UBERON:0004121!2.56e-13!102;UBERON:0000924!2.56e-13!102;UBERON:0006601!2.56e-13!102;UBERON:0003080!2.83e-13!40;UBERON:0002780!1.30e-12!39;UBERON:0001890!1.30e-12!39;UBERON:0006240!1.30e-12!39;UBERON:0002020!9.18e-12!34;UBERON:0000153!1.69e-11!94;UBERON:0007811!8.13e-10!86;UBERON:0002791!8.84e-10!29;UBERON:0003528!8.84e-10!29;UBERON:0001893!8.84e-10!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.91e-18,64;UBERON:0003075,3.91e-18,64;UBERON:0007284,3.91e-18,64;UBERON:0001017,8.37e-18,73;UBERON:0000073,1.82e-17,54;UBERON:0001016,2.11e-16,75;UBERON:0001049,3.85e-16,52;UBERON:0005068,3.85e-16,52;UBERON:0006241,3.85e-16,52;UBERON:0007135,3.85e-16,52;UBERON:0010371,7.63e-15,73;UBERON:0003056,8.95e-15,49;UBERON:0000955,4.83e-14,47;UBERON:0006238,4.83e-14,47;UBERON:0004121,6.87e-14,95;UBERON:0000924,6.87e-14,95;UBERON:0006601,6.87e-14,95;UBERON:0003080,1.04e-13,40;UBERON:0002616,1.91e-13,46;UBERON:0002780,5.05e-13,39;UBERON:0001890,5.05e-13,39;UBERON:0006240,5.05e-13,39;UBERON:0002020,3.87e-12,34;UBERON:0010314,4.50e-12,92;UBERON:0003528,4.46e-10,29;UBERON:0002791,4.46e-10,29;UBERON:0001893,4.46e-10,29 | |||
|phase1_expression=5.2849119544582,0,0,0,0,0.16787927191189,0.233612640595526,1.54947988129892,4.22366166455,3.7450324211519,1.19852577757853,2.31339261086476,0.856003649656029,1.74840804837995,0.666219523631325,0,0,0.630924330716475,1.09691546884591,0,5.78294373027274,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0.166234645358492,0,0,0.7813353445238,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.279972843250725,0,1.34226084846189,0,3.02484419228218,0.514518872071894,0.85960031981627,0.515672092277442,8.49729135610311,14.8117474196169,4.43681982454325,0,0,0.449949858640699,0.988866362566974,0,0,0.384218305321555,4.56234294157302,5.53524347159932,4.20649922702764,4.85606673486466,5.30084498283872,5.26710436624302,5.94241920313065,6.43453150627015,11.0115880999389,11.7472351038373,12.595735727012,10.4190167306853,13.9976094711687,17.1901412283731,4.74611098302348,12.380777420697,13.5990440521361,15.6153150301044,14.6642831223076,13.2343606535963,0.530083353332288,0.982430281388212,4.34796733052517,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,4.22530259330042,0,0,0,0,0,0.505524445014783,0.91347103775248,1.8125651855302,2.9688427812965,2.77576522825817,2.43572382649713,0.691846491768175,1.50722640552623,5.05631440683531,1.0053327306374,0.494389935468748,0.86759614151947,0,2.75003644910596,0.220841518460394,0.484875253135222,0,7.90508151931177,3.35114730901528,0,8.14742846640258,5.99902730993408,8.13249453267614,19.9221550408414,10.0650132620098,15.2041766056566,10.7771078519211,7.67146371990992,14.5451631191692,10.058958310201,5.39748628406676,1.8661045591514,6.31806896084187,2.52530227063769,5.85541993332167,3.21862946206862,5.04173963454978,6.17889753126432,5.78310242786287,6.02134485338794,5.34099829990454,4.9153640440413,6.25147179505242,7.37513712654495,7.74184946321375,5.47989331068937,8.06337022754234,2.78601733217733,5.76189981942242,6.17006227137329,3.51106593656617,5.91900186363845,4.26245249093389,4.76389276831654,6.3322036194896,5.58192390529146,4.7348947117042,3.73852040320067,3.08534225774756,1.62773761325285,1.87791380979733,1.40118410840603,2.13927804887525,0.656669856316381,1.05389452409612,0.877199924551994,0.439100230582101,0.268412837520744,10.7247873767705,10.2904612379284,0,0.264450566663544,8.31824177087412,4.64473343720877,3.8660238396628,2.01683524623343,0.667134131534611,1.71203063501303,0,0.988193728344065,0.754005626400808,0.596869416123452,0.779856348476481,0,0.432276099749388,0.199141273254367,5.31070122668629,5.02693455482807,9.01661885384643,4.48032921259691,5.43066964069352,4.06787755363848,1.89709611372772,1.77132177575523,0.627994911365499,0.740382983530803,0,1.00107063429656,0.589676985339609,0.674586337154561,0.608580364165509,0,0,0.863088412352432,0.324270453550071,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,2.40179147216586,4.9267767060326,4.4000543639347,4.58311731593008,3.98973422090454,1.67506257441816,1.90434912708811,1.17080188714679,3.15270288212382,1.7717175171902,2.23236676120482,1.63863314715738,1.55416483679306,0.578596234326046,0,1.08781136763742,0.491764273019036,0.551873492609465,10.7568895291821,8.90808818100744,0,0.252470927204373,5.36363973007636,5.46614242015294,6.46270193198397,5.73525115086125,4.23317480756549,5.37845408498782,2.42886421004937,3.79932615284705,3.95287777946523,12.2102100240287,3.40656204499845,5.69809931735217,5.53815661802159,4.28922319728592,0,4.12727081463468,1.81394134178851,1.50884063804718,1.18120757152309,0.922305443831782,1.29214146584111,0.363533729477506,2.49548164869305,0.316036757935816,0,1.03135543248187,6.80879211507576,6.48219938512717,6.33857550535497,4.07240366560025,7.62563004661776,6.42127743367454,5.75921572107423,3.34911444026059,0.469343416127421,1.27099242518292,1.32317038832977,1.6488625294148,3.39075296061402,1.62844897306021,0.954978752025092,0.984845398470368,1.45740418314925,9.45669040253599,0.683483523191411,3.09580301944834,2.59272338317596,0.188368457004691,0.683471138605126,0.686334519619568,9.85874893964361,8.95689294871411,12.0233977209849,0,7.27572785236611,4.87966721104437,3.67218158794124,4.18176592028937,1.52853794622324,2.15782954215713,2.0663363931334,0.523511883968059,0.777689839750757,0,9.01908701894705,8.52244312450679,6.9492565991981,9.91701060554643,8.13706887909706,6.9272011451219,6.92407708009948,7.16124116641726,10.171356409294,13.5287107662563,13.2493802878618,1.26404448251271,2.8381530140623,1.64337531463724,1.16928740680016,1.43221356533985,0.993406773906324,1.80293174279953,1.47689527174577,1.81739609906666,2.209997392995,2.31900225814733,1.46186821109629,1.53938946624527,3.03879945672079,2.0405734525369,1.99787358036658,1.07656627931371,1.67884616364078,2.12508553435409,0.750729901804728,1.46521299413812,1.07184189539533,1.00314420807073,7.34177395402186,7.82552902062201,6.87474616127276,4.64003592327956,9.59115527678899,9.82012066606611,4.72515750162264,14.8605997063993,12.2348450425735,12.42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| |||
|short_description=p@chr7:13365956..13366028,- | |||
}} |
Latest revision as of 05:21, 4 August 2015
Short description: | p@chr7:13365956..13366028, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:13365956..13366028, - |
Coexpression cluster: | MCL_coexpression_mm9:483 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.57e-10 | 33 |
neuronal stem cell | 2.57e-10 | 33 |
neuroblast | 2.57e-10 | 33 |
electrically signaling cell | 2.57e-10 | 33 |
CNS neuron (sensu Vertebrata) | 7.43e-10 | 23 |
neuroblast (sensu Vertebrata) | 7.43e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.91e-18 | 64 |
neural plate | 3.91e-18 | 64 |
presumptive neural plate | 3.91e-18 | 64 |
central nervous system | 8.37e-18 | 73 |
regional part of nervous system | 1.82e-17 | 54 |
nervous system | 2.11e-16 | 75 |
neural tube | 3.85e-16 | 52 |
neural rod | 3.85e-16 | 52 |
future spinal cord | 3.85e-16 | 52 |
neural keel | 3.85e-16 | 52 |
ecto-epithelium | 7.63e-15 | 73 |
pre-chordal neural plate | 8.95e-15 | 49 |
brain | 4.83e-14 | 47 |
future brain | 4.83e-14 | 47 |
ectoderm-derived structure | 6.87e-14 | 95 |
ectoderm | 6.87e-14 | 95 |
presumptive ectoderm | 6.87e-14 | 95 |
anterior neural tube | 1.04e-13 | 40 |
regional part of brain | 1.91e-13 | 46 |
regional part of forebrain | 5.05e-13 | 39 |
forebrain | 5.05e-13 | 39 |
future forebrain | 5.05e-13 | 39 |
gray matter | 3.87e-12 | 34 |
structure with developmental contribution from neural crest | 4.50e-12 | 92 |
brain grey matter | 4.46e-10 | 29 |
regional part of telencephalon | 4.46e-10 | 29 |
telencephalon | 4.46e-10 | 29 |