FFCP PHASE1:Mm9::chr11:116971265..116971276,+: Difference between revisions
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|id=chr11:116971265..116971276,+
|short_description=p@chr11:116971265..116971276,+
|description=CAGE_peak_at_chr11:116971265..116971276,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:116971265..116971276,+ | |||
|description=CAGE_peak_at_chr11:116971265..116971276,+ | |||
|id=chr11:116971265..116971276,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.70e-17!32;CL:0002032!1.70e-17!32;CL:0000037!1.70e-17!32;CL:0000566!1.70e-17!32;CL:0000837!1.70e-17!32;CL:0000738!2.48e-13!17;CL:0002087!2.48e-13!17;CL:0000838!3.61e-13!12;CL:0000624!6.80e-13!8;CL:0002320!2.61e-12!46;CL:0000134!2.61e-12!46;CL:0000542!5.19e-12!13;CL:0000051!5.19e-12!13;CL:0002031!8.71e-12!25;CL:0000084!2.30e-11!11;CL:0000827!2.30e-11!11;CL:0000791!2.52e-11!9;CL:0000789!2.52e-11!9;CL:0002420!2.52e-11!9;CL:0002419!2.52e-11!9;CL:0000790!2.52e-11!9;CL:0000219!8.67e-10!54;CL:0000893!6.50e-09!6;CL:0002489!6.50e-09!6;CL:0000898!6.50e-09!6;CL:0000809!6.50e-09!6;CL:0000810!6.50e-09!6;CL:0000895!6.50e-09!6;CL:0000808!6.50e-09!6;CL:0000894!6.50e-09!6;CL:0000806!6.50e-09!6;CL:0000807!6.50e-09!6;CL:0000805!6.50e-09!6;CL:0002425!6.50e-09!6;CL:0002436!6.50e-09!6;CL:0002427!6.50e-09!6;CL:0002428!6.50e-09!6;CL:0002429!6.50e-09!6;CL:0002433!6.50e-09!6;CL:0002431!6.50e-09!6;CL:0002432!6.50e-09!6;CL:0000063!4.65e-08!66;CL:0000034!6.13e-08!97;CL:0000049!1.93e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.47e-14,12;CL:0000738,8.23e-14,17;CL:0002087,8.23e-14,17;CL:0000624,1.22e-13,8;CL:0000542,8.64e-13,13;CL:0000051,8.64e-13,13;CL:0000791,3.71e-12,9;CL:0000789,3.71e-12,9;CL:0002420,3.71e-12,9;CL:0002419,3.71e-12,9;CL:0000790,3.71e-12,9;CL:0000084,5.36e-10,11;CL:0000827,5.36e-10,11;CL:0002031,2.60e-09,25;CL:0000815,3.50e-08,1;CL:0000792,3.50e-08,1;CL:0000945,7.68e-08,1;CL:0000236,7.68e-08,1;CL:0000826,7.68e-08,1;CL:0000213,8.96e-08,1;CL:0002078,8.96e-08,1;CL:0000115,8.96e-08,1;CL:0002262,8.96e-08,1;CL:1000398,8.96e-08,1;CL:0000355,1.69e-07,9;CL:0000988,3.29e-07,32;CL:0002032,3.29e-07,32;CL:0000037,3.29e-07,32;CL:0000837,3.29e-07,32 | |||
|ontology_enrichment_disease=DOID:0060100!6.58e-08!3;DOID:4045!6.58e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.44e-21,3;DOID:4045,2.44e-21,3;DOID:0050686,5.52e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.61e-12!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,8.96e-08,1;UBERON:0001281,8.96e-08,1;UBERON:0000353,8.96e-08,1;UBERON:0003497,8.96e-08,1;UBERON:0003909,8.96e-08,1;UBERON:0003928,8.96e-08,1;UBERON:0003835,8.96e-08,1;UBERON:0003513,8.96e-08,1;UBERON:0001280,8.96e-08,1;UBERON:0004647,8.96e-08,1;UBERON:0002294,8.96e-08,1;UBERON:0001173,8.96e-08,1;UBERON:0004912,8.96e-08,1;UBERON:0005171,8.96e-08,1;UBERON:0001134,1.69e-07,9;UBERON:0002036,1.69e-07,9;UBERON:0002385,1.69e-07,9;UBERON:0000486,1.69e-07,9;UBERON:0007503,1.69e-07,9;UBERON:0001015,1.69e-07,9;UBERON:0002329,1.69e-07,9;UBERON:0003082,1.69e-07,9;UBERON:0003059,1.69e-07,9;UBERON:0007282,1.69e-07,9;UBERON:0004290,1.69e-07,9;UBERON:0009618,1.69e-07,9;UBERON:0000383,8.50e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,3.74457637980571,1.12630977721333,2.10658073689794,0.171217968225505,0,0.684802919724823,0.437102012094987,0,0,0,0,0.274228867211478,0.42438965179803,0,0.0992909512008853,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,12.9744805528441,3.1253413780952,12.0410461113974,124.705075462575,24.589637458504,22.8189865924642,0,0,0,0,0,0,0,0,0,1.17447824240415,2.17608642603403,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0,0.370389054739423,0,0,0,0.339956859987711,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,3.74457637980571,1.12630977721333,2.10658073689794,0.171217968225505,0,0.684802919724823,0.437102012094987,0,0,0,0,0.274228867211478,0.42438965179803,0,0.0992909512008853,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,12.9744805528441,3.1253413780952,12.0410461113974,124.705075462575,24.589637458504,22.8189865924642,0,0,0,0,0,0,0,0,0,1.17447824240415,2.17608642603403,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0,0.370389054739423,0,0,0,0.339956859987711,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p@chr11:116971265..116971276,+ | |||
}} | }} |
Latest revision as of 12:44, 5 August 2015
Short description: | p@chr11:116971265..116971276, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:116971265..116971276, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.47e-14 | 12 |
leukocyte | 8.23e-14 | 17 |
nongranular leukocyte | 8.23e-14 | 17 |
CD4-positive, alpha-beta T cell | 1.22e-13 | 8 |
lymphocyte | 8.64e-13 | 13 |
common lymphoid progenitor | 8.64e-13 | 13 |
mature alpha-beta T cell | 3.71e-12 | 9 |
alpha-beta T cell | 3.71e-12 | 9 |
immature T cell | 3.71e-12 | 9 |
mature T cell | 3.71e-12 | 9 |
immature alpha-beta T cell | 3.71e-12 | 9 |
T cell | 5.36e-10 | 11 |
pro-T cell | 5.36e-10 | 11 |
hematopoietic lineage restricted progenitor cell | 2.60e-09 | 25 |
regulatory T cell | 3.50e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.50e-08 | 1 |
lymphocyte of B lineage | 7.68e-08 | 1 |
B cell | 7.68e-08 | 1 |
pro-B cell | 7.68e-08 | 1 |
lining cell | 8.96e-08 | 1 |
meso-epithelial cell | 8.96e-08 | 1 |
endothelial cell | 8.96e-08 | 1 |
endothelial cell of sinusoid | 8.96e-08 | 1 |
endothelial cell of hepatic sinusoid | 8.96e-08 | 1 |
multi-potent skeletal muscle stem cell | 1.69e-07 | 9 |
hematopoietic cell | 3.29e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.29e-07 | 32 |
hematopoietic stem cell | 3.29e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.29e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
bile duct | 8.96e-08 | 1 |
hepatic sinusoid | 8.96e-08 | 1 |
parenchyma | 8.96e-08 | 1 |
abdomen blood vessel | 8.96e-08 | 1 |
sinusoid | 8.96e-08 | 1 |
digestive system duct | 8.96e-08 | 1 |
abdominal segment blood vessel | 8.96e-08 | 1 |
trunk blood vessel | 8.96e-08 | 1 |
liver parenchyma | 8.96e-08 | 1 |
liver lobule | 8.96e-08 | 1 |
biliary system | 8.96e-08 | 1 |
biliary tree | 8.96e-08 | 1 |
biliary bud | 8.96e-08 | 1 |
hepatic duct | 8.96e-08 | 1 |
skeletal muscle tissue | 1.69e-07 | 9 |
striated muscle tissue | 1.69e-07 | 9 |
muscle tissue | 1.69e-07 | 9 |
multilaminar epithelium | 1.69e-07 | 9 |
epithelial vesicle | 1.69e-07 | 9 |
musculature | 1.69e-07 | 9 |
somite | 1.69e-07 | 9 |
myotome | 1.69e-07 | 9 |
presomitic mesoderm | 1.69e-07 | 9 |
presumptive segmental plate | 1.69e-07 | 9 |
dermomyotome | 1.69e-07 | 9 |
trunk paraxial mesoderm | 1.69e-07 | 9 |
musculature of body | 8.50e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.44e-21 | 3 |
muscle cancer | 2.44e-21 | 3 |
organ system cancer | 5.52e-11 | 6 |