FFCP PHASE1:Mm9::chr8:73332330..73332373,+: Difference between revisions
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{{FFCP|EntrezGene=16161|HGNC=|MCL_coexpression_id=928|UniProt=Q60837,Q6PG56|association_with_transcript=0bp_to_ENSMUST00000000808,NM_008353,uc009mbr.2,uc012gfi.1_5end|description=CAGE_peak_1_at_Il12rb1_5end|id=chr8:73332330..73332373,+|ontology_enrichment_celltype=CL:0000838!2.45e-08!12;CL:0000084!5.54e-08!11;CL:0000827!5.54e-08!11;CL:0000542!2.76e-07!13;CL:0000051!2.76e-07!13;CL:0000791!6.90e-07!9;CL:0000789!6.90e-07!9;CL:0002420!6.90e-07!9;CL:0002419!6.90e-07!9;CL:0000790!6.90e-07!9|ontology_enrichment_celltype_v019_2=CL:0000084,6.62e-13,11;CL:0000827,6.62e-13,11;CL:0000838,1.24e-11,12;CL:0000791,1.22e-10,9;CL:0000789,1.22e-10,9;CL:0002420,1.22e-10,9;CL:0002419,1.22e-10,9;CL:0000790,1.22e-10,9;CL:0000542,1.48e-10,13;CL:0000051,1.48e-10,13;CL:0000624,3.11e-09,8;CL:0000988,8.43e-09,32;CL:0002032,8.43e-09,32;CL:0000037,8.43e-09,32;CL:0000837,8.43e-09,32;CL:0002031,5.52e-08,25;CL:0000738,1.54e-07,17;CL:0002087,1.54e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.66e-14!29;UBERON:0002193!7.89e-14!48;UBERON:0003408!1.22e-12!24;UBERON:0002390!1.73e-12!45;UBERON:0003061!1.73e-12!45;UBERON:0002370!3.92e-12!23;UBERON:0000974!3.92e-12!23;UBERON:0004807!3.92e-12!23;UBERON:0005058!3.92e-12!23;UBERON:0003351!3.92e-12!23;UBERON:0009113!3.92e-12!23;UBERON:0003295!3.92e-12!23;UBERON:0009722!3.92e-12!23;UBERON:0005562!3.92e-12!23;UBERON:0007690!3.92e-12!23;UBERON:0006562!3.36e-11!24;UBERON:0001557!3.36e-11!24;UBERON:0001042!3.36e-11!24;UBERON:0008814!3.36e-11!24;UBERON:0009145!3.36e-11!24;UBERON:0002405!1.56e-09!70;UBERON:0000063!2.45e-09!35;UBERON:0001004!3.91e-09!42;UBERON:0000072!7.18e-09!27;UBERON:0000065!1.08e-08!41;UBERON:0004119!3.02e-08!130;UBERON:0000925!3.02e-08!130;UBERON:0006595!3.02e-08!130;UBERON:0005057!3.84e-08!51;UBERON:0001007!4.20e-08!128;UBERON:0001555!4.20e-08!128;UBERON:0007026!4.20e-08!128;UBERON:0004921!1.38e-07!126;UBERON:0004185!1.38e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0003408,5.05e-25,24;UBERON:0002370,5.77e-24,23;UBERON:0000974,5.77e-24,23;UBERON:0004807,5.77e-24,23;UBERON:0005058,5.77e-24,23;UBERON:0003351,5.77e-24,23;UBERON:0009113,5.77e-24,23;UBERON:0003295,5.77e-24,23;UBERON:0009722,5.77e-24,23;UBERON:0005562,5.77e-24,23;UBERON:0007690,5.77e-24,23;UBERON:0006562,1.01e-22,24;UBERON:0001557,1.01e-22,24;UBERON:0001042,1.01e-22,24;UBERON:0008814,1.01e-22,24;UBERON:0009145,1.01e-22,24;UBERON:0004177,1.39e-19,29;UBERON:0005057,1.39e-19,29;UBERON:0000072,1.52e-19,27;UBERON:0000077,6.40e-17,35;UBERON:0002193,2.98e-16,48;UBERON:0002405,2.98e-16,48;UBERON:0002390,4.23e-16,45;UBERON:0003061,4.23e-16,45;UBERON:0007811,1.16e-14,36;UBERON:0001004,2.19e-14,42;UBERON:0000065,1.56e-13,41;UBERON:0000153,2.47e-11,43;UBERON:0003929,7.50e-07,55|phase1_expression=0,0,0,0,0.500895729946347,0,0,9.42600261123507,1.97104211012333,6.08567768437183,3.08192342805909,3.98860794976682,0.684802919724823,1.04904482902797,0.333109761815663,0.404950534779652,0,3.78554598429885,2.19383093769182,3.39511721438424,0.425216450755349,1.98581902401771,1.30599894569468,0.47997726838022,0.91763712426868,0,0,0,0.380046838912748,1.26015064879965,1.77384408524244,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,2.17608642603403,4.36921938885203,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0.571301968807607,0.662605622854841,0,0,0,1.10115880999389,0.255374676170375,0.307213066512487,0,0,0,0,0,0.916789486660861,0.294628585473668,0.142371680799103,0,0.908714319998209,0.453429360640713,0,0.860423876981386,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.1418387971906,5.43769555659061,0.593768556259299,0,0.608930956624282,0.230615497256059,0,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0,0.220841518460394,0,0,0.585561594023094,1.04723353406728,2.81002760729451,2.63593273913025,1.19980546198682,0.762421362438388,1.04853447583376,0.457500602818626,0,0,1.53429274398198,1.0389402227978,2.59586020908412,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0.702213187313235,0,1.70498099637356,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0.146199987425332,0.219550115291051,0.134206418760372,0.420579897128254,0,3.96502539580558,0.793351699990633,0,0,0.257734922644187,0.80673409849337,0.667134131534611,0.190225626112559,1.89811624617805,0.823494773620054,1.25667604400135,0.596869416123452,0.779856348476481,1.79763881730844,1.94524244887225,0.796565093017469,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0.224862112384854,0,0,0,0,0.324270453550071,0.823684239564244,0,0.744281895337007,0.624075346229121,0.252578877947112,0.358794827043824,0,1.66277871149944,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0,0.472905432318573,0.44292937929755,0.478364305972461,0.327726629431476,0.518054945597687,1.3018415272336,0,0,0,0.275936746304732,1.28440471990234,4.57125577709592,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0.321321316421807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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16161 | |||
|HGNC= | |||
|MCL_coexpression_id=928 | |||
|TSSclassifier=NA | |||
|UniProt=Q60837,Q6PG56 | |||
|association_with_transcript=0bp_to_ENSMUST00000000808,NM_008353,uc009mbr.2,uc012gfi.1_5end | |||
|cluster_id=chr8:73332330..73332373,+ | |||
|description=CAGE_peak_1_at_Il12rb1_5end | |||
|id=chr8:73332330..73332373,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.45e-08!12;CL:0000084!5.54e-08!11;CL:0000827!5.54e-08!11;CL:0000542!2.76e-07!13;CL:0000051!2.76e-07!13;CL:0000791!6.90e-07!9;CL:0000789!6.90e-07!9;CL:0002420!6.90e-07!9;CL:0002419!6.90e-07!9;CL:0000790!6.90e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.62e-13,11;CL:0000827,6.62e-13,11;CL:0000838,1.24e-11,12;CL:0000791,1.22e-10,9;CL:0000789,1.22e-10,9;CL:0002420,1.22e-10,9;CL:0002419,1.22e-10,9;CL:0000790,1.22e-10,9;CL:0000542,1.48e-10,13;CL:0000051,1.48e-10,13;CL:0000624,3.11e-09,8;CL:0000988,8.43e-09,32;CL:0002032,8.43e-09,32;CL:0000037,8.43e-09,32;CL:0000837,8.43e-09,32;CL:0002031,5.52e-08,25;CL:0000738,1.54e-07,17;CL:0002087,1.54e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.66e-14!29;UBERON:0002193!7.89e-14!48;UBERON:0003408!1.22e-12!24;UBERON:0002390!1.73e-12!45;UBERON:0003061!1.73e-12!45;UBERON:0002370!3.92e-12!23;UBERON:0000974!3.92e-12!23;UBERON:0004807!3.92e-12!23;UBERON:0005058!3.92e-12!23;UBERON:0003351!3.92e-12!23;UBERON:0009113!3.92e-12!23;UBERON:0003295!3.92e-12!23;UBERON:0009722!3.92e-12!23;UBERON:0005562!3.92e-12!23;UBERON:0007690!3.92e-12!23;UBERON:0006562!3.36e-11!24;UBERON:0001557!3.36e-11!24;UBERON:0001042!3.36e-11!24;UBERON:0008814!3.36e-11!24;UBERON:0009145!3.36e-11!24;UBERON:0002405!1.56e-09!70;UBERON:0000063!2.45e-09!35;UBERON:0001004!3.91e-09!42;UBERON:0000072!7.18e-09!27;UBERON:0000065!1.08e-08!41;UBERON:0004119!3.02e-08!130;UBERON:0000925!3.02e-08!130;UBERON:0006595!3.02e-08!130;UBERON:0005057!3.84e-08!51;UBERON:0001007!4.20e-08!128;UBERON:0001555!4.20e-08!128;UBERON:0007026!4.20e-08!128;UBERON:0004921!1.38e-07!126;UBERON:0004185!1.38e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,5.05e-25,24;UBERON:0002370,5.77e-24,23;UBERON:0000974,5.77e-24,23;UBERON:0004807,5.77e-24,23;UBERON:0005058,5.77e-24,23;UBERON:0003351,5.77e-24,23;UBERON:0009113,5.77e-24,23;UBERON:0003295,5.77e-24,23;UBERON:0009722,5.77e-24,23;UBERON:0005562,5.77e-24,23;UBERON:0007690,5.77e-24,23;UBERON:0006562,1.01e-22,24;UBERON:0001557,1.01e-22,24;UBERON:0001042,1.01e-22,24;UBERON:0008814,1.01e-22,24;UBERON:0009145,1.01e-22,24;UBERON:0004177,1.39e-19,29;UBERON:0005057,1.39e-19,29;UBERON:0000072,1.52e-19,27;UBERON:0000077,6.40e-17,35;UBERON:0002193,2.98e-16,48;UBERON:0002405,2.98e-16,48;UBERON:0002390,4.23e-16,45;UBERON:0003061,4.23e-16,45;UBERON:0007811,1.16e-14,36;UBERON:0001004,2.19e-14,42;UBERON:0000065,1.56e-13,41;UBERON:0000153,2.47e-11,43;UBERON:0003929,7.50e-07,55 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,9.42600261123507,1.97104211012333,6.08567768437183,3.08192342805909,3.98860794976682,0.684802919724823,1.04904482902797,0.333109761815663,0.404950534779652,0,3.78554598429885,2.19383093769182,3.39511721438424,0.425216450755349,1.98581902401771,1.30599894569468,0.47997726838022,0.91763712426868,0,0,0,0.380046838912748,1.26015064879965,1.77384408524244,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,2.17608642603403,4.36921938885203,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0.571301968807607,0.662605622854841,0,0,0,1.10115880999389,0.255374676170375,0.307213066512487,0,0,0,0,0,0.916789486660861,0.294628585473668,0.142371680799103,0,0.908714319998209,0.453429360640713,0,0.860423876981386,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.1418387971906,5.43769555659061,0.593768556259299,0,0.608930956624282,0.230615497256059,0,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0,0.220841518460394,0,0,0.585561594023094,1.04723353406728,2.81002760729451,2.63593273913025,1.19980546198682,0.762421362438388,1.04853447583376,0.457500602818626,0,0,1.53429274398198,1.0389402227978,2.59586020908412,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0.702213187313235,0,1.70498099637356,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0.146199987425332,0.219550115291051,0.134206418760372,0.420579897128254,0,3.96502539580558,0.793351699990633,0,0,0.257734922644187,0.80673409849337,0.667134131534611,0.190225626112559,1.89811624617805,0.823494773620054,1.25667604400135,0.596869416123452,0.779856348476481,1.79763881730844,1.94524244887225,0.796565093017469,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0.224862112384854,0,0,0,0,0.324270453550071,0.823684239564244,0,0.744281895337007,0.624075346229121,0.252578877947112,0.358794827043824,0,1.66277871149944,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0,0.472905432318573,0.44292937929755,0.478364305972461,0.327726629431476,0.518054945597687,1.3018415272336,0,0,0,0.275936746304732,1.28440471990234,4.57125577709592,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0.321321316421807,0.567760340833074,0,0,0.329940245945071,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58138878870081,0,0.220528398054962,0.49465875882444,0,0.0603129249281559,0,0.164140899745061,0.291480836629851,1.11255181206306,0.854354403989263,0.619160603889667,0.555583582109135,0.753473828018764,1.0935538217682,0.686334519619568,4.24946074984638,3.07893195112048,5.2515990045681,0,0,0,0.216010681643603,0.209088296014469,0,0.269728692769641,0.495920734352016,0,0.777689839750757,1.24267862617385,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0,6.95224465381992,3.24360344464263,4.00572732942826,5.84643703400078,8.05620130503666,8.14593554603186,7.93289966831794,7.23678683155428,6.15895344683701,8.00171469877498,4.7388307014315,6.52967800956341,7.88937101450702,11.6876902181569,0,0,0,0,0,1.68914227906064,0,0.214368379079066,1.00314420807073,0.564751842617067,0.460325236507177,1.14579102687879,0.859265911718438,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0.407412341537585,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p1@Il12rb1 | |||
}} |
Latest revision as of 18:01, 25 September 2015
Short description: | p1@Il12rb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Il12rb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:928 |
Association with transcript: | 0bp_to_ENSMUST00000000808, NM_008353, uc009mbr.2, uc012gfi.1_5end |
EntrezGene: | Il12rb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 6.62e-13 | 11 |
pro-T cell | 6.62e-13 | 11 |
lymphoid lineage restricted progenitor cell | 1.24e-11 | 12 |
mature alpha-beta T cell | 1.22e-10 | 9 |
alpha-beta T cell | 1.22e-10 | 9 |
immature T cell | 1.22e-10 | 9 |
mature T cell | 1.22e-10 | 9 |
immature alpha-beta T cell | 1.22e-10 | 9 |
lymphocyte | 1.48e-10 | 13 |
common lymphoid progenitor | 1.48e-10 | 13 |
CD4-positive, alpha-beta T cell | 3.11e-09 | 8 |
hematopoietic cell | 8.43e-09 | 32 |
hematopoietic oligopotent progenitor cell | 8.43e-09 | 32 |
hematopoietic stem cell | 8.43e-09 | 32 |
hematopoietic multipotent progenitor cell | 8.43e-09 | 32 |
hematopoietic lineage restricted progenitor cell | 5.52e-08 | 25 |
leukocyte | 1.54e-07 | 17 |
nongranular leukocyte | 1.54e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
gland of gut | 5.05e-25 | 24 |
thymus | 5.77e-24 | 23 |
neck | 5.77e-24 | 23 |
respiratory system epithelium | 5.77e-24 | 23 |
hemolymphoid system gland | 5.77e-24 | 23 |
pharyngeal epithelium | 5.77e-24 | 23 |
thymic region | 5.77e-24 | 23 |
pharyngeal gland | 5.77e-24 | 23 |
entire pharyngeal arch endoderm | 5.77e-24 | 23 |
thymus primordium | 5.77e-24 | 23 |
early pharyngeal endoderm | 5.77e-24 | 23 |
pharynx | 1.01e-22 | 24 |
upper respiratory tract | 1.01e-22 | 24 |
chordate pharynx | 1.01e-22 | 24 |
pharyngeal arch system | 1.01e-22 | 24 |
pharyngeal region of foregut | 1.01e-22 | 24 |
hemopoietic organ | 1.39e-19 | 29 |
immune organ | 1.39e-19 | 29 |
segment of respiratory tract | 1.52e-19 | 27 |
mixed endoderm/mesoderm-derived structure | 6.40e-17 | 35 |
hemolymphoid system | 2.98e-16 | 48 |
immune system | 2.98e-16 | 48 |
hematopoietic system | 4.23e-16 | 45 |
blood island | 4.23e-16 | 45 |
craniocervical region | 1.16e-14 | 36 |
respiratory system | 2.19e-14 | 42 |
respiratory tract | 1.56e-13 | 41 |
anterior region of body | 2.47e-11 | 43 |
gut epithelium | 7.50e-07 | 55 |