FFCP PHASE1:Mm9::chr9:44096214..44096236,-: Difference between revisions
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{{FFCP|EntrezGene=192663|HGNC=|MCL_coexpression_id=704|UniProt=E0CY02|association_with_transcript=0bp_to_ENSMUST00000160384_5end|description=CAGE_peak_3_at_Abcg4_5end|id=chr9:44096214..44096236,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.73e-17!71;UBERON:0003075!1.73e-17!71;UBERON:0007284!1.73e-17!71;UBERON:0004121!1.76e-16!102;UBERON:0000924!1.76e-16!102;UBERON:0006601!1.76e-16!102;UBERON:0001017!3.43e-14!73;UBERON:0005743!3.43e-14!73;UBERON:0001049!1.05e-13!52;UBERON:0005068!1.05e-13!52;UBERON:0006241!1.05e-13!52;UBERON:0007135!1.05e-13!52;UBERON:0000073!1.43e-13!75;UBERON:0001016!1.43e-13!75;UBERON:0000033!2.02e-13!63;UBERON:0000955!3.01e-13!50;UBERON:0006238!3.01e-13!50;UBERON:0002616!8.23e-13!49;UBERON:0003056!8.06e-10!49;UBERON:0003080!5.79e-09!40;UBERON:0002780!2.10e-08!39;UBERON:0001890!2.10e-08!39;UBERON:0006240!2.10e-08!39;UBERON:0002020!7.08e-08!34|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.15e-13,54;UBERON:0001049,3.66e-12,52;UBERON:0005068,3.66e-12,52;UBERON:0006241,3.66e-12,52;UBERON:0007135,3.66e-12,52;UBERON:0001017,1.95e-11,73;UBERON:0001016,8.95e-11,75;UBERON:0002346,1.16e-10,64;UBERON:0003075,1.16e-10,64;UBERON:0007284,1.16e-10,64;UBERON:0000955,1.19e-09,47;UBERON:0006238,1.19e-09,47;UBERON:0002616,3.85e-09,46;UBERON:0010371,4.09e-09,73;UBERON:0004121,4.65e-09,95;UBERON:0000924,4.65e-09,95;UBERON:0006601,4.65e-09,95;UBERON:0010314,5.77e-08,92;UBERON:0003076,6.84e-08,12;UBERON:0003057,6.84e-08,12|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,8.66085380720723,12.3509913107794,17.4890469532037,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0.61506478758457,0,0,0,0,0,0,0,1.17646297606203,0,0,0.125896817975577,0.101376931219515,0,2.34717403304412,0.218025156380447,1.31811709640683,1.1665793944457,0.419959264876088,0,0,0,0,0,0,0,2.02316460859598,2.11596391708813,0.633831403506179,0,0,0,0,0,1.19840044207362,3.45796474789399,0.414758449233911,0.405017814995072,0.630974884054146,1.99955689082663,1.98781686856452,0.367472397644862,0.191690942036473,0,6.60695285996332,4.46905683298157,3.22573719838111,0.791317726381163,1.00636407962651,1.04182674111352,5.30447698102624,4.50210088025344,3.36156145108982,1.76777151284201,1.85083185038834,1.3047961207771,0,0.529000920747499,0,0,0,0,0,0,1.12355536105401,0,0,0,0.845060518660083,0,0,0,0,0,0,0.5709193985953,0,5.49235914539852,0.867426633830679,1.82679286987285,2.53677046981664,2.71300752994721,2.4693628498498,4.02133092254962,0.247194967734374,0,3.5384422077995,0.970601099684455,7.06692859073259,5.81850303762267,0,4.9772735491963,5.02672096352292,0,0,0,0,9.28701964309901,3.66000482254901,1.50785222535437,3.82413504423008,3.3243009452943,8.72709787150152,6.65189178577806,0.611036183101898,4.22983700074316,0,1.05220927943237,0.650602214813519,0.229902104433473,0.360124259610698,0.60281927134286,0.544291993210623,1.40925092313335,1.49922759295566,4.65666067330228,0.646703978798527,0.378212160335639,2.11141348996739,0.876782929710299,0.556094498451196,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.828503090142008,1.17263029990548,0,0,0.393528463494808,0.308534225774757,0,0.804820204198858,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,3.57492912559016,0.823236899034275,0,0,0.426576501070468,0.696710015581316,0.257734922644187,0.403367049246685,0,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0.779856348476481,0,0,0,0.379335801906163,0.228497025219458,1.1270773567308,0.610953983535943,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0,0,6.34011401721157,4.71741588271687,6.74586337154561,11.3601667977562,9.16473207059184,5.34714288740982,7.48009957372108,2.10775794807546,3.0201755450689,0,0.744281895337007,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0.469380496577004,0.335012514883631,0,0.390267295715598,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,8.50918126935297,6.91548950893999,0,0,0.315508219416257,0.390438744296638,0.861693590931196,0,0.222798674082394,0,0,0.876767573733936,0.790575555893047,2.24924921495265,0.709700426041343,1.6025904330053,1.79175655288934,0.659880491890142,0,0.485561272309963,0,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,0,2.04263763452273,0.540183282093931,0.905510786479282,0.857348140126369,1.24138163549592,1.07021290561242,1.97458824722545,0.304464949114599,0,0,0,1.15420377059036,0.161464426695906,0.301564624640779,0.835606408021955,1.64140899745061,0.291480836629851,8.90041449650446,9.56876932467975,1.44470807574256,2.77791791054568,15.4462134743847,18.7271091977804,16.0144721244566,0,0,0,0,1.10717597753397,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0.539457385539283,0.247960367176008,0,0.129614973291793,0,0,0,0.827292452285488,2.33341426012857,1.42075805825504,1.35164900392623,0.704143431874524,0.5208175393758,0.104859344425711,0,0.576060012515731,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.680191150845634,0,0.0897138566094757,0.167884616364078,0.19318959403219,0,0.36630324853453,0.214368379079066,0,1.6942555278512,0.920650473014354,2.29158205375759,1.20297227640581,0.685082519770642,0.755393897389701,2.02506750069542,3.60256962579376,1.81256963593682,1.03552062350364,0.415149390336707,1.59609949360412,1.36586884603307,3.40349403895612,1.67690530102386,1.2869045591501,1.55572709461131,0.824140228955577,0.962757628775446,0.252697211763798,1.01391719956096,1.69763707247469,1.21733959710847,1.08842759088278,0.918967503289812,0.476293691283074,0.463537303779422,0.964546102318525,1.23625770240992,1.17759136107518,0.342869252385415,1.06485483695602,1.43061713968393,0.872078499793971,0.658765662907314,1.01537529470012,1.46342378298218,0.263069711437843,0.950628796921032,1.68342681497322,0.474540072496697,0.788035859004508,1.22769312950907,0.929621047115796,0.771626443924566,0.999242311751784,0.935726433781634,0.214871054048298,0.191288332068843,1.76473135295612,1.62307484934295|short_description=p3@Abcg4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=192663 | |||
|HGNC= | |||
|MCL_coexpression_id=704 | |||
|TSSclassifier=NA | |||
|UniProt=E0CY02 | |||
|association_with_transcript=0bp_to_ENSMUST00000160384_5end | |||
|cluster_id=chr9:44096214..44096236,- | |||
|description=CAGE_peak_3_at_Abcg4_5end | |||
|id=chr9:44096214..44096236,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.73e-17!71;UBERON:0003075!1.73e-17!71;UBERON:0007284!1.73e-17!71;UBERON:0004121!1.76e-16!102;UBERON:0000924!1.76e-16!102;UBERON:0006601!1.76e-16!102;UBERON:0001017!3.43e-14!73;UBERON:0005743!3.43e-14!73;UBERON:0001049!1.05e-13!52;UBERON:0005068!1.05e-13!52;UBERON:0006241!1.05e-13!52;UBERON:0007135!1.05e-13!52;UBERON:0000073!1.43e-13!75;UBERON:0001016!1.43e-13!75;UBERON:0000033!2.02e-13!63;UBERON:0000955!3.01e-13!50;UBERON:0006238!3.01e-13!50;UBERON:0002616!8.23e-13!49;UBERON:0003056!8.06e-10!49;UBERON:0003080!5.79e-09!40;UBERON:0002780!2.10e-08!39;UBERON:0001890!2.10e-08!39;UBERON:0006240!2.10e-08!39;UBERON:0002020!7.08e-08!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.15e-13,54;UBERON:0001049,3.66e-12,52;UBERON:0005068,3.66e-12,52;UBERON:0006241,3.66e-12,52;UBERON:0007135,3.66e-12,52;UBERON:0001017,1.95e-11,73;UBERON:0001016,8.95e-11,75;UBERON:0002346,1.16e-10,64;UBERON:0003075,1.16e-10,64;UBERON:0007284,1.16e-10,64;UBERON:0000955,1.19e-09,47;UBERON:0006238,1.19e-09,47;UBERON:0002616,3.85e-09,46;UBERON:0010371,4.09e-09,73;UBERON:0004121,4.65e-09,95;UBERON:0000924,4.65e-09,95;UBERON:0006601,4.65e-09,95;UBERON:0010314,5.77e-08,92;UBERON:0003076,6.84e-08,12;UBERON:0003057,6.84e-08,12 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,8.66085380720723,12.3509913107794,17.4890469532037,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0.61506478758457,0,0,0,0,0,0,0,1.17646297606203,0,0,0.125896817975577,0.101376931219515,0,2.34717403304412,0.218025156380447,1.31811709640683,1.1665793944457,0.419959264876088,0,0,0,0,0,0,0,2.02316460859598,2.11596391708813,0.633831403506179,0,0,0,0,0,1.19840044207362,3.45796474789399,0.414758449233911,0.405017814995072,0.630974884054146,1.99955689082663,1.98781686856452,0.367472397644862,0.191690942036473,0,6.60695285996332,4.46905683298157,3.22573719838111,0.791317726381163,1.00636407962651,1.04182674111352,5.30447698102624,4.50210088025344,3.36156145108982,1.76777151284201,1.85083185038834,1.3047961207771,0,0.529000920747499,0,0,0,0,0,0,1.12355536105401,0,0,0,0.845060518660083,0,0,0,0,0,0,0.5709193985953,0,5.49235914539852,0.867426633830679,1.82679286987285,2.53677046981664,2.71300752994721,2.4693628498498,4.02133092254962,0.247194967734374,0,3.5384422077995,0.970601099684455,7.06692859073259,5.81850303762267,0,4.9772735491963,5.02672096352292,0,0,0,0,9.28701964309901,3.66000482254901,1.50785222535437,3.82413504423008,3.3243009452943,8.72709787150152,6.65189178577806,0.611036183101898,4.22983700074316,0,1.05220927943237,0.650602214813519,0.229902104433473,0.360124259610698,0.60281927134286,0.544291993210623,1.40925092313335,1.49922759295566,4.65666067330228,0.646703978798527,0.378212160335639,2.11141348996739,0.876782929710299,0.556094498451196,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.828503090142008,1.17263029990548,0,0,0.393528463494808,0.308534225774757,0,0.804820204198858,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,3.57492912559016,0.823236899034275,0,0,0.426576501070468,0.696710015581316,0.257734922644187,0.403367049246685,0,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0.779856348476481,0,0,0,0.379335801906163,0.228497025219458,1.1270773567308,0.610953983535943,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0,0,6.34011401721157,4.71741588271687,6.74586337154561,11.3601667977562,9.16473207059184,5.34714288740982,7.48009957372108,2.10775794807546,3.0201755450689,0,0.744281895337007,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0.469380496577004,0.335012514883631,0,0.390267295715598,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,8.50918126935297,6.91548950893999,0,0,0.315508219416257,0.390438744296638,0.861693590931196,0,0.222798674082394,0,0,0.876767573733936,0.790575555893047,2.24924921495265,0.709700426041343,1.6025904330053,1.79175655288934,0.659880491890142,0,0.485561272309963,0,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,0,2.04263763452273,0.540183282093931,0.905510786479282,0.857348140126369,1.24138163549592,1.07021290561242,1.97458824722545,0.304464949114599,0,0,0,1.15420377059036,0.161464426695906,0.301564624640779,0.835606408021955,1.64140899745061,0.291480836629851,8.90041449650446,9.56876932467975,1.44470807574256,2.77791791054568,15.4462134743847,18.7271091977804,16.0144721244566,0,0,0,0,1.10717597753397,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0.539457385539283,0.247960367176008,0,0.129614973291793,0,0,0,0.827292452285488,2.33341426012857,1.42075805825504,1.35164900392623,0.704143431874524,0.5208175393758,0.104859344425711,0,0.576060012515731,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.680191150845634,0,0.0897138566094757,0.167884616364078,0.19318959403219,0,0.36630324853453,0.214368379079066,0,1.6942555278512,0.920650473014354,2.29158205375759,1.20297227640581,0.685082519770642,0.755393897389701,2.02506750069542,3.60256962579376,1.81256963593682,1.03552062350364,0.415149390336707,1.59609949360412,1.36586884603307,3.40349403895612,1.67690530102386,1.2869045591501,1.55572709461131,0.824140228955577,0.962757628775446,0.252697211763798,1.01391719956096,1.69763707247469,1.21733959710847,1.08842759088278,0.918967503289812,0.476293691283074,0.463537303779422,0.964546102318525,1.23625770240992,1.17759136107518,0.342869252385415,1.06485483695602,1.43061713968393,0.872078499793971,0.658765662907314,1.01537529470012,1.46342378298218,0.263069711437843,0.950628796921032,1.68342681497322,0.474540072496697,0.788035859004508,1.22769312950907,0.929621047115796,0.771626443924566,0.999242311751784,0.935726433781634,0.214871054048298,0.191288332068843,1.76473135295612,1.62307484934295 | |||
|short_description=p3@Abcg4 | |||
}} |
Latest revision as of 16:43, 26 September 2015
Short description: | p3@Abcg4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Abcg4_5end |
Coexpression cluster: | MCL_coexpression_mm9:704 |
Association with transcript: | 0bp_to_ENSMUST00000160384_5end |
EntrezGene: | Abcg4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.15e-13 | 54 |
neural tube | 3.66e-12 | 52 |
neural rod | 3.66e-12 | 52 |
future spinal cord | 3.66e-12 | 52 |
neural keel | 3.66e-12 | 52 |
central nervous system | 1.95e-11 | 73 |
nervous system | 8.95e-11 | 75 |
neurectoderm | 1.16e-10 | 64 |
neural plate | 1.16e-10 | 64 |
presumptive neural plate | 1.16e-10 | 64 |
brain | 1.19e-09 | 47 |
future brain | 1.19e-09 | 47 |
regional part of brain | 3.85e-09 | 46 |
ecto-epithelium | 4.09e-09 | 73 |
ectoderm-derived structure | 4.65e-09 | 95 |
ectoderm | 4.65e-09 | 95 |
presumptive ectoderm | 4.65e-09 | 95 |
structure with developmental contribution from neural crest | 5.77e-08 | 92 |
posterior neural tube | 6.84e-08 | 12 |
chordal neural plate | 6.84e-08 | 12 |