FFCP PHASE1:Mm9::chr9:52487953..52487964,+: Difference between revisions
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{{FFCP|EntrezGene=382139|HGNC=|MCL_coexpression_id=20|UniProt=|association_with_transcript=-3bp_to_NR_045333_5end|description=CAGE_peak_1_at_Gm1715_5end|id=chr9:52487953..52487964,+|ontology_enrichment_celltype=CL:0000117!8.69e-10!23;CL:0000337!8.69e-10!23;CL:0000540!4.36e-07!33;CL:0000047!4.36e-07!33;CL:0000031!4.36e-07!33;CL:0000404!4.36e-07!33;CL:0002610!6.27e-07!3;CL:0002612!9.73e-07!3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.36e-16!52;UBERON:0005068!3.36e-16!52;UBERON:0006241!3.36e-16!52;UBERON:0007135!3.36e-16!52;UBERON:0001017!9.30e-16!73;UBERON:0005743!9.30e-16!73;UBERON:0000073!3.95e-15!75;UBERON:0001016!3.95e-15!75;UBERON:0002346!1.01e-14!71;UBERON:0003075!1.01e-14!71;UBERON:0007284!1.01e-14!71;UBERON:0000033!3.82e-13!63;UBERON:0004121!7.15e-13!102;UBERON:0000924!7.15e-13!102;UBERON:0006601!7.15e-13!102;UBERON:0002616!9.58e-13!49;UBERON:0000955!2.24e-12!50;UBERON:0006238!2.24e-12!50;UBERON:0003076!4.39e-12!12;UBERON:0003057!4.39e-12!12;UBERON:0002240!5.82e-12!6;UBERON:0005174!5.82e-12!6;UBERON:0001137!5.82e-12!6;UBERON:0001948!5.35e-10!5;UBERON:0002315!5.35e-10!5;UBERON:0002020!1.33e-09!34;UBERON:0003056!1.45e-09!49;UBERON:0002298!1.31e-08!6;UBERON:0007811!6.58e-08!86;UBERON:0003080!1.23e-07!40;UBERON:0004684!6.27e-07!3;UBERON:0002275!6.27e-07!3;UBERON:0002257!9.73e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0002240,9.15e-13,6;UBERON:0005174,9.15e-13,6;UBERON:0001137,9.15e-13,6;UBERON:0001049,7.11e-12,52;UBERON:0005068,7.11e-12,52;UBERON:0006241,7.11e-12,52;UBERON:0007135,7.11e-12,52;UBERON:0000073,2.13e-11,54;UBERON:0003076,3.83e-11,12;UBERON:0003057,3.83e-11,12;UBERON:0001017,2.45e-10,73;UBERON:0001016,4.85e-10,75;UBERON:0002346,1.60e-09,64;UBERON:0003075,1.60e-09,64;UBERON:0007284,1.60e-09,64;UBERON:0002259,4.39e-09,1;UBERON:0002314,4.39e-09,1;UBERON:0004061,4.39e-09,1;UBERON:0006777,4.39e-09,1;UBERON:0005882,4.39e-09,1;UBERON:0001851,5.27e-09,1;UBERON:0005889,5.27e-09,1;UBERON:0010371,2.92e-08,73;UBERON:0004121,9.33e-08,95;UBERON:0000924,9.33e-08,95;UBERON:0006601,9.33e-08,95;UBERON:0001948,2.80e-07,5;UBERON:0002315,2.80e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0.441737081903227,0,0,0,2.20231761998777,0.766124028511126,0.768032666281217,0.263772575460388,0,0,0.837548997004143,0,0.916789486660861,2.06240009831567,0.569486723196412,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,1.3481157546434,0.457500602818626,0,1.39059456153821,1.27857728665165,1.45451631191692,0.486723789203273,0,0,0,0.210441855886474,0,0,0,0,0.204109497453984,0.384341160854549,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,0.586058432961016,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37016503954128,0,0,0.900642406448441,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0|short_description=p1@Gm1715}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=382139 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_NR_045333_5end | |||
|cluster_id=chr9:52487953..52487964,+ | |||
|description=CAGE_peak_1_at_Gm1715_5end | |||
|id=chr9:52487953..52487964,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.69e-10!23;CL:0000337!8.69e-10!23;CL:0000540!4.36e-07!33;CL:0000047!4.36e-07!33;CL:0000031!4.36e-07!33;CL:0000404!4.36e-07!33;CL:0002610!6.27e-07!3;CL:0002612!9.73e-07!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.36e-16!52;UBERON:0005068!3.36e-16!52;UBERON:0006241!3.36e-16!52;UBERON:0007135!3.36e-16!52;UBERON:0001017!9.30e-16!73;UBERON:0005743!9.30e-16!73;UBERON:0000073!3.95e-15!75;UBERON:0001016!3.95e-15!75;UBERON:0002346!1.01e-14!71;UBERON:0003075!1.01e-14!71;UBERON:0007284!1.01e-14!71;UBERON:0000033!3.82e-13!63;UBERON:0004121!7.15e-13!102;UBERON:0000924!7.15e-13!102;UBERON:0006601!7.15e-13!102;UBERON:0002616!9.58e-13!49;UBERON:0000955!2.24e-12!50;UBERON:0006238!2.24e-12!50;UBERON:0003076!4.39e-12!12;UBERON:0003057!4.39e-12!12;UBERON:0002240!5.82e-12!6;UBERON:0005174!5.82e-12!6;UBERON:0001137!5.82e-12!6;UBERON:0001948!5.35e-10!5;UBERON:0002315!5.35e-10!5;UBERON:0002020!1.33e-09!34;UBERON:0003056!1.45e-09!49;UBERON:0002298!1.31e-08!6;UBERON:0007811!6.58e-08!86;UBERON:0003080!1.23e-07!40;UBERON:0004684!6.27e-07!3;UBERON:0002275!6.27e-07!3;UBERON:0002257!9.73e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,9.15e-13,6;UBERON:0005174,9.15e-13,6;UBERON:0001137,9.15e-13,6;UBERON:0001049,7.11e-12,52;UBERON:0005068,7.11e-12,52;UBERON:0006241,7.11e-12,52;UBERON:0007135,7.11e-12,52;UBERON:0000073,2.13e-11,54;UBERON:0003076,3.83e-11,12;UBERON:0003057,3.83e-11,12;UBERON:0001017,2.45e-10,73;UBERON:0001016,4.85e-10,75;UBERON:0002346,1.60e-09,64;UBERON:0003075,1.60e-09,64;UBERON:0007284,1.60e-09,64;UBERON:0002259,4.39e-09,1;UBERON:0002314,4.39e-09,1;UBERON:0004061,4.39e-09,1;UBERON:0006777,4.39e-09,1;UBERON:0005882,4.39e-09,1;UBERON:0001851,5.27e-09,1;UBERON:0005889,5.27e-09,1;UBERON:0010371,2.92e-08,73;UBERON:0004121,9.33e-08,95;UBERON:0000924,9.33e-08,95;UBERON:0006601,9.33e-08,95;UBERON:0001948,2.80e-07,5;UBERON:0002315,2.80e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0.441737081903227,0,0,0,2.20231761998777,0.766124028511126,0.768032666281217,0.263772575460388,0,0,0.837548997004143,0,0.916789486660861,2.06240009831567,0.569486723196412,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,1.3481157546434,0.457500602818626,0,1.39059456153821,1.27857728665165,1.45451631191692,0.486723789203273,0,0,0,0.210441855886474,0,0,0,0,0.204109497453984,0.384341160854549,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,0.586058432961016,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37016503954128,0,0,0.900642406448441,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p1@Gm1715 | |||
}} |
Latest revision as of 20:05, 26 September 2015
Short description: | p1@Gm1715 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm1715_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -3bp_to_NR_045333_5end |
EntrezGene: | Gm1715 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spinal cord | 9.15e-13 | 6 |
dorsal region element | 9.15e-13 | 6 |
dorsum | 9.15e-13 | 6 |
neural tube | 7.11e-12 | 52 |
neural rod | 7.11e-12 | 52 |
future spinal cord | 7.11e-12 | 52 |
neural keel | 7.11e-12 | 52 |
regional part of nervous system | 2.13e-11 | 54 |
posterior neural tube | 3.83e-11 | 12 |
chordal neural plate | 3.83e-11 | 12 |
central nervous system | 2.45e-10 | 73 |
nervous system | 4.85e-10 | 75 |
neurectoderm | 1.60e-09 | 64 |
neural plate | 1.60e-09 | 64 |
presumptive neural plate | 1.60e-09 | 64 |
corpora quadrigemina | 4.39e-09 | 1 |
midbrain tectum | 4.39e-09 | 1 |
neural tube mantle layer | 4.39e-09 | 1 |
tectal plate | 4.39e-09 | 1 |
neural tube alar plate | 4.39e-09 | 1 |
cortex | 5.27e-09 | 1 |
zygote cortex | 5.27e-09 | 1 |
ecto-epithelium | 2.92e-08 | 73 |
ectoderm-derived structure | 9.33e-08 | 95 |
ectoderm | 9.33e-08 | 95 |
presumptive ectoderm | 9.33e-08 | 95 |
regional part of spinal cord | 2.80e-07 | 5 |
gray matter of spinal cord | 2.80e-07 | 5 |