FFCP PHASE1:Mm9::chrX:50144337..50144350,+: Difference between revisions
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{{FFCP|EntrezGene=434778|HGNC=|MCL_coexpression_id=3756|UniProt=Q3UYG1|association_with_transcript=-26bp_to_ENSMUST00000101588,NM_001034059,uc009tem.1_5end|description=CAGE_peak_3_at_Ccdc160_5end|id=chrX:50144337..50144350,+|ontology_enrichment_celltype=CL:0000117!6.33e-07!23;CL:0000337!6.33e-07!23|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.56e-21!71;UBERON:0003075!1.56e-21!71;UBERON:0007284!1.56e-21!71;UBERON:0001049!7.18e-17!52;UBERON:0005068!7.18e-17!52;UBERON:0006241!7.18e-17!52;UBERON:0007135!7.18e-17!52;UBERON:0000033!5.04e-16!63;UBERON:0004121!2.11e-15!102;UBERON:0000924!2.11e-15!102;UBERON:0006601!2.11e-15!102;UBERON:0000955!2.22e-14!50;UBERON:0006238!2.22e-14!50;UBERON:0002616!5.35e-14!49;UBERON:0003056!1.05e-12!49;UBERON:0001017!5.19e-12!73;UBERON:0005743!5.19e-12!73;UBERON:0003080!7.06e-12!40;UBERON:0002020!1.64e-11!34;UBERON:0002780!3.12e-11!39;UBERON:0001890!3.12e-11!39;UBERON:0006240!3.12e-11!39;UBERON:0000073!4.07e-11!75;UBERON:0001016!4.07e-11!75;UBERON:0002791!6.86e-09!29;UBERON:0003528!6.86e-09!29;UBERON:0001893!6.86e-09!29;UBERON:0004176!3.24e-07!17;UBERON:0009196!3.24e-07!17;UBERON:0009117!3.24e-07!17;UBERON:0007811!6.11e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002369,8.00e-15,7;UBERON:0006858,8.00e-15,7;UBERON:0000073,7.75e-11,54;UBERON:0001049,3.69e-10,52;UBERON:0005068,3.69e-10,52;UBERON:0006241,3.69e-10,52;UBERON:0007135,3.69e-10,52;UBERON:0010314,2.04e-09,92;UBERON:0001017,1.68e-08,73;UBERON:0002950,2.27e-08,4;UBERON:0001891,2.27e-08,4;UBERON:0009616,2.27e-08,4;UBERON:0010286,2.27e-08,4;UBERON:0001016,3.93e-08,75;UBERON:0002020,7.25e-08,34;UBERON:0002346,2.26e-07,64;UBERON:0003075,2.26e-07,64;UBERON:0007284,2.26e-07,64;UBERON:0002616,4.54e-07,46;UBERON:0004121,7.05e-07,95;UBERON:0000924,7.05e-07,95;UBERON:0006601,7.05e-07,95;UBERON:0000955,7.64e-07,47;UBERON:0006238,7.64e-07,47;UBERON:0003064,8.89e-07,14|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,1.21389876515759,0,0,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0.270011876663381,0.210324961351382,1.99955689082663,0.883474163806454,0.367472397644862,0.191690942036473,0.919218786610021,0,1.27687338085188,1.53606533256243,1.18697658957174,0.640413505216868,0.52091337055676,1.3959149950069,2.8138130501584,1.06958773443767,2.06240009831567,0.711858403995515,1.1183966749518,0,0,1.44932244350839,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0.11418387971906,0,2.52351636410202,1.21439728736295,2.74018930480927,1.61430848079241,3.16517545160507,4.8211369925639,3.64433114856059,1.48316980640624,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,2.24685959107234,0.915001205637253,0.502617408451458,1.21677024134594,0.767146371990992,1.66230435647648,1.1356888414743,0.203678727700633,0.124406970610093,0,0.631325567659422,0.520481771850815,0,0.360124259610698,0.30140963567143,0.204109497453984,0.384341160854549,0.562210347358373,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,1.05144974282064,1.02904612379284,0,0,0.426576501070468,0.464473343720877,0.128867461322093,1.00841762311671,0.889512175379481,0.951128130562796,0,0.329397909448022,0.251335208800269,0.596869416123452,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.456994050438915,0,0.610953983535943,0.581857461502877,0.911765658574141,1.07502113111237,1.18088118383682,1.09899109488962,1.23397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0.509235257325564,0,0.335012514883631,0.238043640886014,0.195133647857799,0.157635144106191,0,0.318909537314974,0.163863314715738,0.345369963731791,0.723245292907558,0,0,0,0.275936746304732,1.9266070798535,2.57865710502847,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.642642632843614,1.27746076687442,0.712262414669021,0.488660878060728,0.989820737835213,0,0.485561272309963,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0.540183282093931,0.388076051348264,0.214337035031592,0.354680467284547,0.535106452806212,0.329098041204242,0.304464949114599,0,0.42366414172764,0.882113592219848,0.16488625294148,0,0,0,0,0,1.29797711407357,0,0,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,3.72803587852155,3.38215763210514,0.598066184175915,0.165458490457098,0.972255941720238,0.645799117388655,0.675824501963113,1.87771581833206,0.651021924219751,0.838874755405687,1.93267296660805,3.45636007509439,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0.501572104035363,0.564751842617067,0.460325236507177,0,0.68741272937475,2.74033007908257,0.755393897389701,1.35004500046361,0.900642406448441,1.81256963593682,1.03552062350364,0.103787347584177,0,0,0,0.209613162627982,0.551530525350042,0.44449345560323,0.412070114477788,1.60459604795908,0.505394423527595,0.25347929989024,0.377252682772152,0,0.256100609619477,0.229741875822453,0.476293691283074,0.463537303779422,0.38581844092741,0.412085900803307,0.441596760403192,1.37147700954166,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,1.09756783723664,0.263069711437843,0,0,0.237270036248348,0.394017929502254,0,0.464810523557898,0.192906610981141,0.249810577937946,0.701794825336225,0,0,0.220591419119515,0.231867835620421|short_description=p3@Ccdc160}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=434778 | |||
|HGNC= | |||
|MCL_coexpression_id=3756 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UYG1 | |||
|association_with_transcript=-26bp_to_ENSMUST00000101588,NM_001034059,uc009tem.1_5end | |||
|cluster_id=chrX:50144337..50144350,+ | |||
|description=CAGE_peak_3_at_Ccdc160_5end | |||
|id=chrX:50144337..50144350,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.33e-07!23;CL:0000337!6.33e-07!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.56e-21!71;UBERON:0003075!1.56e-21!71;UBERON:0007284!1.56e-21!71;UBERON:0001049!7.18e-17!52;UBERON:0005068!7.18e-17!52;UBERON:0006241!7.18e-17!52;UBERON:0007135!7.18e-17!52;UBERON:0000033!5.04e-16!63;UBERON:0004121!2.11e-15!102;UBERON:0000924!2.11e-15!102;UBERON:0006601!2.11e-15!102;UBERON:0000955!2.22e-14!50;UBERON:0006238!2.22e-14!50;UBERON:0002616!5.35e-14!49;UBERON:0003056!1.05e-12!49;UBERON:0001017!5.19e-12!73;UBERON:0005743!5.19e-12!73;UBERON:0003080!7.06e-12!40;UBERON:0002020!1.64e-11!34;UBERON:0002780!3.12e-11!39;UBERON:0001890!3.12e-11!39;UBERON:0006240!3.12e-11!39;UBERON:0000073!4.07e-11!75;UBERON:0001016!4.07e-11!75;UBERON:0002791!6.86e-09!29;UBERON:0003528!6.86e-09!29;UBERON:0001893!6.86e-09!29;UBERON:0004176!3.24e-07!17;UBERON:0009196!3.24e-07!17;UBERON:0009117!3.24e-07!17;UBERON:0007811!6.11e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,8.00e-15,7;UBERON:0006858,8.00e-15,7;UBERON:0000073,7.75e-11,54;UBERON:0001049,3.69e-10,52;UBERON:0005068,3.69e-10,52;UBERON:0006241,3.69e-10,52;UBERON:0007135,3.69e-10,52;UBERON:0010314,2.04e-09,92;UBERON:0001017,1.68e-08,73;UBERON:0002950,2.27e-08,4;UBERON:0001891,2.27e-08,4;UBERON:0009616,2.27e-08,4;UBERON:0010286,2.27e-08,4;UBERON:0001016,3.93e-08,75;UBERON:0002020,7.25e-08,34;UBERON:0002346,2.26e-07,64;UBERON:0003075,2.26e-07,64;UBERON:0007284,2.26e-07,64;UBERON:0002616,4.54e-07,46;UBERON:0004121,7.05e-07,95;UBERON:0000924,7.05e-07,95;UBERON:0006601,7.05e-07,95;UBERON:0000955,7.64e-07,47;UBERON:0006238,7.64e-07,47;UBERON:0003064,8.89e-07,14 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,1.21389876515759,0,0,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0.270011876663381,0.210324961351382,1.99955689082663,0.883474163806454,0.367472397644862,0.191690942036473,0.919218786610021,0,1.27687338085188,1.53606533256243,1.18697658957174,0.640413505216868,0.52091337055676,1.3959149950069,2.8138130501584,1.06958773443767,2.06240009831567,0.711858403995515,1.1183966749518,0,0,1.44932244350839,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0.11418387971906,0,2.52351636410202,1.21439728736295,2.74018930480927,1.61430848079241,3.16517545160507,4.8211369925639,3.64433114856059,1.48316980640624,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,2.24685959107234,0.915001205637253,0.502617408451458,1.21677024134594,0.767146371990992,1.66230435647648,1.1356888414743,0.203678727700633,0.124406970610093,0,0.631325567659422,0.520481771850815,0,0.360124259610698,0.30140963567143,0.204109497453984,0.384341160854549,0.562210347358373,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,1.05144974282064,1.02904612379284,0,0,0.426576501070468,0.464473343720877,0.128867461322093,1.00841762311671,0.889512175379481,0.951128130562796,0,0.329397909448022,0.251335208800269,0.596869416123452,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.456994050438915,0,0.610953983535943,0.581857461502877,0.911765658574141,1.07502113111237,1.18088118383682,1.09899109488962,1.23397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0.509235257325564,0,0.335012514883631,0.238043640886014,0.195133647857799,0.157635144106191,0,0.318909537314974,0.163863314715738,0.345369963731791,0.723245292907558,0,0,0,0.275936746304732,1.9266070798535,2.57865710502847,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.642642632843614,1.27746076687442,0.712262414669021,0.488660878060728,0.989820737835213,0,0.485561272309963,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0.540183282093931,0.388076051348264,0.214337035031592,0.354680467284547,0.535106452806212,0.329098041204242,0.304464949114599,0,0.42366414172764,0.882113592219848,0.16488625294148,0,0,0,0,0,1.29797711407357,0,0,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,3.72803587852155,3.38215763210514,0.598066184175915,0.165458490457098,0.972255941720238,0.645799117388655,0.675824501963113,1.87771581833206,0.651021924219751,0.838874755405687,1.93267296660805,3.45636007509439,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0.501572104035363,0.564751842617067,0.460325236507177,0,0.68741272937475,2.74033007908257,0.755393897389701,1.35004500046361,0.900642406448441,1.81256963593682,1.03552062350364,0.103787347584177,0,0,0,0.209613162627982,0.551530525350042,0.44449345560323,0.412070114477788,1.60459604795908,0.505394423527595,0.25347929989024,0.377252682772152,0,0.256100609619477,0.229741875822453,0.476293691283074,0.463537303779422,0.38581844092741,0.412085900803307,0.441596760403192,1.37147700954166,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,1.09756783723664,0.263069711437843,0,0,0.237270036248348,0.394017929502254,0,0.464810523557898,0.192906610981141,0.249810577937946,0.701794825336225,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p3@Ccdc160 | |||
}} |
Latest revision as of 21:34, 1 October 2015
Short description: | p3@Ccdc160 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ccdc160_5end |
Coexpression cluster: | MCL_coexpression_mm9:3756 |
Association with transcript: | -26bp_to_ENSMUST00000101588, NM_001034059, uc009tem.1_5end |
EntrezGene: | Ccdc160 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adrenal gland | 8.00e-15 | 7 |
adrenal/interrenal gland | 8.00e-15 | 7 |
regional part of nervous system | 7.75e-11 | 54 |
neural tube | 3.69e-10 | 52 |
neural rod | 3.69e-10 | 52 |
future spinal cord | 3.69e-10 | 52 |
neural keel | 3.69e-10 | 52 |
structure with developmental contribution from neural crest | 2.04e-09 | 92 |
central nervous system | 1.68e-08 | 73 |
regional part of midbrain | 2.27e-08 | 4 |
midbrain | 2.27e-08 | 4 |
presumptive midbrain | 2.27e-08 | 4 |
midbrain neural tube | 2.27e-08 | 4 |
nervous system | 3.93e-08 | 75 |
gray matter | 7.25e-08 | 34 |
neurectoderm | 2.26e-07 | 64 |
neural plate | 2.26e-07 | 64 |
presumptive neural plate | 2.26e-07 | 64 |
regional part of brain | 4.54e-07 | 46 |
ectoderm-derived structure | 7.05e-07 | 95 |
ectoderm | 7.05e-07 | 95 |
presumptive ectoderm | 7.05e-07 | 95 |
brain | 7.64e-07 | 47 |
future brain | 7.64e-07 | 47 |
intermediate mesoderm | 8.89e-07 | 14 |