FF:14317-155D6: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@ | |DRA_sample_Accession=CAGE@SAMD00005485 | ||
|DRA_sample_Accession_RNASeq=RNA-Seq@SAMD00005485!sRNA-Seq@SAMD00005485 | |||
|accession_numbers=CAGE;DRX008042;DRR008914;DRZ000339;DRZ001724;DRZ011689;DRZ013074 | |||
|accession_numbers_RNASeq=RNA-Seq;DRX057107;DRR062866;DRZ007942!sRNA-Seq;DRX036986;DRR041352;DRZ006994 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0004119,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0000065,UBERON:0001004 | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0004119,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0000065,UBERON:0001004 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000255,CL:0002076,CL:0002368 | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000255,CL:0002076,CL:0002368 | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr3:189507432..189507459,+!p1@TP63!2.42!262.50!TP63;;chr11:34642612..34642646,+!p1@EHF!2.27!186.06!EHF;;chr1:209979467..209979494,-!p1@IRF6!1.99!109.11!IRF6;;chr12:66218255..66218304,+!p3@HMGA2!1.89!197.29!HMGA2;;chr1:6479968..6479986,-!p1@HES2!1.73!52.58!HES2;;chr6:10415276..10415341,-!p2@TFAP2A!1.72!62.66!TFAP2A;;chr15:83953397..83953425,-!p1@BNC1!1.69!55.00!BNC1;;chr8:102504651..102504683,+!p1@GRHL2!1.69!48.11!GRHL2;;chr6:10412600..10412637,-!p1@TFAP2A!1.61!65.59!TFAP2A;;chr1:209979411..209979433,-!p2@IRF6!1.59!37.52!IRF6;;chr12:66218598..66218645,+!p2@HMGA2!1.58!162.32!HMGA2;;chr12:66218183..66218209,+!p4@HMGA2!1.54!63.04!HMGA2;;chr12:66218212..66218244,+!p5@HMGA2!1.51!45.30!HMGA2;;chr17:7493405..7493419,-!p1@SOX15!1.51!31.65!SOX15;;chrY:21906594..21906622,-!p1@KDM5D!1.50!30.37!KDM5D;;chr3:111314186..111314204,-!p1@ZBED2!1.48!28.97!ZBED2;;chr6:15246200..15246214,+!p2@JARID2!1.45!73.63!JARID2;;chr14:74256787..74256858,-!p6@C14orf43!1.43!25.65!C14orf43;;chr19:45971246..45971265,+!p1@FOSB!1.41!438.35!FOSB;;chr12:54785054..54785072,-!p4@ZNF385A!1.41!27.56!ZNF385A;;chr5:2751762..2751784,-!p1@IRX2!1.40!23.86!IRX2;;chr22:19748231..19748317,+!p1@TBX1!1.39!23.74!TBX1;;chr12:66218836..66218888,+!p1@HMGA2!1.38!205.97!HMGA2;;chr2:208030647..208030689,-!p1@KLF7!1.37!180.57!KLF7;;chr12:54785074..54785122,-!p2@ZNF385A!1.34!31.65!ZNF385A;;chr8:10588010..10588030,-!p1@SOX7!1.32!19.78!SOX7;;chr16:67881588..67881612,-!p2@CENPT!1.31!26.54!CENPT;;chr5:2751785..2751808,-!p2@IRX2!1.27!17.74!IRX2;;chr2:46524897..46524911,+!p2@EPAS1!1.25!46.20!EPAS1;;chr3:169381420..169381535,-!p1@MECOM!1.24!19.01!MECOM;;chr19:45908292..45908374,-!p1@PPP1R13L!1.23!140.12!PPP1R13L;;chr2:208394817..208394834,+!p3@CREB1!1.22!62.66!CREB1;;chr6:34524093..34524135,-!p1@SPDEF!1.20!14.93!SPDEF;;chr3:189507460..189507471,+!p3@TP63!1.18!14.04!TP63;;chrX:56258844..56258882,+!p1@KLF8!1.14!17.61!KLF8;;chr14:37131058..37131139,+!p1@PAX9!1.13!12.63!PAX9;;chr3:101568349..101568365,+!p1@NFKBIZ!1.12!628.75!NFKBIZ;;chr6:10415484..10415508,-!p3@TFAP2A!1.11!11.87!TFAP2A;;chr1:37945588..37945604,+!p3@ZC3H12A!1.11!11.74!ZC3H12A;;chr8:49833948..49833973,-!p2@SNAI2!1.08!69.93!SNAI2;;chr12:27485762..27485776,+!p3@ARNTL2!1.08!29.73!ARNTL2;;chr11:120107344..120107351,+!p1@POU2F3!1.08!13.53!POU2F3;;chr6:34524049..34524089,-!p2@SPDEF!1.07!10.72!SPDEF;;chr19:42636586..42636607,-!p1@POU2F2!1.06!29.35!POU2F2;;chr6:34524025..34524045,-!p3@SPDEF!1.06!10.46!SPDEF;;chr6:126240380..126240430,+!p2@NCOA7!1.05!26.67!NCOA7;;chr12:66218003..66218018,+!p9@HMGA2!1.04!12.25!HMGA2;;chr14:75745523..75745537,+!p1@FOS!1.03!1182.71!FOS;;chr13:73633131..73633149,+!p1@KLF5!1.03!105.79!KLF5;;chr2:122042770..122042785,-!p1@TFCP2L1!1.03!9.70!TFCP2L1;;chrY:2803415..2803468,+!p1@ZFY!1.03!9.70!ZFY;;chr6:15246217..15246228,+!p3@JARID2!1.02!16.84!JARID2;;chr12:66218152..66218174,+!p10@HMGA2!1.02!10.08!HMGA2;;chr11:34645791..34645836,+!p3@EHF!1.02!9.57!EHF;;chrX:85403445..85403479,+!p2@DACH2!1.02!9.44!DACH2;;chr12:66218573..66218596,+!p7@HMGA2!1.01!13.78!HMGA2;;chr19:52598958..52599026,-!p1@ZNF841!1.00!87.16!ZNF841;;chr17:7492684..7492778,-!p2@SOX15!1.00!19.27!SOX15;;chr12:66218378..66218401,+!p6@HMGA2!1.00!14.17!HMGA2;;chr8:102504690..102504704,+!p3@GRHL2!1.00!9.06!GRHL2;;chr18:42260840..42260860,+!p2@SETBP1!1.00!8.93!SETBP1;;chr8:49833978..49833996,-!p1@SNAI2!0.99!184.40!SNAI2;;chr11:47236584..47236679,+!p1@DDB2!0.99!96.99!DDB2;;chr6:10413188..10413249,-!p7@TFAP2A!0.98!8.55!TFAP2A;;chr4:87857474..87857489,+!p7@AFF1!0.97!14.93!AFF1;;chr6:10412576..10412599,-!p5@TFAP2A!0.97!8.42!TFAP2A;;chr15:67418047..67418093,+!p4@SMAD3!0.96!10.34!SMAD3;;chr2:60778035..60778060,-!p4@BCL11A!0.96!9.83!BCL11A;;chr1:201979703..201979721,+!p2@ELF3!0.96!8.04!ELF3;;chr3:141087339..141087387,+!p2@ZBTB38!0.95!84.22!ZBTB38;;chr14:62162285..62162296,+!p3@HIF1A!0.95!42.62!HIF1A;;chr11:34642656..34642667,+!p2@EHF!0.95!7.91!EHF;;chr1:61547811..61547837,+!p7@NFIA!0.94!11.36!NFIA;;chr7:28725740..28725778,+!p1@CREB5!0.93!69.80!CREB5;;chr1:24646263..24646277,+!p4@GRHL3!0.93!7.53!GRHL3;;chr11:16629261..16629284,-!p1@SOX6!0.93!7.53!SOX6;;chr18:42260920..42260951,+!p4@SETBP1!0.92!7.40!SETBP1;;chr8:102504979..102505010,+!p2@GRHL2!0.92!7.27!GRHL2;;chr1:158979792..158979814,+!p2@IFI16!0.91!71.72!IFI16;;chr3:111314230..111314241,-!p2@ZBED2!0.90!6.89!ZBED2;;chr17:80797886..80797906,-!p1@ZNF750!0.90!6.89!ZNF750;;chr1:37940170..37940190,+!p1@ZC3H12A!0.89!88.31!ZC3H12A;;chr2:70142232..70142251,+!p1@MXD1!0.89!40.33!MXD1;;chr11:6947720..6947812,+!p1@ZNF215!0.89!9.06!ZNF215;;chr21:36260343..36260402,-!p6@RUNX1!0.88!10.97!RUNX1;;chr20:3388238..3388323,-!p1@C20orf194!0.87!47.34!C20orf194;;chr6:126240442..126240459,+!p4@NCOA7!0.87!8.29!NCOA7;;chr18:42260861..42260882,+!p5@SETBP1!0.87!6.38!SETBP1;;chr12:66218420..66218439,+!p12@HMGA2!0.87!6.38!HMGA2;;chr12:66218904..66218913,+!p11@HMGA2!0.87!6.38!HMGA2;;chr2:238600933..238600985,+!p3@LRRFIP1!0.86!35.48!LRRFIP1;;chr20:45142154..45142227,-!p1@ZNF334!0.86!12.76!ZNF334;;chr14:380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| |expression_enrichment_score=chr3:189507432..189507459,+!p1@TP63!2.42!262.50!TP63;;chr11:34642612..34642646,+!p1@EHF!2.27!186.06!EHF;;chr1:209979467..209979494,-!p1@IRF6!1.99!109.11!IRF6;;chr12:66218255..66218304,+!p3@HMGA2!1.89!197.29!HMGA2;;chr1:6479968..6479986,-!p1@HES2!1.73!52.58!HES2;;chr6:10415276..10415341,-!p2@TFAP2A!1.72!62.66!TFAP2A;;chr15:83953397..83953425,-!p1@BNC1!1.69!55.00!BNC1;;chr8:102504651..102504683,+!p1@GRHL2!1.69!48.11!GRHL2;;chr6:10412600..10412637,-!p1@TFAP2A!1.61!65.59!TFAP2A;;chr1:209979411..209979433,-!p2@IRF6!1.59!37.52!IRF6;;chr12:66218598..66218645,+!p2@HMGA2!1.58!162.32!HMGA2;;chr12:66218183..66218209,+!p4@HMGA2!1.54!63.04!HMGA2;;chr12:66218212..66218244,+!p5@HMGA2!1.51!45.30!HMGA2;;chr17:7493405..7493419,-!p1@SOX15!1.51!31.65!SOX15;;chrY:21906594..21906622,-!p1@KDM5D!1.50!30.37!KDM5D;;chr3:111314186..111314204,-!p1@ZBED2!1.48!28.97!ZBED2;;chr6:15246200..15246214,+!p2@JARID2!1.45!73.63!JARID2;;chr14:74256787..74256858,-!p6@C14orf43!1.43!25.65!C14orf43;;chr19:45971246..45971265,+!p1@FOSB!1.41!438.35!FOSB;;chr12:54785054..54785072,-!p4@ZNF385A!1.41!27.56!ZNF385A;;chr5:2751762..2751784,-!p1@IRX2!1.40!23.86!IRX2;;chr22:19748231..19748317,+!p1@TBX1!1.39!23.74!TBX1;;chr12:66218836..66218888,+!p1@HMGA2!1.38!205.97!HMGA2;;chr2:208030647..208030689,-!p1@KLF7!1.37!180.57!KLF7;;chr12:54785074..54785122,-!p2@ZNF385A!1.34!31.65!ZNF385A;;chr8:10588010..10588030,-!p1@SOX7!1.32!19.78!SOX7;;chr16:67881588..67881612,-!p2@CENPT!1.31!26.54!CENPT;;chr5:2751785..2751808,-!p2@IRX2!1.27!17.74!IRX2;;chr2:46524897..46524911,+!p2@EPAS1!1.25!46.20!EPAS1;;chr3:169381420..169381535,-!p1@MECOM!1.24!19.01!MECOM;;chr19:45908292..45908374,-!p1@PPP1R13L!1.23!140.12!PPP1R13L;;chr2:208394817..208394834,+!p3@CREB1!1.22!62.66!CREB1;;chr6:34524093..34524135,-!p1@SPDEF!1.20!14.93!SPDEF;;chr3:189507460..189507471,+!p3@TP63!1.18!14.04!TP63;;chrX:56258844..56258882,+!p1@KLF8!1.14!17.61!KLF8;;chr14:37131058..37131139,+!p1@PAX9!1.13!12.63!PAX9;;chr3:101568349..101568365,+!p1@NFKBIZ!1.12!628.75!NFKBIZ;;chr6:10415484..10415508,-!p3@TFAP2A!1.11!11.87!TFAP2A;;chr1:37945588..37945604,+!p3@ZC3H12A!1.11!11.74!ZC3H12A;;chr8:49833948..49833973,-!p2@SNAI2!1.08!69.93!SNAI2;;chr12:27485762..27485776,+!p3@ARNTL2!1.08!29.73!ARNTL2;;chr11:120107344..120107351,+!p1@POU2F3!1.08!13.53!POU2F3;;chr6:34524049..34524089,-!p2@SPDEF!1.07!10.72!SPDEF;;chr19:42636586..42636607,-!p1@POU2F2!1.06!29.35!POU2F2;;chr6:34524025..34524045,-!p3@SPDEF!1.06!10.46!SPDEF;;chr6:126240380..126240430,+!p2@NCOA7!1.05!26.67!NCOA7;;chr12:66218003..66218018,+!p9@HMGA2!1.04!12.25!HMGA2;;chr14:75745523..75745537,+!p1@FOS!1.03!1182.71!FOS;;chr13:73633131..73633149,+!p1@KLF5!1.03!105.79!KLF5;;chr2:122042770..122042785,-!p1@TFCP2L1!1.03!9.70!TFCP2L1;;chrY:2803415..2803468,+!p1@ZFY!1.03!9.70!ZFY;;chr6:15246217..15246228,+!p3@JARID2!1.02!16.84!JARID2;;chr12:66218152..66218174,+!p10@HMGA2!1.02!10.08!HMGA2;;chr11:34645791..34645836,+!p3@EHF!1.02!9.57!EHF;;chrX:85403445..85403479,+!p2@DACH2!1.02!9.44!DACH2;;chr12:66218573..66218596,+!p7@HMGA2!1.01!13.78!HMGA2;;chr19:52598958..52599026,-!p1@ZNF841!1.00!87.16!ZNF841;;chr17:7492684..7492778,-!p2@SOX15!1.00!19.27!SOX15;;chr12:66218378..66218401,+!p6@HMGA2!1.00!14.17!HMGA2;;chr8:102504690..102504704,+!p3@GRHL2!1.00!9.06!GRHL2;;chr18:42260840..42260860,+!p2@SETBP1!1.00!8.93!SETBP1;;chr8:49833978..49833996,-!p1@SNAI2!0.99!184.40!SNAI2;;chr11:47236584..47236679,+!p1@DDB2!0.99!96.99!DDB2;;chr6:10413188..10413249,-!p7@TFAP2A!0.98!8.55!TFAP2A;;chr4:87857474..87857489,+!p7@AFF1!0.97!14.93!AFF1;;chr6:10412576..10412599,-!p5@TFAP2A!0.97!8.42!TFAP2A;;chr15:67418047..67418093,+!p4@SMAD3!0.96!10.34!SMAD3;;chr2:60778035..60778060,-!p4@BCL11A!0.96!9.83!BCL11A;;chr1:201979703..201979721,+!p2@ELF3!0.96!8.04!ELF3;;chr3:141087339..141087387,+!p2@ZBTB38!0.95!84.22!ZBTB38;;chr14:62162285..62162296,+!p3@HIF1A!0.95!42.62!HIF1A;;chr11:34642656..34642667,+!p2@EHF!0.95!7.91!EHF;;chr1:61547811..61547837,+!p7@NFIA!0.94!11.36!NFIA;;chr7:28725740..28725778,+!p1@CREB5!0.93!69.80!CREB5;;chr1:24646263..24646277,+!p4@GRHL3!0.93!7.53!GRHL3;;chr11:16629261..16629284,-!p1@SOX6!0.93!7.53!SOX6;;chr18:42260920..42260951,+!p4@SETBP1!0.92!7.40!SETBP1;;chr8:102504979..102505010,+!p2@GRHL2!0.92!7.27!GRHL2;;chr1:158979792..158979814,+!p2@IFI16!0.91!71.72!IFI16;;chr3:111314230..111314241,-!p2@ZBED2!0.90!6.89!ZBED2;;chr17:80797886..80797906,-!p1@ZNF750!0.90!6.89!ZNF750;;chr1:37940170..37940190,+!p1@ZC3H12A!0.89!88.31!ZC3H12A;;chr2:70142232..70142251,+!p1@MXD1!0.89!40.33!MXD1;;chr11:6947720..6947812,+!p1@ZNF215!0.89!9.06!ZNF215;;chr21:36260343..36260402,-!p6@RUNX1!0.88!10.97!RUNX1;;chr20:3388238..3388323,-!p1@C20orf194!0.87!47.34!C20orf194;;chr6:126240442..126240459,+!p4@NCOA7!0.87!8.29!NCOA7;;chr18:42260861..42260882,+!p5@SETBP1!0.87!6.38!SETBP1;;chr12:66218420..66218439,+!p12@HMGA2!0.87!6.38!HMGA2;;chr12:66218904..66218913,+!p11@HMGA2!0.87!6.38!HMGA2;;chr2:238600933..238600985,+!p3@LRRFIP1!0.86!35.48!LRRFIP1;;chr20:45142154..45142227,-!p1@ZNF334!0.86!12.76!ZNF334;;chr14:38064429..38064486,-!p1@FOXA1!0.86!6.25!FOXA1;;chr3:32023232..32023273,+!p1@ZNF860!0.85!8.93!ZNF860;;chr11:6947647..6947698,+!p2@ZNF215!0.85!8.55!ZNF215;;chr9:14314566..14314618,-!p1@NFIB!0.84!76.06!NFIB;;chr1:61547894..61547968,+!p2@NFIA!0.84!18.38!NFIA;;chr2:166326200..166326216,+!p1@CSRNP3!0.84!8.93!CSRNP3;;chr12:66218443..66218461,+!p8@HMGA2!0.84!7.78!HMGA2;;chr10:31607335..31607354,+!p5@ZEB1!0.84!6.00!ZEB1;;chr3:141087562..141087594,+!p12@ZBTB38!0.84!6.00!ZBTB38;;chr12:66218923..66218934,+!p14@HMGA2!0.83!5.74!HMGA2;;chrY:21906623..21906637,-!p3@KDM5D!0.83!5.74!KDM5D;;chr5:137801160..137801176,+!p1@EGR1!0.82!606.29!EGR1;;chr1:61548225..61548299,+!p1@NFIA!0.82!78.74!NFIA;;chr21:30671235..30671253,+!p1@BACH1!0.82!76.70!BACH1;;chr14:62162258..62162269,+!p2@HIF1A!0.82!58.19!HIF1A;;chr6:168227552..168227609,+!p1@MLLT4!0.82!49.77!MLLT4;;chr13:41593425..41593480,-!p1@ELF1!0.82!38.54!ELF1;;chr2:178257401..178257432,-!p4@NFE2L2!0.82!33.94!NFE2L2;;chr2:208030886..208030917,-!p4@KLF7!0.82!11.23!KLF7;;chr2:169312600..169312606,+!p2@CERS6!0.82!9.19!CERS6;;chr2:148779187..148779222,+!p5@MBD5!0.82!7.40!MBD5;;chr15:83953373..83953386,-!p2@BNC1!0.82!5.61!BNC1;;chr4:87856129..87856186,+!p1@AFF1!0.81!80.52!AFF1;;chr11:128392273..128392308,-!p2@ETS1!0.81!24.63!ETS1;;chr12:80084303..80084332,-!p1@PAWR!0.80!34.20!PAWR;;chr2:85360499..85360598,+!p1@TCF7L1!0.80!32.16!TCF7L1;;chr1:61547781..61547809,+!p5@NFIA!0.80!11.23!NFIA;;chr6:15245797..15245818,+!p8@JARID2!0.80!6.51!JARID2;;chr3:69915385..69915438,+!p3@MITF!0.80!5.36!MITF;;chr6:15246261..15246312,+!p1@JARID2!0.79!137.44!JARID2;;chr18:72265084..72265143,+!p1@ZNF407!0.79!41.73!ZNF407;;chr5:138609782..138609826,+!p5@MATR3!0.79!36.62!MATR3;;chr9:139294614..139294633,-!p@chr9:139294614..139294633,-!0.79!35.22!SNAPC4;;chr3:141087393..141087426,+!p3@ZBTB38!0.79!22.20!ZBTB38;;chr20:3388541..3388575,-!p2@C20orf194!0.79!21.82!C20orf194;;chr2:148778570..148778589,+!p4@MBD5!0.79!17.10!MBD5;;chr2:10091815..10091864,+!p1@GRHL1!0.79!7.15!GRHL1;;chr22:21771656..21771662,+!p1@HIC2!0.79!5.23!HIC2;;chr1:201979743..201979762,+!p1@ELF3!0.79!5.10!ELF3;;chr2:220094514..220094599,+!p1@ANKZF1!0.78!159.13!ANKZF1;;chr4:106068026..106068084,+!p1@TET2!0.78!49.13!TET2;;chr19:24269981..24270007,+!p2@ZNF254!0.78!35.09!ZNF254;;chrX:56258811..56258838,+!p2@KLF8!0.77!6.76!KLF8;;chr20:42136308..42136358,+!p2@L3MBTL1!0.77!6.64!L3MBTL;;chr10:3827389..3827408,-!p1@KLF6!0.76!407.72!KLF6;;chr1:59249688..59249703,-!p3@JUN!0.76!31.14!JUN;;chr19:9785724..9785740,-!p2@ZNF562!0.75!20.29!ZNF562;;chr13:74708372..74708409,-!p4@KLF12!0.75!11.49!KLF12;;chr21:36260295..36260310,-!p3@RUNX1!0.75!7.91!RUNX1;;chr12:125002827..125002855,-!p5@NCOR2!0.75!6.76!NCOR2;;chr5:43067636..43067674,+!p6@ZNF131!0.75!6.51!ZNF131;;chr8:128747661..128747703,+!p6@MYC!0.75!6.51!MYC;;chr20:55204351..55204377,+!p1@TFAP2C!0.75!6.13!TFAP2C;;chr19:9811347..9811351,-!p1@ZNF812!0.75!4.59!ZNF812;;chr1:209979449..209979460,-!p3@IRF6!0.75!4.59!IRF6;;chr16:86612320..86612394,+!p1@FOXL1!0.75!4.59!FOXL1;;chr3:169381183..169381205,-!p4@MECOM!0.75!4.59!MECOM;;chr10:21823128..21823216,+!p1@MLLT10!0.74!45.43!MLLT10;;chr2:231084639..231084654,-!p2@SP110!0.74!7.78!SP110;;chr6:1312325..1312340,+!p1@FOXQ1!0.74!7.66!FOXQ1;;chr2:63277948..63277974,+!p1@OTX1!0.74!4.47!OTX1;;chr1:209979375..209979386,-!p4@IRF6!0.74!4.47!IRF6;;chr1:2985726..2985752,+!p2@PRDM16!0.74!4.47!PRDM16;;chr8:128748308..128748324,+!p2@MYC!0.73!137.31!MYC;;chr12:77459306..77459365,-!p1@E2F7!0.73!60.74!E2F7;;chr2:148778652..148778672,+!p1@MBD5!0.73!60.49!MBD5;;chr6:116989916..116989979,-!p1@ZUFSP!0.73!45.69!ZUFSP;;chr6:28321971..28321995,-!p1@ZNF323!0.73!4.34!ZNF323;;chr1:2985760..2985774,+!p1@PRDM16!0.73!4.34!PRDM16;;chr3:88108381..88108450,+!p1@ENST00000473136!0.72!51.56!ZNF654;;chr1:158979851..158979865,+!p5@IFI16!0.72!10.08!IFI16;;chr3:42947600..42947680,+!p1@ZNF662!0.72!6.38!ZNF662;;chr6:28048343..28048354,+!p1@ZNF165!0.72!4.21!ZNF165;;chr1:249153268..249153298,-!p1@ZNF692!0.71!25.14!ZNF692;;chr12:96588279..96588299,+!p4@ELK3!0.71!21.95!ELK3;;chr1:158979872..158979898,+!p3@IFI16!0.71!13.91!IFI16;;chr7:113726357..113726443,+!p1@FOXP2!0.71!7.53!FOXP2;;chr7:86782094..86782108,+!p5@DMTF1!0.71!7.02!DMTF1;;chr4:87857491..87857519,+!p10@AFF1!0.71!6.00!AFF1;;chr19:58341656..58341694,+!p5@ZNF587!0.71!5.10!ZNF587;;chr7:99156011..99156036,+!p7@ZNF655!0.71!4.98!ZNF655;;chr3:101575889..101575903,+!p3@NFKBIZ!0.71!4.08!NFKBIZ;;chr21:36260980..36261011,-!p1@RUNX1!0.70!130.55!RUNX1;;chr2:169312725..169312810,+!p1@CERS6!0.70!112.04!CERS6;;chr16:73092898..73092931,-!p1@ZFHX3!0.70!17.23!ZFHX3;;chr4:87857433..87857472,+!p9@AFF1!0.70!7.66!AFF1;;chr12:80084279..80084293,-!p8@PAWR!0.70!7.02!PAWR;;chr14:69261310..69261326,-!p5@ZFP36L1!0.70!5.49!ZFP36L1;;chr16:67197654..67197716,+!p3@HSF4!0.70!3.96!HSF4;;chr16:67881647..67881663,-!p3@CENPT!0.70!3.96!CENPT;;chr4:103422499..103422632,+!p1@NFKB1!0.69!94.31!NFKB1;;chr19:9695169..9695188,-!p1@ZNF121!0.69!79.38!ZNF121;;chr3:168864315..168864339,-!p2@MECOM!0.69!6.89!MECOM;;chr3:5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| ||
Line 39: | Line 43: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.fractionation.hCAGE/Small%2520Airway%2520Epithelial%2520Cells%252c%2520donor3%2520%2528nuclear%2520fraction%2529.CNhs12583.14317-155D6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.fractionation.hCAGE/Small%2520Airway%2520Epithelial%2520Cells%252c%2520donor3%2520%2528nuclear%2520fraction%2529.CNhs12583.14317-155D6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.fractionation.hCAGE/Small%2520Airway%2520Epithelial%2520Cells%252c%2520donor3%2520%2528nuclear%2520fraction%2529.CNhs12583.14317-155D6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.fractionation.hCAGE/Small%2520Airway%2520Epithelial%2520Cells%252c%2520donor3%2520%2528nuclear%2520fraction%2529.CNhs12583.14317-155D6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.fractionation.hCAGE/Small%2520Airway%2520Epithelial%2520Cells%252c%2520donor3%2520%2528nuclear%2520fraction%2529.CNhs12583.14317-155D6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:14317-155D6 | |id=FF:14317-155D6 | ||
|is_a=EFO:0002091;;FF:0000673 | |is_a=EFO:0002091;;FF:0000673 | ||
|is_obsolete= | |is_obsolete= | ||
| | |library_id=CNhs12583 | ||
|library_id_phase_based=2:CNhs12583 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;14317 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10014.GATCAG.14317 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;14317 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10014.GATCAG.14317 | |||
|name=Small Airway Epithelial Cells, donor3 (nuclear fraction) | |name=Small Airway Epithelial Cells, donor3 (nuclear fraction) | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 48: | Line 64: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12583,LSID912,release012,COMPLETED | |profile_hcage=CNhs12583,LSID912,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10014,,, | |profile_srnaseq=SRhi10014,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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Line 64: | Line 81: | ||
|rna_tube_id=155D6 | |rna_tube_id=155D6 | ||
|rna_weight_ug=6.60663 | |rna_weight_ug=6.60663 | ||
|rnaseq_library_id=RDhi10013!SRhi10014.GATCAG | |||
|sample_age=50 | |sample_age=50 | ||
|sample_category=fractionations and perturbations | |sample_category=fractionations and perturbations | ||
Line 87: | Line 105: | ||
|top_motifs=TP53:3.25364987107;TBX4,5:2.08816224083;ELK1,4_GABP{A,B1}:2.04935497626;FOXP1:1.8056025833;VSX1,2:1.72896047218;NKX2-1,4:1.70723681626;FOXN1:1.62383431313;SP1:1.61841808623;TEF:1.57842619925;HIF1A:1.56728889411;XCPE1{core}:1.53158286656;PITX1..3:1.51967666835;ONECUT1,2:1.47946658583;TEAD1:1.46147854878;ADNP_IRX_SIX_ZHX:1.43670087259;STAT1,3:1.3959422338;TLX2:1.35233894843;RBPJ:1.34662201895;ZBTB16:1.30242896194;HBP1_HMGB_SSRP1_UBTF:1.10985557485;ZEB1:1.10088158831;NRF1:1.0376582149;POU1F1:1.01257049458;FOS_FOS{B,L1}_JUN{B,D}:0.9521009122;ELF1,2,4:0.945317082804;SNAI1..3:0.936886440277;ZNF143:0.880431386886;CREB1:0.878720676386;NKX2-3_NKX2-5:0.840166022549;TFDP1:0.824483715487;MAZ:0.822286102475;ZFP161:0.765203759997;SOX17:0.730538346851;BACH2:0.676666614279;POU2F1..3:0.601485045341;PDX1:0.56816653206;FOSL2:0.547683803434;MED-1{core}:0.539498856979;FOXA2:0.522849554426;bHLH_family:0.510482607588;NKX3-2:0.454914396936;EP300:0.444721500873;NANOG:0.440697042218;HMGA1,2:0.427763828879;TFAP2{A,C}:0.418108124719;NFE2:0.410238342995;POU6F1:0.360643516124;NFY{A,B,C}:0.337521195222;STAT5{A,B}:0.329470985907;EGR1..3:0.316252380768;PAX2:0.308203672174;RFX2..5_RFXANK_RFXAP:0.304998868607;T:0.303699992012;AHR_ARNT_ARNT2:0.295025997707;GLI1..3:0.263088229705;NFIL3:0.260708691271;EN1,2:0.242356791692;ATF4:0.234134806162;FOXQ1:0.232112143627;E2F1..5:0.228204333708;TFAP2B:0.225568538076;SOX2:0.222873809085;SPZ1:0.221218653737;ZNF148:0.220417504326;CDX1,2,4:0.218716598104;NKX6-1,2:0.216932682449;PAX8:0.201552728671;IKZF1:0.201545490282;HOXA9_MEIS1:0.197100218736;ALX4:0.182151782705;EVI1:0.170343632261;DBP:0.142688059585;FOXL1:0.136339196323;HOX{A4,D4}:0.112652052438;CEBPA,B_DDIT3:0.107274288522;BPTF:0.0919234573404;GTF2A1,2:0.0749575340279;AR:0.0684862284401;ATF5_CREB3:0.0513943130329;ETS1,2:0.0505816528219;HLF:0.0485149106944;MTE{core}:0.0456653392741;MYBL2:0.0262149048244;FOX{D1,D2}:0.0157581457633;OCT4_SOX2{dimer}:0.00808487504161;GFI1:0.00474751496339;RFX1:0.00165246591495;GFI1B:-0.0178902830781;ARID5B:-0.0622371572514;TFCP2:-0.0724939358265;HMX1:-0.0748774344517;GTF2I:-0.0903387345163;HIC1:-0.0920055169627;IRF7:-0.0922778558007;LMO2:-0.0992644705675;GZF1:-0.0997265416111;ATF2:-0.134186691611;TOPORS:-0.135215564749;NFIX:-0.139178981092;NFKB1_REL_RELA:-0.156876269388;LHX3,4:-0.164770969095;RXR{A,B,G}:-0.169342493528;YY1:-0.176514783833;NKX3-1:-0.207663464369;MYB:-0.209124886752;PAX4:-0.238186669674;MTF1:-0.259674542624;SOX{8,9,10}:-0.265537334753;TLX1..3_NFIC{dimer}:-0.276270853905;NR1H4:-0.281572435123;MYOD1:-0.287523888531;PRRX1,2:-0.313598910332;BREu{core}:-0.322567002556;ALX1:-0.329173810373;PAX5:-0.33293258289;TBP:-0.337522248343;FOXO1,3,4:-0.360615740756;JUN:-0.362858888519;ZNF238:-0.365865196222;HNF1A:-0.368860640704;POU3F1..4:-0.380532096145;CDC5L:-0.384077462994;SPIB:-0.390966324483;SPI1:-0.404065277838;EBF1:-0.410469896758;SRF:-0.410756774071;MZF1:-0.413228088958;SMAD1..7,9:-0.416493726399;HSF1,2:-0.423303380318;LEF1_TCF7_TCF7L1,2:-0.431831559682;AIRE:-0.432968669694;NKX2-2,8:-0.445909860227;PRDM1:-0.464677258527;ZIC1..3:-0.493055065468;FOXM1:-0.523486422096;ZNF384:-0.523853426273;HAND1,2:-0.532585444619;CRX:-0.533377696748;CUX2:-0.552037350165;NFE2L2:-0.55775780379;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.56254537435;NR3C1:-0.578813200856;GATA6:-0.581606474524;SREBF1,2:-0.601497599927;RUNX1..3:-0.620152543028;PAX1,9:-0.620595165179;FOXP3:-0.622145250796;FOX{I1,J2}:-0.637931913956;PATZ1:-0.646295132053;GCM1,2:-0.66314681521;ZBTB6:-0.66355308797;TGIF1:-0.664269242645;NHLH1,2:-0.670449220995;HOX{A6,A7,B6,B7}:-0.674146559764;STAT2,4,6:-0.683401187514;NFATC1..3:-0.716875198504;HNF4A_NR2F1,2:-0.723069574474;KLF4:-0.726695418308;UFEwm:-0.757092840375;REST:-0.764320743306;PAX6:-0.774548300517;GATA4:-0.805001610744;ESR1:-0.819169482469;RREB1:-0.820706859728;IKZF2:-0.823807219638;MEF2{A,B,C,D}:-0.83273360637;HOX{A5,B5}:-0.865252657533;IRF1,2:-0.905674927015;MYFfamily:-0.939859390632;POU5F1:-0.958470618075;DMAP1_NCOR{1,2}_SMARC:-0.964720917445;NR5A1,2:-0.994479022957;NFE2L1:-1.02152032717;FOX{F1,F2,J1}:-1.08096120262;PAX3,7:-1.14507391056;FOXD3:-1.19143846676;PBX1:-1.19599044053;XBP1:-1.23615268242;RORA:-1.26224890954;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.34930597479;MAFB:-1.40448100583;PPARG:-1.42121626886;TAL1_TCF{3,4,12}:-1.42391582539;ZNF423:-1.46444593495;RXRA_VDR{dimer}:-1.47355019678;NANOG{mouse}:-1.47810399866;ATF6:-1.53297154212;TFAP4:-1.59578774643;NR6A1:-1.70525097666;SOX5:-1.88008336827;ESRRA:-2.22442466164;HES1:-2.51635578231 | |top_motifs=TP53:3.25364987107;TBX4,5:2.08816224083;ELK1,4_GABP{A,B1}:2.04935497626;FOXP1:1.8056025833;VSX1,2:1.72896047218;NKX2-1,4:1.70723681626;FOXN1:1.62383431313;SP1:1.61841808623;TEF:1.57842619925;HIF1A:1.56728889411;XCPE1{core}:1.53158286656;PITX1..3:1.51967666835;ONECUT1,2:1.47946658583;TEAD1:1.46147854878;ADNP_IRX_SIX_ZHX:1.43670087259;STAT1,3:1.3959422338;TLX2:1.35233894843;RBPJ:1.34662201895;ZBTB16:1.30242896194;HBP1_HMGB_SSRP1_UBTF:1.10985557485;ZEB1:1.10088158831;NRF1:1.0376582149;POU1F1:1.01257049458;FOS_FOS{B,L1}_JUN{B,D}:0.9521009122;ELF1,2,4:0.945317082804;SNAI1..3:0.936886440277;ZNF143:0.880431386886;CREB1:0.878720676386;NKX2-3_NKX2-5:0.840166022549;TFDP1:0.824483715487;MAZ:0.822286102475;ZFP161:0.765203759997;SOX17:0.730538346851;BACH2:0.676666614279;POU2F1..3:0.601485045341;PDX1:0.56816653206;FOSL2:0.547683803434;MED-1{core}:0.539498856979;FOXA2:0.522849554426;bHLH_family:0.510482607588;NKX3-2:0.454914396936;EP300:0.444721500873;NANOG:0.440697042218;HMGA1,2:0.427763828879;TFAP2{A,C}:0.418108124719;NFE2:0.410238342995;POU6F1:0.360643516124;NFY{A,B,C}:0.337521195222;STAT5{A,B}:0.329470985907;EGR1..3:0.316252380768;PAX2:0.308203672174;RFX2..5_RFXANK_RFXAP:0.304998868607;T:0.303699992012;AHR_ARNT_ARNT2:0.295025997707;GLI1..3:0.263088229705;NFIL3:0.260708691271;EN1,2:0.242356791692;ATF4:0.234134806162;FOXQ1:0.232112143627;E2F1..5:0.228204333708;TFAP2B:0.225568538076;SOX2:0.222873809085;SPZ1:0.221218653737;ZNF148:0.220417504326;CDX1,2,4:0.218716598104;NKX6-1,2:0.216932682449;PAX8:0.201552728671;IKZF1:0.201545490282;HOXA9_MEIS1:0.197100218736;ALX4:0.182151782705;EVI1:0.170343632261;DBP:0.142688059585;FOXL1:0.136339196323;HOX{A4,D4}:0.112652052438;CEBPA,B_DDIT3:0.107274288522;BPTF:0.0919234573404;GTF2A1,2:0.0749575340279;AR:0.0684862284401;ATF5_CREB3:0.0513943130329;ETS1,2:0.0505816528219;HLF:0.0485149106944;MTE{core}:0.0456653392741;MYBL2:0.0262149048244;FOX{D1,D2}:0.0157581457633;OCT4_SOX2{dimer}:0.00808487504161;GFI1:0.00474751496339;RFX1:0.00165246591495;GFI1B:-0.0178902830781;ARID5B:-0.0622371572514;TFCP2:-0.0724939358265;HMX1:-0.0748774344517;GTF2I:-0.0903387345163;HIC1:-0.0920055169627;IRF7:-0.0922778558007;LMO2:-0.0992644705675;GZF1:-0.0997265416111;ATF2:-0.134186691611;TOPORS:-0.135215564749;NFIX:-0.139178981092;NFKB1_REL_RELA:-0.156876269388;LHX3,4:-0.164770969095;RXR{A,B,G}:-0.169342493528;YY1:-0.176514783833;NKX3-1:-0.207663464369;MYB:-0.209124886752;PAX4:-0.238186669674;MTF1:-0.259674542624;SOX{8,9,10}:-0.265537334753;TLX1..3_NFIC{dimer}:-0.276270853905;NR1H4:-0.281572435123;MYOD1:-0.287523888531;PRRX1,2:-0.313598910332;BREu{core}:-0.322567002556;ALX1:-0.329173810373;PAX5:-0.33293258289;TBP:-0.337522248343;FOXO1,3,4:-0.360615740756;JUN:-0.362858888519;ZNF238:-0.365865196222;HNF1A:-0.368860640704;POU3F1..4:-0.380532096145;CDC5L:-0.384077462994;SPIB:-0.390966324483;SPI1:-0.404065277838;EBF1:-0.410469896758;SRF:-0.410756774071;MZF1:-0.413228088958;SMAD1..7,9:-0.416493726399;HSF1,2:-0.423303380318;LEF1_TCF7_TCF7L1,2:-0.431831559682;AIRE:-0.432968669694;NKX2-2,8:-0.445909860227;PRDM1:-0.464677258527;ZIC1..3:-0.493055065468;FOXM1:-0.523486422096;ZNF384:-0.523853426273;HAND1,2:-0.532585444619;CRX:-0.533377696748;CUX2:-0.552037350165;NFE2L2:-0.55775780379;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.56254537435;NR3C1:-0.578813200856;GATA6:-0.581606474524;SREBF1,2:-0.601497599927;RUNX1..3:-0.620152543028;PAX1,9:-0.620595165179;FOXP3:-0.622145250796;FOX{I1,J2}:-0.637931913956;PATZ1:-0.646295132053;GCM1,2:-0.66314681521;ZBTB6:-0.66355308797;TGIF1:-0.664269242645;NHLH1,2:-0.670449220995;HOX{A6,A7,B6,B7}:-0.674146559764;STAT2,4,6:-0.683401187514;NFATC1..3:-0.716875198504;HNF4A_NR2F1,2:-0.723069574474;KLF4:-0.726695418308;UFEwm:-0.757092840375;REST:-0.764320743306;PAX6:-0.774548300517;GATA4:-0.805001610744;ESR1:-0.819169482469;RREB1:-0.820706859728;IKZF2:-0.823807219638;MEF2{A,B,C,D}:-0.83273360637;HOX{A5,B5}:-0.865252657533;IRF1,2:-0.905674927015;MYFfamily:-0.939859390632;POU5F1:-0.958470618075;DMAP1_NCOR{1,2}_SMARC:-0.964720917445;NR5A1,2:-0.994479022957;NFE2L1:-1.02152032717;FOX{F1,F2,J1}:-1.08096120262;PAX3,7:-1.14507391056;FOXD3:-1.19143846676;PBX1:-1.19599044053;XBP1:-1.23615268242;RORA:-1.26224890954;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.34930597479;MAFB:-1.40448100583;PPARG:-1.42121626886;TAL1_TCF{3,4,12}:-1.42391582539;ZNF423:-1.46444593495;RXRA_VDR{dimer}:-1.47355019678;NANOG{mouse}:-1.47810399866;ATF6:-1.53297154212;TFAP4:-1.59578774643;NR6A1:-1.70525097666;SOX5:-1.88008336827;ESRRA:-2.22442466164;HES1:-2.51635578231 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:14317-155D6;search_select_hide=table117:FF:14317-155D6 | |||
| | |||
}} | }} |
Latest revision as of 19:06, 4 June 2020
Name: | Small Airway Epithelial Cells, donor3 (nuclear fraction) |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs12583 |
Sample type: | fractionations and perturbations |
Genomic View: | UCSC |
RefEX: | Specific genes |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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RNA-Seq Accession numbers | |||||||||||||||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12583
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12583
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.137 |
10 | 10 | 0.139 |
100 | 100 | 0.994 |
101 | 101 | 0.482 |
102 | 102 | 0.725 |
103 | 103 | 0.159 |
104 | 104 | 0.842 |
105 | 105 | 0.919 |
106 | 106 | 0.011 |
107 | 107 | 0.168 |
108 | 108 | 0.441 |
109 | 109 | 0.502 |
11 | 11 | 0.0887 |
110 | 110 | 0.642 |
111 | 111 | 0.681 |
112 | 112 | 0.214 |
113 | 113 | 0.945 |
114 | 114 | 0.103 |
115 | 115 | 0.123 |
116 | 116 | 0.162 |
117 | 117 | 0.977 |
118 | 118 | 0.676 |
119 | 119 | 0.254 |
12 | 12 | 0.457 |
120 | 120 | 0.653 |
121 | 121 | 0.57 |
122 | 122 | 0.88 |
123 | 123 | 0.737 |
124 | 124 | 0.0173 |
125 | 125 | 0.31 |
126 | 126 | 0.521 |
127 | 127 | 0.44 |
128 | 128 | 0.0194 |
129 | 129 | 0.515 |
13 | 13 | 0.874 |
130 | 130 | 0.244 |
131 | 131 | 0.473 |
132 | 132 | 0.668 |
133 | 133 | 0.00237 |
134 | 134 | 0.258 |
135 | 135 | 0.0552 |
136 | 136 | 0.334 |
137 | 137 | 0.171 |
138 | 138 | 0.817 |
139 | 139 | 0.00693 |
14 | 14 | 0.903 |
140 | 140 | 0.321 |
141 | 141 | 0.631 |
142 | 142 | 0.132 |
143 | 143 | 0.00273 |
144 | 144 | 0.186 |
145 | 145 | 0.892 |
146 | 146 | 0.951 |
147 | 147 | 0.878 |
148 | 148 | 0.0118 |
149 | 149 | 0.0176 |
15 | 15 | 0.0274 |
150 | 150 | 0.641 |
151 | 151 | 0.513 |
152 | 152 | 0.871 |
153 | 153 | 0.875 |
154 | 154 | 0.968 |
155 | 155 | 0.753 |
156 | 156 | 0.65 |
157 | 157 | 0.536 |
158 | 158 | 0.599 |
159 | 159 | 0.343 |
16 | 16 | 0.219 |
160 | 160 | 0.0246 |
161 | 161 | 0.28 |
162 | 162 | 0.904 |
163 | 163 | 0.991 |
164 | 164 | 0.983 |
165 | 165 | 0.665 |
166 | 166 | 0.721 |
167 | 167 | 0.654 |
168 | 168 | 0.526 |
169 | 169 | 0.061 |
17 | 17 | 0.231 |
18 | 18 | 0.0145 |
19 | 19 | 0.0278 |
2 | 2 | 0.412 |
20 | 20 | 0.24 |
21 | 21 | 0.273 |
22 | 22 | 0.198 |
23 | 23 | 0.252 |
24 | 24 | 0.989 |
25 | 25 | 0.247 |
26 | 26 | 0.689 |
27 | 27 | 0.043 |
28 | 28 | 0.52 |
29 | 29 | 0.684 |
3 | 3 | 0.513 |
30 | 30 | 0.965 |
31 | 31 | 0.414 |
32 | 32 | 0.00379 |
33 | 33 | 0.985 |
34 | 34 | 0.303 |
35 | 35 | 0.0322 |
36 | 36 | 0.305 |
37 | 37 | 0.339 |
38 | 38 | 0.662 |
39 | 39 | 0.703 |
4 | 4 | 0.655 |
40 | 40 | 0.374 |
41 | 41 | 0.0787 |
42 | 42 | 0.643 |
43 | 43 | 0.133 |
44 | 44 | 0.00394 |
45 | 45 | 0.885 |
46 | 46 | 0.0505 |
47 | 47 | 0.278 |
48 | 48 | 0.608 |
49 | 49 | 0.0938 |
5 | 5 | 0.159 |
50 | 50 | 0.634 |
51 | 51 | 0.189 |
52 | 52 | 0.469 |
53 | 53 | 0.463 |
54 | 54 | 0.205 |
55 | 55 | 0.918 |
56 | 56 | 0.508 |
57 | 57 | 0.674 |
58 | 58 | 0.206 |
59 | 59 | 0.0185 |
6 | 6 | 0.725 |
60 | 60 | 0.145 |
61 | 61 | 0.416 |
62 | 62 | 0.0309 |
63 | 63 | 0.669 |
64 | 64 | 0.122 |
65 | 65 | 0.135 |
66 | 66 | 0.912 |
67 | 67 | 0.637 |
68 | 68 | 0.67 |
69 | 69 | 0.0853 |
7 | 7 | 0.507 |
70 | 70 | 0.148 |
71 | 71 | 0.237 |
72 | 72 | 0.376 |
73 | 73 | 0.961 |
74 | 74 | 0.0138 |
75 | 75 | 0.365 |
76 | 76 | 0.369 |
77 | 77 | 0.147 |
78 | 78 | 0.955 |
79 | 79 | 0.0148 |
8 | 8 | 0.0277 |
80 | 80 | 0.152 |
81 | 81 | 0.0688 |
82 | 82 | 0.0418 |
83 | 83 | 0.0575 |
84 | 84 | 0.862 |
85 | 85 | 0.0334 |
86 | 86 | 0.368 |
87 | 87 | 0.769 |
88 | 88 | 0.444 |
89 | 89 | 0.0539 |
9 | 9 | 0.136 |
90 | 90 | 0.54 |
91 | 91 | 0.383 |
92 | 92 | 0.0552 |
93 | 93 | 0.718 |
94 | 94 | 0.0377 |
95 | 95 | 0.625 |
96 | 96 | 0.209 |
97 | 97 | 0.66 |
98 | 98 | 0.0969 |
99 | 99 | 0.936 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12583
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000673 human Small Airway Epithelial Cells, nuclear fraction sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0002076 (endo-epithelial cell)
0002368 (respiratory epithelial cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0004119 (endoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0000065 (respiratory tract)
0001004 (respiratory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000408 (cellular fractionation sample)
0000350 (experimentally modified sample)
0000166 (human small airway epithelial cell sample)
0000406 (nuclear fraction sample)
0000673 (human Small Airway Epithelial Cells, nuclear fraction sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000223 (endodermal cell)