FF:640-42C6: Difference between revisions

Latest revision as of 19:18, 4 June 2020

Name:	lung, neonate N00
Species:	Mouse (Mus musculus)
Library ID:	CNhs11224
Sample type:	developmental
Genomic View:	UCSC
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	C57BL/6J
tissue	lung
dev stage	0 day neonate
sex	mixture
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004963

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11224		CAGE		DRX009037		DRR009911

Accession ID Mm9

Library id		BAM		CTSS
CNhs11224		DRZ001336		DRZ002719

Accession ID Mm10

Library id		BAM		CTSS
CNhs11224		DRZ012686		DRZ014069

Download raw sequence, BAM & CTSS

Mm9

Fasta	BAM	CTSS
download	download	donwload

Mm10

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

CNhs11224

0	0
1	0
10	0
100	0
1000	0.00159
1001	0.15
1002	0.092
1003	0.065
1004	0
1005	0.143
1006	0
1007	0.157
1008	0
1009	0.395
101	-0.0995
1010	0
1011	-0.0976
1012	0.0926
1013	0.0846
1014	0.203
1015	-0.0993
1016	0.36
1017	0
1018	0.251
1019	0
102	0
1020	0
1021	0
1022	0.139
1023	0
1024	0.594
1025	1.122
1026	0
1027	0
1028	0.0774
1029	0.424
103	0.198
1030	0
1031	0.433
1032	0.0236
1033	0
1034	0.164
1035	0.0774
1036	-0.151
1037	0
1038	0.42
1039	-0.0351
104	0
1040	0.491
1041	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11224

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.101
MA0003.1	MA0003.1	0.319
MA0004.1	MA0004.1	0.0398
MA0006.1	MA0006.1	0.0401
MA0007.1	MA0007.1	0.809
MA0009.1	MA0009.1	0.807
MA0014.1	MA0014.1	0.916
MA0017.1	MA0017.1	4.4892e-4
MA0018.2	MA0018.2	0.00905
MA0019.1	MA0019.1	0.701
MA0024.1	MA0024.1	3.20136e-4
MA0025.1	MA0025.1	0.726
MA0027.1	MA0027.1	0.442
MA0028.1	MA0028.1	3.07922e-4
MA0029.1	MA0029.1	0.952
MA0030.1	MA0030.1	0.0302
MA0031.1	MA0031.1	2.95792e-4
MA0035.2	MA0035.2	0.338
MA0038.1	MA0038.1	0.523
MA0039.2	MA0039.2	0.0771
MA0040.1	MA0040.1	0.8
MA0041.1	MA0041.1	0.304
MA0042.1	MA0042.1	0.654
MA0043.1	MA0043.1	0.533
MA0046.1	MA0046.1	7.94682e-4
MA0047.2	MA0047.2	4.78816e-8
MA0048.1	MA0048.1	0.486
MA0050.1	MA0050.1	0.181
MA0051.1	MA0051.1	0.165
MA0052.1	MA0052.1	0.458
MA0055.1	MA0055.1	0.198
MA0057.1	MA0057.1	0.727
MA0058.1	MA0058.1	0.00647
MA0059.1	MA0059.1	2.10902e-4
MA0060.1	MA0060.1	4.65224e-6
MA0061.1	MA0061.1	0.544
MA0062.2	MA0062.2	4.03486e-5
MA0065.2	MA0065.2	0.0106
MA0066.1	MA0066.1	0.0677
MA0067.1	MA0067.1	0.78
MA0068.1	MA0068.1	0.544
MA0069.1	MA0069.1	0.484
MA0070.1	MA0070.1	0.521
MA0071.1	MA0071.1	0.0261
MA0072.1	MA0072.1	0.133
MA0073.1	MA0073.1	0.574
MA0074.1	MA0074.1	0.755
MA0076.1	MA0076.1	2.43981e-4
MA0077.1	MA0077.1	0.545
MA0078.1	MA0078.1	0.0302
MA0079.2	MA0079.2	0.0164
MA0080.2	MA0080.2	0.7
MA0081.1	MA0081.1	0.797
MA0083.1	MA0083.1	2.33364e-4
MA0084.1	MA0084.1	0.515
MA0087.1	MA0087.1	0.465
MA0088.1	MA0088.1	0.0412
MA0090.1	MA0090.1	0.00879
MA0091.1	MA0091.1	0.39
MA0092.1	MA0092.1	0.836
MA0093.1	MA0093.1	0.0393
MA0099.2	MA0099.2	0.695
MA0100.1	MA0100.1	0.314
MA0101.1	MA0101.1	0.974
MA0102.2	MA0102.2	0.156
MA0103.1	MA0103.1	0.746
MA0104.2	MA0104.2	9.46635e-5
MA0105.1	MA0105.1	0.0172
MA0106.1	MA0106.1	0.157
MA0107.1	MA0107.1	0.169
MA0108.2	MA0108.2	0.0246
MA0111.1	MA0111.1	0.77
MA0112.2	MA0112.2	0.131
MA0113.1	MA0113.1	0.357
MA0114.1	MA0114.1	7.62592e-6
MA0115.1	MA0115.1	0.0694
MA0116.1	MA0116.1	0.0159
MA0117.1	MA0117.1	0.259
MA0119.1	MA0119.1	0.386
MA0122.1	MA0122.1	0.49
MA0124.1	MA0124.1	0.128
MA0125.1	MA0125.1	0.522
MA0131.1	MA0131.1	0.29
MA0135.1	MA0135.1	0.708
MA0136.1	MA0136.1	0.0111
MA0137.2	MA0137.2	0.43
MA0138.2	MA0138.2	0.239
MA0139.1	MA0139.1	0.391
MA0140.1	MA0140.1	0.976
MA0141.1	MA0141.1	8.72131e-5
MA0142.1	MA0142.1	0.031
MA0143.1	MA0143.1	0.103
MA0144.1	MA0144.1	0.61
MA0145.1	MA0145.1	0.0189
MA0146.1	MA0146.1	0.312
MA0147.1	MA0147.1	1.59698e-5
MA0148.1	MA0148.1	4.07844e-6
MA0149.1	MA0149.1	0.733
MA0150.1	MA0150.1	0.00399
MA0152.1	MA0152.1	0.362
MA0153.1	MA0153.1	3.68861e-4
MA0154.1	MA0154.1	0.92
MA0155.1	MA0155.1	0.349
MA0156.1	MA0156.1	0.441
MA0157.1	MA0157.1	0.0395
MA0159.1	MA0159.1	0.0214
MA0160.1	MA0160.1	0.00239
MA0162.1	MA0162.1	0.768
MA0163.1	MA0163.1	0.00704
MA0164.1	MA0164.1	0.501
MA0258.1	MA0258.1	0.129
MA0259.1	MA0259.1	0.0444

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11224

Novel motif	Logo	P-value
1	1	0.258
10	10	0.0558
100	100	0.309
101	101	0.62
102	102	0.279
103	103	0.466
104	104	0.942
105	105	0.785
106	106	0.0123
107	107	0.00392
108	108	0.997
109	109	0.462
11	11	0.209
110	110	0.294
111	111	0.274
112	112	0.512
113	113	0.539
114	114	0.669
115	115	0.445
116	116	0.395
117	117	0.0575
118	118	0.893
119	119	0.906
12	12	0.632
120	120	0.171
121	121	0.567
122	122	0.96
123	123	0.862
124	124	0.784
125	125	0.99
126	126	0.458
127	127	0.252
128	128	0.0395
129	129	1
13	13	0.154
130	130	0.148
131	131	0.221
132	132	0.258
133	133	0.808
134	134	0.922
135	135	0.887
136	136	0.214
137	137	0.648
138	138	0.0139
139	139	0.274
14	14	0.992
140	140	0.323
141	141	0.336
142	142	0.595
143	143	0.158
144	144	0.703
145	145	0.211
146	146	0.752
147	147	0.257
148	148	0.583
149	149	0.409
15	15	0.536
150	150	0.117
151	151	0.455
152	152	0.0117
153	153	0.517
154	154	0.579
155	155	0.99
156	156	0.656
157	157	0.785
158	158	0.363
159	159	0.0495
160	160	0.593
161	161	0.75
162	162	0.394
163	163	0.289
164	164	0.743
165	165	0.336
166	166	0.431
167	167	0.163
168	168	0.391
169	169	0.445
17	17	0.938
18	18	0.00693
19	19	0.365
2	2	0.31
20	20	0.841
21	21	0.632
22	22	0.266
23	23	0.281
24	24	0.644
25	25	0.0183
26	26	0.695
27	27	0.255
28	28	0.995
29	29	0.0557
3	3	0.503
30	30	0.676
31	31	0.498
32	32	0.341
33	33	0.757
34	34	0.951
35	35	0.00429
36	36	0.313
37	37	0.387
38	38	0.928
39	39	0.0816
4	4	0.402
40	40	0.868
41	41	0.352
42	42	0.572
43	43	0.966
44	44	0.146
45	45	0.296
46	46	0.323
47	47	0.16
48	48	0.169
49	49	0.589
5	5	0.508
50	50	0.279
51	51	0.886
52	52	0.0467
53	53	0.944
54	54	0.935
55	55	0.598
56	56	0.888
57	57	0.242
58	58	0.424
59	59	0.513
6	6	0.468
60	60	0.101
61	61	0.817
62	62	0.151
63	63	0.878
64	64	0.107
65	65	0.987
66	66	0.117
67	67	0.884
68	68	0.436
69	69	0.799
7	7	0.895
70	70	0.404
71	71	0.109
72	72	0.157
73	73	0.196
74	74	0.566
75	75	0.0745
76	76	0.957
77	77	0.273
78	78	0.559
79	79	0.832
8	8	0.114
80	80	0.317
81	81	0.00889
82	82	0.424
83	83	0.408
84	84	0.594
85	85	0.914
86	86	0.984
87	87	0.00499
88	88	0.841
89	89	0.361
9	9	0.354
90	90	0.00225
91	91	0.386
92	92	0.775
93	93	0.782
94	94	0.031
95	95	0.539
96	96	0.159
97	97	0.553
98	98	0.28
99	99	0.807

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11224

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011394 mouse lung- neonate N00 sample

part_of relathionship
UBERON:0000170 pair of lungs

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0002048 (lung)
0002100 (trunk)
0000479 (tissue)
0004119 (endoderm-derived structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0005178 (thoracic cavity element)
0005177 (trunk region element)
0000117 (respiratory tube)
0000171 (respiration organ)
0000464 (anatomical space)
0005181 (thoracic segment organ)
0010317 (germ layer / neural crest derived structure)
0000065 (respiratory tract)
0000170 (pair of lungs)
0001004 (respiratory system)
0002224 (thoracic cavity)
0000915 (thoracic segment of trunk)

FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000004 (tissue sample)
0000303 (neonate sample - mouse)
0000304 (mouse neonate N0 sample)
0011394 (mouse lung- neonate N00 sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0001041 (foregut)
UBERON:0008947 (respiratory primordium)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)

@@ Line 1: / Line 1: @@
 {{f5samples
-|DRA_sample_Accession=CAGE@DRS008900
+|DRA_sample_Accession=CAGE@SAMD00004963
+|accession_numbers=CAGE;DRX009037;DRR009911;DRZ001336;DRZ002719;DRZ012686;DRZ014069
 |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002048,UBERON:0002100,UBERON:0000479,UBERON:0004119,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0005178,UBERON:0005177,UBERON:0000117,UBERON:0000171,UBERON:0000464,UBERON:0005181,UBERON:0010317,UBERON:0000065,UBERON:0000170,UBERON:0001004,UBERON:0002224,UBERON:0000915
 |ancestors_in_cell_lineage_facet=
@@ Line 8: / Line 9: @@
 |created_by=
 |creation_date=
-|datafreeze_phase=1
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr10:22539932..22539956,-!p1@Tcf21!2.29!494.66!Tcf21;;chr5:77543897..77543911,-!p2@Hopx!1.99!181.28!Hopx;;chr11:85699862..85699920,+!p1@Tbx4!1.96!89.76!Tbx4;;chr12:57636034..57636087,-!p1@Nkx2-1!1.87!72.78!Nkx2-1;;chr8:123608252..123608268,+!p1@Foxf1a!1.84!100.30!Foxf1a;;chr13:72101161..72101177,-!p2@Irx1!1.83!90.74!Irx1;;chr12:57636220..57636236,-!p3@Nkx2-1!1.71!49.76!Nkx2-1;;chr12:57636178..57636194,-!p2@Nkx2-1!1.68!47.03!Nkx2-1;;chr2:103264213..103264233,+!p1@Elf5!1.66!44.49!Elf5;;chr12:57636240..57636256,-!p4@Nkx2-1!1.56!35.71!Nkx2-1;;chr11:116196664..116196679,-!p1@Foxj1!1.53!50.34!Foxj1;;chr9:48644037..48644067,-!p2@Zbtb16!1.50!73.96!Zbtb16;;chr13:72101178..72101203,-!p1@Irx1!1.50!46.44!Irx1;;chr2:147871627..147871641,-!p1@Foxa2!1.47!28.68!Foxa2;;chr13:72101141..72101158,-!p3@Irx1!1.46!34.54!Irx1;;chr13:72766279..72766296,+!p2@Irx2!1.43!37.86!Irx2;;chr13:72766250..72766273,+!p1@Irx2!1.40!37.27!Irx2;;chr1:120524520..120524528,+!p1@Tfcp2l1!1.37!63.42!Tfcp2l1;;chr7:17647736..17647772,-!p1@Hif3a!1.35!73.96!Hif3a;;chr11:85646303..85646329,+!p1@Tbx2!1.32!128.79!Tbx2;;chr2:180069370..180069409,-!p1@Gata5!1.31!22.83!Gata5;;chr11:85646469..85646488,+!p5@Tbx2!1.26!25.76!Tbx2;;chr17:87153462..87153473,+!p3@Epas1!1.25!63.03!Epas1;;chr12:58646974..58647003,-!p1@Foxa1!1.25!22.44!Foxa1;;chr13:31717548..31717596,+!p1@Foxf2!1.23!31.81!Foxf2;;chr6:52154386..52154407,-!p2@Hoxa5!1.23!20.29!Hoxa5;;chr6:88148650..88148669,+!p1@Gata2!1.22!127.62!Gata2;;chr12:57637732..57637777,-!p5@Nkx2-1!1.22!15.42!Nkx2-1;;chr11:85646341..85646352,+!p3@Tbx2!1.21!29.47!Tbx2;;chr1:4483679..4483695,-!p1@Sox17!1.19!67.91!Sox17;;chr6:128250380..128250442,-!p2@Tead4!1.18!17.95!Tead4;;chr5:77543935..77543947,-!p4@Hopx!1.18!14.24!Hopx;;chr12:37835141..37835194,+!p1@Meox2!1.16!41.76!Meox2;;chr11:85646427..85646451,+!p4@Tbx2!1.16!23.61!Tbx2;;chr3:30408674..30408716,-!p2@Mecom!1.16!22.25!Mecom;;chrX:137077716..137077734,-!p1@Tsc22d3!1.15!93.08!Tsc22d3;;chr12:57637595..57637608,-!p7@Nkx2-1!1.14!12.88!Nkx2-1;;chr8:94881733..94881790,+!p1@Irx5!1.13!24.20!Irx5;;chr6:52154414..52154462,-!p1@Hoxa5!1.11!16.39!Hoxa5;;chr17:87153240..87153254,+!p1@Epas1!1.09!222.06!Epas1;;chr2:103264245..103264268,+!p2@Elf5!1.09!11.32!Elf5;;chr17:87153028..87153049,+!p2@Epas1!1.08!227.53!Epas1;;chr12:37835120..37835133,+!p2@Meox2!1.05!14.83!Meox2;;chr18:52775562..52775650,+!p1@Zfp474!1.05!10.34!Zfp474;;chr11:85703483..85703508,+!p2@Tbx4!1.05!10.15!Tbx4;;chr5:77524250..77524300,-!p1@Hopx!1.04!201.38!Hopx;;chr4:55545337..55545357,-!p1@Klf4!1.04!148.50!Klf4;;chr11:85646263..85646278,+!p2@Tbx2!1.04!25.56!Tbx2;;chr1:4486453..4486470,-!p3@Sox17!1.04!12.88!Sox17;;chr9:48644013..48644027,-!p5@Zbtb16!1.04!12.29!Zbtb16;;chr18:53623836..53623839,+!p1@Prdm6!1.04!11.71!Prdm6;;chr5:98609885..98609900,+!p1@Prdm8!1.03!9.76!Prdm8;;chr18:11052642..11052659,+!p1@Gata6!1.01!47.61!Gata6;;chr11:83664365..83664383,+!p1@Hnf1b!0.98!8.59!Hnf1b;;chr9:48644306..48644364,-!p1@Zbtb16!0.97!34.34!Zbtb16;;chr8:94325321..94325366,-!p1@Irx3!0.97!20.68!Irx3;;chr17:87153440..87153451,+!p4@Epas1!0.95!16.59!Epas1;;chr5:120285144..120285160,+!p1@Tbx5!0.95!8.00!Tbx5;;chr2:147871948..147871977,-!p3@Foxa2!0.95!8.00!Foxa2;;chr3:30408603..30408668,-!p1@Mecom!0.94!18.34!Mecom;;chr1:4486481..4486501,-!p2@Sox17!0.94!11.51!Sox17;;chr12:57637700..57637717,-!p9@Nkx2-1!0.93!7.42!Nkx2-1;;chr6:128250471..128250519,-!p1@Tead4!0.92!15.03!Tead4;;chr4:148275237..148275311,+!p2@Casz1!0.91!30.64!Casz1;;chr16:15887371..15887385,+!p1@Cebpd!0.90!248.01!Cebpd;;chr14:64562503..64562524,+!p1@Sox7!0.90!42.93!Sox7;;chr7:6649134..6649167,-!p1@Zim1!0.89!38.83!Zim1;;chr17:87153519..87153533,+!p5@Epas1!0.89!10.15!Epas1;;chr2:181406327..181406350,-!p1@Sox18!0.88!215.62!Sox18;;chr12:36219645..36219730,-!p1@Ahr!0.88!68.49!Ahr;;chr7:119822957..119822980,+!p2@Tead1!0.88!33.95!Tead1;;chr2:167363692..167363710,+!p1@Snai1!0.85!79.03!Snai1;;chr8:94881872..94881887,+!p2@Irx5!0.85!6.63!Irx5;;chr9:24578720..24578735,-!p1@Tbx20!0.85!6.05!Tbx20;;chr5:77524175..77524186,-!p8@Hopx!0.85!6.05!Hopx;;chr11:96213288..96213332,+!p@chr11:96213288..96213332,+!0.84!10.34!Hoxb2;;chr17:87153505..87153516,+!p6@Epas1!0.84!8.39!Epas1;;chr5:77524231..77524245,-!p3@Hopx!0.83!15.03!Hopx;;chr8:74842952..74842970,+!p1@Klf2!0.82!402.95!Klf2;;chr16:95680889..95680991,-!p1@Erg!0.82!49.56!Erg;;chr5:120120667..120120685,+!p3@Tbx3!0.82!11.12!Tbx3;;chr4:122911086..122911112,+!p1@Heyl!0.81!68.88!Heyl;;chr18:11052606..11052633,+!p4@Gata6!0.80!14.24!Gata6;;chr11:70043257..70043263,-!p1@Bcl6b!0.80!9.56!Bcl6b;;chr4:55545051..55545110,-!p2@Klf4!0.80!6.83!Klf4;;chr11:85699562..85699575,+!p6@Tbx4!0.80!5.27!Tbx4;;chr19:5424089..5424106,-!p10@Drap1!0.80!5.27!Drap1;;chr1:120524563..120524591,+!p2@Tfcp2l1!0.80!5.27!Tfcp2l1;;chr10:67599319..67599360,-!p2@Arid5b!0.79!62.44!Arid5b;;chr15:81633165..81633188,+!p2@Tef!0.79!45.86!Tef;;chr3:8666963..8666978,-!p1@Hey1!0.79!36.49!Hey1;;chr6:90412582..90412601,+!p1@Klf15!0.79!26.54!Klf15;;chr2:103143336..103143367,-!p1@Ehf!0.79!8.78!Ehf;;chr9:48644284..48644305,-!p4@Zbtb16!0.79!7.02!Zbtb16;;chr10:12810631..12810649,+!p1@Plagl1!0.78!144.79!Plagl1;;chr13:99954640..99954681,+!p1@Zfp366!0.78!19.71!Zfp366;;chr5:77544170..77544181,-!p6@Hopx!0.78!5.07!Hopx;;chr14:99697871..99697934,+!p1@Klf5!0.77!106.74!Klf5;;chr1:137155026..137155042,-!p1@Elf3!0.77!31.22!Elf3;;chr6:14851440..14851497,+!p2@Foxp2!0.77!12.88!Foxp2;;chr8:94325814..94325839,-!p2@Irx3!0.77!10.73!Irx3;;chr8:94325486..94325510,-!p4@Irx3!0.77!6.63!Irx3;;chr7:35904304..35904320,+!p1@Cebpa!0.76!106.74!Cebpa;;chr13:5860776..5860796,+!p1@Klf6!0.75!123.71!Klf6;;chr19:23215673..23215753,+!p1@Klf9!0.75!73.96!Klf9;;chr9:63869751..63869767,-!p1@Smad6!0.75!13.07!Smad6;;chr9:63869802..63869815,-!p3@Smad6!0.75!9.76!Smad6;;chr12:37835203..37835218,+!p3@Meox2!0.75!5.66!Meox2;;chr12:37835219..37835230,+!p5@Meox2!0.75!4.68!Meox2;;chr6:90412608..90412630,+!p2@Klf15!0.74!9.95!Klf15;;chr2:167514456..167514473,+!p1@Cebpb!0.73!216.21!Cebpb;;chr16:22439654..22439676,-!p2@Etv5!0.73!28.68!Etv5;;chr17:56970339..56970428,-!p1@Rfx2!0.73!14.83!Rfx2;;chr15:102087880..102087927,-!p2@Rarg!0.73!10.73!Rarg;;chr17:28487603..28487626,-!p2@Tead3!0.73!9.95!Tead3;;chr9:96159147..96159204,+!p2@Tfdp2!0.73!8.78!Tfdp2;;chr6:128250521..128250543,-!p3@Tead4!0.73!7.22!Tead4;;chr6:98978245..98978289,-!p1@Foxp1!0.72!71.03!Foxp1;;chr6:72185232..72185272,-!p1@Atoh8!0.72!13.46!Atoh8;;chr15:81633203..81633215,+!p3@Tef!0.72!7.02!Tef;;chr1:135320962..135320981,-!p2@Sox13!0.71!15.22!Sox13;;chr11:96164821..96164865,+!p1@Hoxb5!0.71!4.10!Hoxb5;;chr12:37835248..37835260,+!p4@Meox2!0.71!4.10!Meox2;;chr3:34548909..34548927,+!p1@Sox2!0.70!7.22!Sox2;;chr4:135840573..135840601,+!p1@Zfp46!0.69!34.54!Zfp46;;chr7:71083428..71083518,-!p3@Klf13!0.69!33.95!Klf13;;chr16:14705925..14705951,+!p1@Snai2!0.69!31.42!Snai2;;chr6:14851287..14851342,+!p1@Foxp2!0.69!14.24!Foxp2;;chr6:72185210..72185228,-!p3@Atoh8!0.69!7.02!Atoh8;;chr8:94325779..94325791,-!p7@Irx3!0.69!3.90!Irx3;;chr15:37162796..37162828,+!p1@Grhl2!0.68!6.83!Grhl2;;chr8:24780125..24780143,+!p1@Zmat4!0.68!5.85!Zmat4;;chr16:92697560..92697592,-!p2@Runx1!0.67!26.54!Runx1;;chr5:120121020..120121049,+!p1@Tbx3!0.67!25.95!Tbx3;;chr18:80909801..80909819,-!p1@Nfatc1!0.67!24.78!Nfatc1;;chr4:119406389..119406411,+!p1@Hivep3!0.67!20.49!Hivep3;;chr6:99216488..99216534,-!p2@Foxp1!0.67!11.51!Foxp1;;chr1:186556323..186556370,-!p2@Hlx!0.67!11.12!Hlx;;chr12:77278238..77278252,-!p1@Esr2!0.67!3.71!Esr2;;chr12:57637882..57637924,-!p6@Nkx2-1!0.67!3.71!Nkx2-1;;chr12:57637649..57637665,-!p8@Nkx2-1!0.67!3.71!Nkx2-1;;chr11:85703335..85703350,+!p4@Tbx4!0.67!3.71!Tbx4;;chr10:92773591..92773623,-!p1@Elk3!0.66!93.27!Elk3;;chr9:48644429..48644462,-!p3@Zbtb16!0.66!7.61!Zbtb16;;chr9:63869729..63869749,-!p4@Smad6!0.66!7.61!Smad6;;chr4:55545152..55545194,-!p3@Klf4!0.66!4.29!Klf4;;chr16:22439681..22439698,-!p1@Etv5!0.65!71.61!Etv5;;chr14:22807107..22807119,-!p2@Zfp503!0.65!17.56!Zfp503;;chr2:91035197..91035237,-!p1@Nr1h3!0.65!7.81!Nr1h3;;chr4:135840623..135840632,+!p5@Zfp46!0.65!4.88!Zfp46;;chr2:164228702..164228719,+!p1@Rbpjl!0.65!3.51!Rbpjl;;chr11:52096804..52096896,-!p1@Tcf7!0.64!32.20!Tcf7;;chr4:154010918..154010931,-!p1@Prdm16!0.64!11.12!Prdm16;;chr4:154010940..154010962,-!p3@Prdm16!0.64!8.20!Prdm16;;chr5:77524304..77524315,-!p5@Hopx!0.64!7.81!Hopx;;chr7:119822915..119822936,+!p5@Tead1!0.64!6.05!Tead1;;chr15:103085660..103085681,-!p1@Nfe2!0.64!5.46!Nfe2;;chr1:4486505..4486527,-!p5@Sox17!0.64!4.68!Sox17;;chr8:94325273..94325288,-!p5@Irx3!0.64!4.29!Irx3;;chr5:137042233..137042245,-!p4@Cux1!0.64!4.10!Cux1;;chr9:63869918..63869936,-!p9@Smad6!0.64!3.32!Smad6;;chr1:135320989..135321043,-!p1@Sox13!0.63!42.93!Sox13;;chr19:37509324..37509337,+!p1@Hhex!0.63!27.32!Hhex;;chr2:152758901..152758925,-!p1@Foxs1!0.63!16.78!Foxs1;;chr4:148178559..148178603,+!p1@Casz1!0.63!10.73!Casz1;;chr8:87225702..87225726,+!p3@Lyl1!0.63!7.22!Lyl1;;chr6:52114821..52114828,-!p1@Hoxa2!0.63!5.27!Hoxa2;;chr16:95924055..95924077,+!p1@Ets2!0.62!205.67!Ets2;;chr19:26679654..26679675,+!p1@Smarca2!0.62!35.71!Smarca2;;chr6:144730427..144730508,-!p1@Sox5!0.62!22.83!Sox5;;chr2:163028808..163028869,+!p1@Tox2!0.62!13.27!Tox2;;chr2:92886419..92886455,-!p2@Prdm11!0.62!6.83!Prdm11;;chr12:113916993..113917009,+!p2@Zbtb42!0.62!5.85!Zbtb42;;chr6:14851250..14851277,+!p4@Foxp2!0.62!4.29!Foxp2;;chr4:94718861..94718872,-!p2@Jun!0.61!27.71!Jun;;chr16:14705961..14705978,+!p2@Snai2!0.61!16.98!Snai2;;chr1:186556410..186556424,-!p1@Hlx!0.61!11.12!Hlx;;chr12:113917014..113917034,+!p1@Zbtb42!0.61!6.05!Zbtb42;;chr9:32503590..32503680,+!p1@Ets1!0.60!131.52!Ets1;;chr11:98821749..98821799,+!p2@Rara!0.60!22.64!Rara;;chr18:11052485..11052508,+!p2@Gata6!0.60!9.56!Gata6;;chr10:80870405..80870428,-!p4@Nfic!0.60!9.17!Nfic;;chr9:96653072..96653154,-!p1@Zbtb38!0.60!9.17!Zbtb38;;chr13:99954688..99954710,+!p2@Zfp366!0.60!6.44!Zfp366;;chr15:81633224..81633235,+!p5@Tef!0.60!3.90!Tef;;chr9:32349174..32349187,-!p6@Fli1!0.60!3.51!Fli1;;chr17:34730333..34730362,+!p2@Pbx2!0.59!13.46!Pbx2;;chr5:125538737..1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pi1!0.49!4.88!Sfpi1;;chr17:37140628..37140631,+!p2@Zfp57!0.49!4.88!Zfp57;;chr9:63869834..63869849,-!p5@Smad6!0.49!4.10!Smad6;;chr2:163028888..163028905,+!p3@Tox2!0.49!2.73!Tox2;;chr7:74517658..74517731,-!p1@Mef2a!0.48!123.91!Mef2a;;chr1:133904183..133904211,+!p1@Elk4!0.48!23.22!Elk4;;chr1:194979315..194979359,+!p1@Irf6!0.48!16.20!Irf6;;chr11:16908650..16908690,-!p1@Plek!0.48!16.20!Plek;;chr10:126726021..126726053,-!p4@Mbd6!0.48!8.78!Mbd6;;chr2:160698288..160698358,-!p3@Zhx3!0.48!7.81!Zhx3;;chr11:96213434..96213452,+!p@chr11:96213434..96213452,+!0.48!2.93!Hoxb2;;chr3:29912079..29912096,-!p10@Mecom!0.48!2.34!Mecom;;chr19:10315179..10315241,-!p1@Gm98!0.47!27.51!Gm98;;chr14:98568971..98569025,-!p1@Dach1!0.47!20.29!Dach1;;chr14:98569030..98569059,-!p3@Dach1!0.47!12.29!Dach1;;chr19:26681672..26681716,+!p5@Smarca2!0.47!10.73!Smarca2;;chr8:92872242..92872285,-!p1@Tox3!0.47!6.24!Tox3;;chr10:26093876..26093894,-!p2@L3mbtl3!0.47!5.66!L3mbtl3;;chr2:70313168..70313184,+!p1@Sp5!0.47!3.32!Sp5;;chr9:63869705..63869713,-!p8@Smad6!0.47!2.54!Smad6;;chr17:26978409..26978442,-!p1@Nkx2-5!0.47!1.95!Nkx2-5;;chr6:115372099..115372121,+!p5@Pparg!0.47!1.95!Pparg;;chr6:88148324..88148328,+!p3@Gata2!0.47!1.95!Gata2;;chr11:96180069..96180089,+!p3@Hoxb4!0.47!1.95!Hoxb4;;chr8:47825107..47825145,+!p1@Irf2!0.46!105.57!Irf2;;chr11:18918959..18918976,-!p2@Meis1!0.46!35.12!Meis1;;chr18:80904854..80904919,-!p2@Nfatc1!0.46!30.83!Nfatc1;;chr10:107769168..107769215,+!p1@Pawr!0.46!26.34!Pawr;;chr3:94176733..94176794,+!p1@Rorc!0.46!19.71!Rorc;;chr5:140267476..140267493,+!p1@Mafk!0.46!14.24!Mafk;;chr2:90936901..90936945,+!p1@Sfpi1!0.46!13.07!Sfpi1;;chr7:26067242..26067273,+!p3@Cic!0.46!10.54!Cic;;chr7:19946556..19946611,+!p1@Ppp1r13l!0.46!9.76!Ppp1r13l;;chr14:79881330..79881415,+!p3@Elf1!0.46!8.20!Elf1;;chr14:65568469..65568511,-!p2@Hmbox1!0.46!8.00!Hmbox1;;chr2:133377954..133377973,+!p1@Bmp2!0.46!7.81!Bmp2;;chr4:63064364..63064384,-!p1@Akna!0.46!7.02!Akna;;chr18:55152179..55152194,-!p5@Zfp608!0.46!6.83!Zfp608;;chr10:67599375..67599386,-!p3@Arid5b!0.46!4.10!Arid5b;;chr10:67599432..67599444,-!p4@Arid5b!0.46!3.51!Arid5b;;chr4:135700687..135700719,+!p2@Id3!0.46!3.32!Id3;;chr7:77505617..77505632,-!p1@Nr2f2!0.45!119.03!Nr2f2;;chr6:48395743..48395820,-!p1@Zfp467!0.45!54.05!Zfp467;;chr5:104121391..104121450,+!p3@Aff1!0.45!12.68!Aff1;;chr1:39250584..39250643,+!p1@Npas2!0.45!12.29!Npas2;;chr19:28754692..28754757,-!p1@Glis3!0.45!10.15!Glis3;;chr3:87945895..87945946,+!p2@Mef2d!0.45!7.61!Mef2d;;chr18:7004715..7004731,-!p1@Mkx!0.45!5.46!Mkx;;chr4:114732112..114732158,+!p1@Tal1!0.45!4.88!Tal1;;chr2:90936978..90937023,+!p3@Sfpi1!0.45!4.10!Sfpi1;;chr6:52167513..52167549,-!p2@Hoxa7!0.45!2.93!Hoxa7;;chr1:38684383..38684394,-!p4@Aff3!0.45!2.73!Aff3;;chr12:81213989..81214006,-!p1@Zfp36l1!0.44!128.98!Zfp36l1;;chr8:118231723..118231740,-!p1@Maf!0.44!55.22!Maf;;chr7:52471143..52471186,+!p1@Tead2!0.44!26.34!Tead2;;chr18:55152206..55152251,-!p1@Zfp608!0.44!23.81!Zfp608;;chr14:14845141..14845207,+!p1@Atxn7!0.44!17.17!Atxn7;;chr8:97856080..97856150,-!p2@Zfp319!0.44!14.05!Zfp319;;chr2:44968737..44968758,-!p2@Zeb2!0.44!13.66!Zeb2;;chr2:92886297..92886329,-!p1@Prdm11!0.44!10.93!Prdm11;;chr6:39068210..39068251,-!p1@Parp12!0.44!10.93!Parp12;;chr4:82151622..82151643,-!p4@Nfib!0.44!9.76!Nfib;;chr2:44968721..44968734,-!p6@Zeb2!0.44!8.78!Zeb2;;chr14:65977459..65977489,+!p3@Zfp395!0.44!8.20!Zfp395;;chr12:87027598..87027652,+!p1@Batf!0.44!5.07!Batf;;chr7:87170879..87170914,+!p2@Zfp710!0.44!5.07!Zfp710;;chr3:135354903..135354945,-!p7@Nfkb1!0.44!5.07!Nfkb1;;chr10:92773708..92773734,-!p3@Elk3!0.44!4.29!Elk3;;chr18:79306577..79306592,-!p3@Setbp1!0.44!4.29!Setbp1;;chr11:18918820..18918831,-!p4@Meis1!0.44!4.10!Meis1;;chr4:119486912..119486954,+!p3@Hivep3!0.44!3.71!Hivep3;;chrX:103070839..103070856,-!p4@Atrx!0.44!3.12!Atrx;;chr19:5560600..5560617,-!p1@Ovol1!0.44!2.34!Ovol1;;chr11:83664334..83664353,+!p2@Hnf1b!0.44!1.76!Hnf1b;;chr3:9610090..9610124,-!p1@Zfp704!0.43!31.81!Zfp704;;chr4:128483347..128483411,-!p2@Zfp362!0.43!17.76!Zfp362;;chr15:79177964..79177986,+!p1@Maff!0.43!7.81!Maff;;chr9:63869850..63869873,-!p2@Smad6!0.43!6.63!Smad6;;chr2:44966659..44966675,-!p7@Zeb2!0.43!6.44!Zeb2;;chr6:38204087..38204108,-!p2@D630045J12Rik!0.43!6.44!D630045J12Rik;;chr4:148178529..148178548,+!p3@Casz1!0.43!5.07!Casz1;;chr4:151235776..151235788,-!p5@Camta1!0.43!3.51!Camta1;;chr15:102087737..102087801,-!p3@Rarg!0.43!3.32!Rarg;;chr11:97524680..97524700,+!p3@Mllt6!0.43!2.93!Mllt6;;chr14:22808697..22808715,-!p4@Zfp503!0.43!2.15!Zfp503;;chr17:13897509..13897607,+!p1@Mllt4!0.42!70.25!Mllt4;;chr18:75527009..75527027,+!p1@Smad7!0.42!50.34!Smad7;;chr17:28487692..28487765,-!p1@Tead3!0.42!46.83!Tead3;;chr12:85559785..85559840,-!p1@C130039O16Rik!0.42!31.22!C130039O16Rik;;chr17:23004085..23004108,-!p1@Zfp945!0.42!23.03!Zfp945;;chr11:53164285..53164302,+!p3@Aff4!0.42!19.51!Aff4;;chr5:34530293..34530318,-!p2@Mxd4!0.42!13.07!Mxd4;;chr10:79389784..79389833,+!p1@Arid3a!0.42!12.10!Arid3a;;chr10:79390075..79390115,+!p2@Arid3a!0.4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2f2;;chr6:88143711..88143717,+!p2@Gata2!0.33!2.34!Gata2;;chr19:28754600..28754612,-!p2@Glis3!0.33!2.34!Glis3;;chr1:135557526..135557551,-!p1@Zbed6!0.33!2.34!Zbed6;;chr12:9581317..9581333,+!p3@Osr1!0.33!2.15!Osr1;;chr9:32348906..32348920,-!p3@Fli1!0.33!1.95!Fli1;;chr10:44178493..44178520,-!p3@Prdm1!0.33!1.95!Prdm1;;chr7:134169648..134169657,-!p14@Maz!0.33!1.95!Maz;;chr6:16848347..16848391,-!p1@Tfec!0.33!1.76!Tfec;;chr11:52096066..52096081,-!p2@Tcf7!0.33!1.56!Tcf7;;chr5:137043112..137043157,-!p1@Cux1!0.32!176.79!Cux1;;chr16:30065419..30065437,+!p1@Hes1!0.32!99.71!Hes1;;chr9:111020574..111020687,+!p1@Lrrfip2!0.32!83.32!Lrrfip2;;chr8:109817400..109817417,+!p1@Nfat5!0.32!39.61!Nfat5;;chr10:80599279..80599353,+!p1@Zbtb7a!0.32!33.56!Zbtb7a;;chr19:53403914..53403968,+!p2@Mxi1!0.32!20.68!Mxi1;;chr6:140572167..140572236,+!p2@Aebp2!0.32!18.73!Aebp2;;chr3:98186361..98186443,+!p1@Zfp697!0.32!18.34!Zfp697;;chr4:128483534..128483613,-!p1@Zfp362!0.32!12.68!Zfp362;;chr17:88840082..88840127,+!p1@Foxn2!0.32!12.68!Foxn2;;chr4:43575544..43575565,+!p2@Creb3!0.32!10.54!Creb3;;chr5:65194720..65194738,+!p2@Klf3!0.32!9.76!Klf3;;chr16:87699206..87699229,+!p3@Bach1!0.32!9.56!Bach1;;chr2:44968775..44968795,-!p4@Zeb2!0.32!8.39!Zeb2;;chr11:6375884..6375920,-!p2@Purb!0.32!6.05!Purb;;chr7:87171047..87171078,+!p1@Zfp710!0.32!5.66!Zfp710;;chr6:92041399..92041417,+!p2@Nr2c2!0.32!5.66!Nr2c2;;chr4:126700722..126700753,+!p4@Sfpq!0.32!3.90!Sfpq;;chr4:87452200..87452229,-!p2@Mllt3!0.32!3.32!Mllt3;;chr2:153475381..153475419,+!p3@Dnmt3b!0.32!3.12!Dnmt3b;;chr18:76400986..76401016,+!p5@Smad2!0.32!2.93!Smad2;;chr1:170361777..170361797,-!p10@Pbx1!0.32!2.54!Pbx1;;chr7:71083729..71083742,-!p4@Klf13!0.32!2.54!Klf13;;chr2:91864449..91864492,-!p3@Creb3l1!0.32!2.34!Creb3l1;;chr1:38684431..38684450,-!p3@Aff3!0.32!2.34!Aff3;;chr3:54559550..54559570,+!p4@Smad9!0.32!1.95!Smad9;;chr6:72185179..72185196,-!p4@Atoh8!0.32!1.76!Atoh8;;chr1:64167889..64167898,-!p8@Klf7!0.32!1.76!Klf7;;chr17:51971960..51971979,-!p1@Satb1!0.32!1.76!Satb1;;chr10:126779021..126779032,-!p2@Gli1!0.32!1.56!Gli1;;chr10:107769219..107769226,+!p5@Pawr!0.32!1.56!Pawr;;chr7:38558544..38558566,-!p4@Zfp536!0.32!1.37!Zfp536;;chr19:28754622..28754633,-!p4@Glis3!0.32!1.37!Glis3;;chr7:119822841..119822887,+!p1@Tead1!0.31!58.54!Tead1;;chr1:170362273..170362317,-!p1@Pbx1!0.31!52.10!Pbx1;;chr10:127080031..127080090,+!p1@Stat6!0.31!40.00!Stat6;;chr8:73905806..73905876,-!p1@Nr2f6!0.31!38.83!Nr2f6;;chr15:102455867..102455930,-!p1@Atf7!0.31!23.03!Atf7;;chr9:121669118..121669179,+!p1@Zfp651!0.31!19.32!Zfp651;;chr18:39649430..39649522,-!p2@Nr3c1!0.31!17.76!Nr3c1;;chr11:53164378..53164392,+!p2@Aff4!0.31!15.42!Aff4;;chr4:133309531..133309581,-!p4@Arid1a!0.31!7.02!Arid1a;;chr8:72498217..72498232,-!p8@Gatad2a!0.31!6.24!Gatad2a;;chr8:72662966..72662991,-!p3@LOC100048268,p3@Rfxank!0.31!5.85!Rfxank;;chr2:152223881..152223933,-!p3@Sox12!0.31!5.46!Sox12;;chr17:56970481..56970551,-!p2@Rfx2!0.31!5.07!Rfx2;;chr2:181100223..181100237,+!p4@Zgpat!0.31!4.29!Zgpat;;chr13:56804865..56804898,+!p3@Smad5!0.31!4.10!Smad5;;chr8:81923398..81923409,-!p4@Smad1!0.31!3.90!Smad1;;chr18:75528166..75528170,+!p3@Smad7!0.31!3.90!Smad7;;chr5:65194789..65194800,+!p7@Klf3!0.31!3.90!Klf3;;chr3:90097217..90097233,+!p3@Gatad2b!0.31!3.71!Gatad2b;;chr18:76401074..76401118,+!p3@Smad2!0.31!3.51!Smad2;;chr1:93698030..93698064,+!p1@Twist2!0.31!2.93!Twist2;;chr4:122673187..122673201,+!p2@Mycl1!0.31!2.54!Mycl1;;chr2:104966766..104966786,+!p1@Wt1!0.31!2.15!Wt1;;chr12:25336286..25336297,+!p2@Klf11!0.31!1.95!Klf11;;chr17:37139432..37139444,+!p4@Zfp57!0.31!1.76!Zfp57;;chr19:23215509..23215523,+!p4@Klf9!0.31!1.56!Klf9;;chr7:77511622..77511657,-!p5@Nr2f2!0.31!1.56!Nr2f2;;chr5:120121091..120121100,+!p7@Tbx3!0.31!1.37!Tbx3;;chr14:47896863..47896886,-!p5@Wdhd1!0.31!1.17!Wdhd1;;chr3:90097085..90097175,+!p1@Gatad2b!0.30!72.59!Gatad2b;;chr12:32635078..32635111,-!p1@Hbp1!0.30!38.05!Hbp1;;chr2:155299524..155299571,-!p1@Ncoa6!0.30!31.42!Ncoa6;;chr6:122769906..122769956,+!p1@Foxj2!0.30!29.27!Foxj2;;chr3:51144550..51144603,-!p2@Elf2!0.30!26.54!Elf2;;chr5:104183173..104183207,+!p1@Aff1!0.30!23.22!Aff1;;chr12:77471524..77471607,+!p1@Zbtb1!0.30!23.03!Zbtb1;;chr5:143942400..143942474,-!p1@Rbak!0.30!18.73!Rbak;;chr2:32218712..32218782,+!p2@Ciz1!0.30!17.95!Ciz1;;chr2:165213745..165213815,-!p1@Zfp334!0.30!15.61!Zfp334;;chr12:28027561..28027591,-!p1@Sox11!0.30!11.32!Sox11;;chr8:118230866..118230891,-!p4@Maf!0.30!11.12!Maf;;chr4:129055091..129055168,-!p1@Zbtb8a!0.30!9.95!Zbtb8a;;chr1:133904131..133904168,+!p4@Elk4!0.30!7.02!Elk4;;chr12:110031310..110031342,+!p4@Yy1!0.30!6.63!Yy1;;chr6:134780234..134780288,+!p1@Crebl2!0.30!5.07!Crebl2;;chr4:87678709..87678726,-!p4@Mllt3!0.30!4.88!Mllt3;;chr4:151401710..151401733,-!p2@Zbtb48!0.30!4.88!Zbtb48;;chr11:106134144..106134174,-!p3@Smarcd2!0.30!4.68!Smarcd2;;chr9:65675474..65675503,-!p3@Zfp609!0.30!4.68!Zfp609;;chr8:111227738..111227793,+!p@chr8:111227738..111227793,+!0.30!3.71!Zfhx3;;chr4:154010409..154010466,-!p2@Prdm16!0.30!3.51!Prdm16;;chr2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az;;chr3:30993974..30994045,+!p1@Skil!0.27!46.25!Skil;;chr6:90319480..90319651,+!p1@Zxdc!0.27!42.93!Zxdc;;chr11:106993428..106993480,-!p1@Bptf!0.27!42.93!Bptf;;chr6:47998498..47998527,-!p1@Zfp777!0.27!27.12!Zfp777;;chr6:48036529..48036657,-!p1@Zfp746!0.27!25.37!Zfp746;;chr3:52072329..52072346,+!p1@Foxo1!0.27!25.17!Foxo1;;chr15:102236700..102236764,+!p1@Sp1!0.27!24.98!Sp1;;chr6:47870583..47870635,+!p1@Zfp212!0.27!20.29!Zfp212;;chr11:59319701..59319741,-!p1@Zkscan17!0.27!19.12!Zkscan17;;chr17:84105551..84105600,+!p1@Mta3!0.27!18.34!Mta3;;chr7:4866804..4866832,+!p1@Zfp628!0.27!18.34!Zfp628;;chr18:82862265..82862325,-!p1@Zfp236!0.27!15.42!Zfp236;;chr15:75771454..75771521,+!p1@Zfp623!0.27!14.83!Zfp623;;chr7:71083876..71083932,-!p2@Klf13!0.27!12.88!Klf13;;chr3:135354384..135354443,-!p1@Nfkb1!0.27!9.76!Nfkb1;;chr15:40486566..40486600,+!p1@Zfpm2!0.27!9.37!Zfpm2;;chr11:72990738..72990763,+!p2@LOC100047518,p2@Tax1bp3!0.27!8.78!Tax1bp3;;chr7:5003165..5003203,+!p2@Zfp580!0.27!8.59!Zfp580;;chr4:3865501..3865548,-!p1@Plag1!0.27!8.00!Plag1;;chr10:92773818..92773906,-!p2@Elk3!0.27!7.42!Elk3;;chr11:50872733..50872809,+!p1@Zfp354a!0.27!7.02!Zfp354a;;chr8:72520139..72520157,-!p6@Gatad2a!0.27!5.85!Gatad2a;;chr4:62626594..62626651,+!p1@Zfp618!0.27!5.66!Zfp618;;chr7:105851808..105851822,+!p3@Prkrir!0.27!5.27!Prkrir;;chr5:107125838..107125858,-!p2@Zfp644!0.27!5.07!Zfp644;;chr15:100058660..100058711,+!p1@Gm1862,p2@Atf1!0.27!4.88!Atf1;;chr7:119822828..119822839,+!p4@Tead1!0.27!4.10!Tead1;;chr10:20880629..20880683,-!p1@Myb!0.27!4.10!Myb;;chr6:124959250..124959271,+!p6@Zfp384!0.27!3.90!Zfp384;;chr10:67000609..67000625,+!p1@Egr2!0.27!3.12!Egr2;;chr15:76709662..76709676,+!p2@Zfp7!0.27!2.73!Zfp7;;chr17:47874074..47874098,+!p3@Tfeb!0.27!2.34!Tfeb;;chr5:138187583..138187602,+!p6@Tsc22d4!0.27!2.34!Tsc22d4;;chr12:85534720..85534751,-!p4@C130039O16Rik!0.27!2.34!C130039O16Rik;;chr4:126700576..126700598,+!p7@Sfpq!0.27!2.34!Sfpq;;chr9:96653241..96653288,-!p1@E030011O05Rik,p5@Zbtb38!0.27!2.34!Zbtb38;;chr8:92872177..92872201,-!p2@Tox3!0.27!2.15!Tox3;;chr8:111227493..111227517,+!p@chr8:111227493..111227517,+!0.27!2.15!Zfhx3;;chr6:98978868..98978918,-!p6@Foxp1!0.27!2.15!Foxp1;;chr14:63864056..63864102,-!p1@Gata4!0.27!2.15!Gata4;;chr13:83663600..83663625,+!p6@Mef2c!0.27!1.76!Mef2c;;chr14:98568532..98568561,-!p4@Dach1!0.27!1.76!Dach1;;chr8:109868335..109868338,+!p3@Nfat5!0.27!1.76!Nfat5;;chr16:55822638..55822669,-!p3@Nfkbiz!0.27!1.76!Nfkbiz;;chr7:119822940..119822945,+!p6@Tead1!0.27!1.37!Tead1;;chr17:48025139..48025166,-!p8@Foxp4!0.27!1.17!Foxp4;;chr16:43510301..43510313,+!p24@Zbtb20!0.27!1.17!Zbtb20;;chr18:74375851..74375891,+!p1@Cxxc1!0.26!64.59!Cxxc1;;chr15:102301149..102301221,+!p2@Pcbp2!0.26!60.49!Pcbp2;;chr11:98798983..98799049,+!p1@Rara!0.26!40.78!Rara;;chr13:14156043..14156089,+!p1@Arid4b!0.26!40.00!Arid4b;;chr6:92041430..92041460,+!p1@Nr2c2!0.26!37.27!Nr2c2;;chr11:106134020..106134128,-!p1@Smarcd2!0.26!32.39!Smarcd2;;chr18:70728080..70728160,+!p2@Mbd2!0.26!31.61!Mbd2;;chr11:53583544..53583559,+!p1@Irf1!0.26!27.12!Irf1;;chr15:102034070..102034124,+!p1@Zfp740!0.26!27.12!Zfp740;;chr8:97855656..97855736,-!p1@Zfp319!0.26!26.54!Zfp319;;chr9:30838206..30838285,+!p2@Zbtb44!0.26!20.88!Zbtb44;;chr6:53523358..53523388,+!p1@Creb5!0.26!19.12!Creb5;;chr15:81575569..81575599,+!p2@Zc3h7b!0.26!17.56!Zc3h7b;;chr6:47827642..47827707,+!p1@Zfp282!0.26!17.17!Zfp282;;chr16:87699237..87699279,+!p1@Bach1!0.26!16.59!Bach1;;chr14:31832311..31832343,+!p1@Pbrm1!0.26!15.22!Pbrm1;;chr15:96117968..96118035,+!p1@Arid2!0.26!14.83!Arid2;;chr17:51952617..51952680,-!p3@Satb1!0.26!7.61!Satb1;;chr6:65728988..65729056,+!p1@Prdm5!0.26!7.42!Prdm5;;chr17:48061692..48061723,-!p5@Foxp4!0.26!7.22!Foxp4;;chr19:55816398..55816409,+!p5@Tcf7l2!0.26!7.02!Tcf7l2;;chr5:145962698..145962742,-!p1@Zkscan14!0.26!7.02!Zkscan14;;chr9:96620228..96620308,-!p3@Zbtb38!0.26!7.02!Zbtb38;;chr4:126698529..126698536,+!p2@Sfpq!0.26!6.83!Sfpq;;chrX:66613481..66613562,+!p1@Aff2!0.26!6.44!Aff2;;chr17:46693078..46693097,-!p3@Srf!0.26!6.05!Srf;;chr2:152223441..152223465,-!p2@Sox12!0.26!6.05!Sox12;;chr8:108160826..108160879,+!p3@Ctcf!0.26!4.10!Ctcf;;chr7:88138585..88138600,+!p2@Zfp592!0.26!3.90!Zfp592;;chr4:133276698..133276743,-!p6@Arid1a!0.26!3.90!Arid1a;;chr2:56976543..56976558,-!p2@Nr4a2!0.26!2.93!Nr4a2;;chr17:47874123..47874156,+!p2@Tfeb!0.26!2.93!Tfeb;;chr13:59924354..59924366,-!p3@Zcchc6!0.26!2.34!Zcchc6;;chr4:97444120..97444141,+!p13@Nfia!0.26!2.34!Nfia;;chr11:3189171..3189197,+!p4@Patz1!0.26!2.34!Patz1;;chr10:67375368..67375433,-!p1@Zfp365!0.26!2.15!Zfp365;;chr13:31650026..31650045,+!p2@Foxq1!0.26!1.95!Foxq1;;chr8:72356384..72356434,+!p2@Pbx4!0.26!1.76!Pbx4;;chr8:124984566..124984595,-!p1@Snai3!0.26!1.76!Snai3;;chr8:47825203..47825225,+!p3@Irf2!0.26!1.37!Irf2;;chr15:79178013..79178028,+!p3@Maff!0.26!1.37!Maff;;chr7:134169357..134169366,-!p18@Maz!0.26!1.17!Maz;;chr10:126725815..126725830,-!p10@Mbd6!0.26!1.17!Mbd6;;chr1:93698095..93698113,+!p3@Twist2!0.26!1.17!Twist2;;chr2:27532912..27532923,+!p9@Rxra!0.26!0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@@ Line 42: / Line 44: @@
 |is_a=EFO:0002091;;FF:0011394
 |is_obsolete=
-|library_ids=CNhs11224
+|library_id=CNhs11224
+|library_id_phase_based=2:CNhs11224
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;640
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;640
+|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/lung%252c%2520neonate%2520N00.CNhs11224.640-42C6.mm10.nobarcode.bam
+|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/lung%252c%2520neonate%2520N00.CNhs11224.640-42C6.mm10.nobarcode.ctss.bed.gz
+|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/lung%252c%2520neonate%2520N00.CNhs11224.640-42C6.mm9.nobarcode.bam
+|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/lung%252c%2520neonate%2520N00.CNhs11224.640-42C6.mm9.ctss.bed.gz
+|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/lung%252c%2520neonate%2520N00.CNhs11224.640-42C6.mm9.nobarcode.rdna.fa.gz
 |name=lung, neonate N00
 |namespace=FANTOM5
@@ Line 48: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11224,LSID748,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
 |repeat_enrich_byfamily=0.20266536337425,0.0135037167443681,0,0,0.0774164737207147,0,0.62477960721869,0,0.235009362875917,0,0,0.530783325033604,0,0,0,0,0,0,0.278125374869259,0,0,0,0,0,0.250550415371553,0,0.0345595052249084,0,0,0,0,0,0.552273038477589,0,0,0,0,0.0774164737207147,0.322717348894134,0.0774164737207147,0.165481043917198,0.824798806992361,-0.269868638010351,0,0,0,0,0,0,0,0,0,0,0.408421310342525,0,0.270614642890102,0.0774164737207147,0,0,0,-0.0428469550828748,0,0.0160769106755491,0,0,0.0774164737207147,0.0918531408485721,0.237952160365156,-0.158091042771083,0.163546403336998,0,0,0.117985380836023,0.111981861266907,0.0774164737207147,0,0.120324893493952,0.104274477097762,-0.155603706321664,0.216882423375885,0,0,0,0,0.0387082368603573,0.0774164737207147,-0.0968285571310035,-0.122894082331897,-0.105819557685266,0.0774164737207147,0,0,0,0.0097830538326066
@@ Line 85: / Line 97: @@
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 |xref=
-}} {{DRAAccessionNumbers
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:640-42C6;search_select_hide=table117:640-42C6
-|DRA_sample_Accession=CAGE@DRS008900
-|accession_numbers=DRX009037;DRR009911;DRZ001336;DRZ002719;CAGE
-|library_id=CNhs11224
 }}

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FF:640-42C6: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 19:18, 4 June 2020

CNhs11224

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0