FFCP PHASE1:Mm9::chr13:78339640..78339658,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:78339640..78339658,-
|short_description=p@chr13:78339640..78339658,-
|description=CAGE_peak_at_chr13:78339640..78339658,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2873 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:78339640..78339658,- | |||
|description=CAGE_peak_at_chr13:78339640..78339658,- | |||
|id=chr13:78339640..78339658,- | |||
|ontology_enrichment_celltype=CL:0000221!5.40e-21!44;CL:0000133!5.40e-21!44;CL:0002319!3.08e-20!43;CL:0000055!6.47e-16!50;CL:0000540!3.15e-14!33;CL:0000047!3.15e-14!33;CL:0000031!3.15e-14!33;CL:0000404!3.15e-14!33;CL:0000393!7.37e-11!39;CL:0000211!7.37e-11!39;CL:0000117!7.68e-10!23;CL:0000337!7.68e-10!23;CL:0000333!4.71e-07!10;CL:0000095!4.71e-07!10;CL:0000243!4.71e-07!10;CL:0000123!4.71e-07!10;CL:0000125!4.71e-07!10;CL:0000030!4.71e-07!10;CL:0000339!4.71e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,8.08e-22,44;CL:0000133,8.08e-22,44;CL:0002319,4.97e-21,43;CL:0000540,9.16e-15,33;CL:0000047,9.16e-15,33;CL:0000031,9.16e-15,33;CL:0000404,9.16e-15,33;CL:0000393,2.51e-11,39;CL:0000211,2.51e-11,39;CL:0000117,3.43e-10,23;CL:0000337,3.43e-10,23;CL:0000333,2.75e-07,10;CL:0000095,2.75e-07,10;CL:0000243,2.75e-07,10;CL:0000123,2.75e-07,10;CL:0000125,2.75e-07,10;CL:0000030,2.75e-07,10;CL:0000339,2.75e-07,10;CL:0002321,9.42e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.33e-27,75;UBERON:0001017,1.23e-25,73;UBERON:0004121,1.03e-24,95;UBERON:0000924,1.03e-24,95;UBERON:0006601,1.03e-24,95;UBERON:0002346,4.78e-19,64;UBERON:0003075,4.78e-19,64;UBERON:0007284,4.78e-19,64;UBERON:0010314,1.41e-16,92;UBERON:0010371,4.49e-16,73;UBERON:0000073,9.02e-16,54;UBERON:0001049,2.10e-15,52;UBERON:0005068,2.10e-15,52;UBERON:0006241,2.10e-15,52;UBERON:0007135,2.10e-15,52;UBERON:0003056,4.05e-14,49;UBERON:0000955,4.20e-13,47;UBERON:0006238,4.20e-13,47;UBERON:0002616,1.08e-12,46;UBERON:0002020,2.14e-11,34;UBERON:0002780,2.55e-11,39;UBERON:0001890,2.55e-11,39;UBERON:0006240,2.55e-11,39;UBERON:0003080,3.50e-11,40;UBERON:0003528,7.20e-09,29;UBERON:0002791,7.20e-09,29;UBERON:0001893,7.20e-09,29;UBERON:0000956,2.27e-07,21;UBERON:0001869,2.27e-07,21;UBERON:0000203,2.27e-07,21 | |||
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| ||
|short_description=p@chr13:78339640..78339658,- | |||
}} | }} |
Latest revision as of 08:35, 6 August 2015
Short description: | p@chr13:78339640..78339658, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:78339640..78339658, - |
Coexpression cluster: | MCL_coexpression_mm9:2873 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 8.08e-22 | 44 |
neurectodermal cell | 8.08e-22 | 44 |
neural cell | 4.97e-21 | 43 |
neuron | 9.16e-15 | 33 |
neuronal stem cell | 9.16e-15 | 33 |
neuroblast | 9.16e-15 | 33 |
electrically signaling cell | 9.16e-15 | 33 |
electrically responsive cell | 2.51e-11 | 39 |
electrically active cell | 2.51e-11 | 39 |
CNS neuron (sensu Vertebrata) | 3.43e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.43e-10 | 23 |
migratory neural crest cell | 2.75e-07 | 10 |
neuron associated cell | 2.75e-07 | 10 |
glial cell (sensu Vertebrata) | 2.75e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.75e-07 | 10 |
glial cell | 2.75e-07 | 10 |
glioblast | 2.75e-07 | 10 |
glioblast (sensu Vertebrata) | 2.75e-07 | 10 |
embryonic cell | 9.42e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.33e-27 | 75 |
central nervous system | 1.23e-25 | 73 |
ectoderm-derived structure | 1.03e-24 | 95 |
ectoderm | 1.03e-24 | 95 |
presumptive ectoderm | 1.03e-24 | 95 |
neurectoderm | 4.78e-19 | 64 |
neural plate | 4.78e-19 | 64 |
presumptive neural plate | 4.78e-19 | 64 |
structure with developmental contribution from neural crest | 1.41e-16 | 92 |
ecto-epithelium | 4.49e-16 | 73 |
regional part of nervous system | 9.02e-16 | 54 |
neural tube | 2.10e-15 | 52 |
neural rod | 2.10e-15 | 52 |
future spinal cord | 2.10e-15 | 52 |
neural keel | 2.10e-15 | 52 |
pre-chordal neural plate | 4.05e-14 | 49 |
brain | 4.20e-13 | 47 |
future brain | 4.20e-13 | 47 |
regional part of brain | 1.08e-12 | 46 |
gray matter | 2.14e-11 | 34 |
regional part of forebrain | 2.55e-11 | 39 |
forebrain | 2.55e-11 | 39 |
future forebrain | 2.55e-11 | 39 |
anterior neural tube | 3.50e-11 | 40 |
brain grey matter | 7.20e-09 | 29 |
regional part of telencephalon | 7.20e-09 | 29 |
telencephalon | 7.20e-09 | 29 |
cerebral cortex | 2.27e-07 | 21 |
cerebral hemisphere | 2.27e-07 | 21 |
pallium | 2.27e-07 | 21 |