FFCP PHASE1:Mm9::chr16:94592057..94592160,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:94592057..94592160,-
|short_description=p1@Pigp
|description=CAGE_peak_1_at_Pigp_5end
|association_with_transcript=0bp_to_ENSMUST00000138514,NM_001159618,...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56176 | |EntrezGene=56176 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=B8JK63,B8JK66,Q9JHG1 | |UniProt=B8JK63,B8JK66,Q9JHG1 | ||
|association_with_transcript=0bp_to_ENSMUST00000138514,NM_001159618,uc008aam.2_5end | |||
|cluster_id=chr16:94592057..94592160,- | |||
|description=CAGE_peak_1_at_Pigp_5end | |||
|id=chr16:94592057..94592160,- | |||
|ontology_enrichment_celltype=CL:0000221!1.82e-18!44;CL:0000133!1.82e-18!44;CL:0002319!6.96e-18!43;CL:0000540!6.18e-15!33;CL:0000047!6.18e-15!33;CL:0000031!6.18e-15!33;CL:0000404!6.18e-15!33;CL:0000055!9.58e-15!50;CL:0000393!1.78e-12!39;CL:0000211!1.78e-12!39;CL:0000117!2.51e-10!23;CL:0000337!2.51e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.82e-18,44;CL:0000133,1.82e-18,44;CL:0002319,6.96e-18,43;CL:0000540,6.18e-15,33;CL:0000047,6.18e-15,33;CL:0000031,6.18e-15,33;CL:0000404,6.18e-15,33;CL:0000393,1.78e-12,39;CL:0000211,1.78e-12,39;CL:0000117,2.51e-10,23;CL:0000337,2.51e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.76e-17!73;UBERON:0005743!2.76e-17!73;UBERON:0000073!4.99e-16!75;UBERON:0001016!4.99e-16!75;UBERON:0004121!7.55e-14!102;UBERON:0000924!7.55e-14!102;UBERON:0006601!7.55e-14!102;UBERON:0002346!6.42e-13!71;UBERON:0003075!6.42e-13!71;UBERON:0007284!6.42e-13!71;UBERON:0001049!1.75e-09!52;UBERON:0005068!1.75e-09!52;UBERON:0006241!1.75e-09!52;UBERON:0007135!1.75e-09!52;UBERON:0000033!3.16e-08!63;UBERON:0003056!1.06e-07!49;UBERON:0000955!3.33e-07!50;UBERON:0006238!3.33e-07!50;UBERON:0002616!3.76e-07!49;UBERON:0002780!4.83e-07!39;UBERON:0001890!4.83e-07!39;UBERON:0006240!4.83e-07!39;UBERON:0003080!9.17e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.76e-17,73;UBERON:0001016,4.99e-16,75;UBERON:0010314,5.00e-13,92;UBERON:0004121,1.21e-12,95;UBERON:0000924,1.21e-12,95;UBERON:0006601,1.21e-12,95;UBERON:0002346,7.35e-12,64;UBERON:0003075,7.35e-12,64;UBERON:0007284,7.35e-12,64;UBERON:0010371,1.63e-09,73;UBERON:0001049,1.75e-09,52;UBERON:0005068,1.75e-09,52;UBERON:0006241,1.75e-09,52;UBERON:0007135,1.75e-09,52;UBERON:0000073,1.82e-09,54;UBERON:0003056,1.05e-07,49;UBERON:0000955,1.92e-07,47;UBERON:0006238,1.92e-07,47;UBERON:0002616,2.14e-07,46;UBERON:0002780,4.83e-07,39;UBERON:0001890,4.83e-07,39;UBERON:0006240,4.83e-07,39;UBERON:0003080,9.17e-07,40 | |||
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| ||
|short_description=p1@Pigp | |||
}} | }} |
Latest revision as of 21:30, 25 September 2015
Short description: | p1@Pigp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pigp_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 0bp_to_ENSMUST00000138514, NM_001159618, uc008aam.2_5end |
EntrezGene: | Pigp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.82e-18 | 44 |
neurectodermal cell | 1.82e-18 | 44 |
neural cell | 6.96e-18 | 43 |
neuron | 6.18e-15 | 33 |
neuronal stem cell | 6.18e-15 | 33 |
neuroblast | 6.18e-15 | 33 |
electrically signaling cell | 6.18e-15 | 33 |
electrically responsive cell | 1.78e-12 | 39 |
electrically active cell | 1.78e-12 | 39 |
CNS neuron (sensu Vertebrata) | 2.51e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.51e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.76e-17 | 73 |
nervous system | 4.99e-16 | 75 |
structure with developmental contribution from neural crest | 5.00e-13 | 92 |
ectoderm-derived structure | 1.21e-12 | 95 |
ectoderm | 1.21e-12 | 95 |
presumptive ectoderm | 1.21e-12 | 95 |
neurectoderm | 7.35e-12 | 64 |
neural plate | 7.35e-12 | 64 |
presumptive neural plate | 7.35e-12 | 64 |
ecto-epithelium | 1.63e-09 | 73 |
neural tube | 1.75e-09 | 52 |
neural rod | 1.75e-09 | 52 |
future spinal cord | 1.75e-09 | 52 |
neural keel | 1.75e-09 | 52 |
regional part of nervous system | 1.82e-09 | 54 |
pre-chordal neural plate | 1.05e-07 | 49 |
brain | 1.92e-07 | 47 |
future brain | 1.92e-07 | 47 |
regional part of brain | 2.14e-07 | 46 |
regional part of forebrain | 4.83e-07 | 39 |
forebrain | 4.83e-07 | 39 |
future forebrain | 4.83e-07 | 39 |
anterior neural tube | 9.17e-07 | 40 |