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FFCP PHASE1:Mm9::chr1:136456734..136456757,+: Difference between revisions

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(Created page with "{{FFCP |id=chr1:136456734..136456757,+ |short_description=p3@Kdm5b |description=CAGE_peak_3_at_Kdm5b_5end |association_with_transcript=0bp_to_ENSMUST00000047714,ENSMUST000...")
 
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{{FFCP
{{FFCP
|id=chr1:136456734..136456757,+
|DHSsupport=NA
|short_description=p3@Kdm5b
|DPIdataset=NA
|description=CAGE_peak_3_at_Kdm5b_5end
|association_with_transcript=0bp_to_ENSMUST00000047714,ENSMUST00000163900,NM_152895,uc007csf.2,uc007csg.2,uc011wsg.1_5end
|EntrezGene=75605
|EntrezGene=75605
|HGNC=
|HGNC=
|MCL_coexpression_id=2153
|TSSclassifier=NA
|UniProt=Q80Y84,E9Q8E9,Q3TQL9
|UniProt=Q80Y84,E9Q8E9,Q3TQL9
|association_with_transcript=0bp_to_ENSMUST00000047714,ENSMUST00000163900,NM_152895,uc007csf.2,uc007csg.2,uc011wsg.1_5end
|cluster_id=chr1:136456734..136456757,+
|description=CAGE_peak_3_at_Kdm5b_5end
|id=chr1:136456734..136456757,+
|ontology_enrichment_celltype=CL:0000540!1.52e-10!33;CL:0000047!1.52e-10!33;CL:0000031!1.52e-10!33;CL:0000404!1.52e-10!33;CL:0000393!8.73e-09!39;CL:0000211!8.73e-09!39;CL:0000117!5.83e-08!23;CL:0000337!5.83e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000540,1.52e-10,33;CL:0000047,1.52e-10,33;CL:0000031,1.52e-10,33;CL:0000404,1.52e-10,33;CL:0000393,8.73e-09,39;CL:0000211,8.73e-09,39;CL:0000117,5.83e-08,23;CL:0000337,5.83e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.27e-11!102;UBERON:0000924!2.27e-11!102;UBERON:0006601!2.27e-11!102;UBERON:0001017!2.58e-11!73;UBERON:0005743!2.58e-11!73;UBERON:0000073!1.42e-10!75;UBERON:0001016!1.42e-10!75;UBERON:0003056!2.99e-10!49;UBERON:0002346!4.75e-10!71;UBERON:0003075!4.75e-10!71;UBERON:0007284!4.75e-10!71;UBERON:0000033!4.84e-10!63;UBERON:0002780!1.20e-09!39;UBERON:0001890!1.20e-09!39;UBERON:0006240!1.20e-09!39;UBERON:0000955!2.37e-09!50;UBERON:0006238!2.37e-09!50;UBERON:0003080!2.39e-09!40;UBERON:0002616!6.79e-09!49;UBERON:0000153!7.06e-09!94;UBERON:0001049!1.09e-08!52;UBERON:0005068!1.09e-08!52;UBERON:0006241!1.09e-08!52;UBERON:0007135!1.09e-08!52;UBERON:0007811!2.23e-08!86;UBERON:0002020!2.61e-08!34;UBERON:0002791!5.26e-08!29;UBERON:0003528!5.26e-08!29;UBERON:0001893!5.26e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.58e-11,73;UBERON:0004121,2.82e-11,95;UBERON:0000924,2.82e-11,95;UBERON:0006601,2.82e-11,95;UBERON:0010371,9.60e-11,73;UBERON:0001016,1.42e-10,75;UBERON:0003056,2.99e-10,49;UBERON:0002346,3.76e-10,64;UBERON:0003075,3.76e-10,64;UBERON:0007284,3.76e-10,64;UBERON:0002780,1.20e-09,39;UBERON:0001890,1.20e-09,39;UBERON:0006240,1.20e-09,39;UBERON:0000073,2.36e-09,54;UBERON:0003080,2.39e-09,40;UBERON:0000955,4.55e-09,47;UBERON:0006238,4.55e-09,47;UBERON:0001049,1.09e-08,52;UBERON:0005068,1.09e-08,52;UBERON:0006241,1.09e-08,52;UBERON:0007135,1.09e-08,52;UBERON:0002616,1.31e-08,46;UBERON:0002020,2.61e-08,34;UBERON:0003528,5.26e-08,29;UBERON:0002791,5.26e-08,29;UBERON:0001893,5.26e-08,29;UBERON:0010314,4.16e-07,92
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|phase1_expression=17.2960754873177,12.9120900826564,16.3799726180233,14.215817931421,13.023288978605,9.40123922706583,5.13947809310157,11.879345756625,5.490760163915,6.08567768437183,10.7867319982068,8.21653237651965,13.6960583944965,13.5501623749446,3.99731714178795,4.45445588257617,2.79824751251259,10.2525203741427,10.2835825204304,10.1853516431527,13.351796553718,3.87234709683453,3.13439746966722,9.11956809922418,8.25873411841812,8.03924749761028,9.04600191934057,7.75696437669201,4.75058548640935,10.3332353201572,7.53883736228036,8.89042942843484,6.1506478758457,0,2.02196133825892,1.49611180822643,3.06254034393554,17.5783284909501,13.2827008569046,10.470474879476,14.1175557127443,13.6609096991689,20.3914348273085,8.81277725829041,12.3679856087808,9.36088436024576,6.25913075478431,3.05235218932625,5.27246838562732,6.02732687130279,4.89952475688769,5.75010257459886,9.2280433331755,15.9579671242496,9.07453257684653,9.77585856936598,10.601737277734,8.76642556871652,27.9196715986245,32.797440714866,29.1562445612842,5.76035704517525,6.22506357277798,4.94944844504769,3.9554654502679,4.9733608046227,5.09320187881288,5.76327457982332,30.381056406384,27.1361936046698,29.6558195505449,9.42648248532552,8.61387309711293,29.397791811589,34.0251422114739,26.6573448116906,13.2139057199266,11.8749224419225,13.2101618600369,31.3889364797861,29.0015830219639,24.4829284161677,9.21303896704557,11.2552522006336,12.3766580699216,15.3206864446307,14.2371680799103,25.3503246322409,9.23859558664845,6.04572480854284,15.3628179011889,6.0229671388697,8.83962733820076,4.31762553310254,4.54843492213368,2.24013443548668,6.60088774619234,5.79463096765396,3.11743205523443,4.94675404314476,16.4786801138716,11.5493829672886,25.4805239706646,42.6640021891999,2.38140145112336,4.81383744402687,3.0331466700887,6.62266502370548,11.3932668804756,12.4691396814453,9.88866362566974,6.39377504455497,11.992005857315,10.0984169170257,16.8151851204058,13.6976584549346,12.6069433544531,8.24216334443496,3.5384422077995,10.676612096529,9.05450225687614,9.69750506270444,9.31958806090611,19.3235326027621,24.0863712835473,5.8755122697976,2.39630249011841,0.599902730993408,1.77898317902291,9.58660092190865,18.3000241127451,33.0470946056833,10.9509321721134,19.1786592997748,10.389402227978,19.7934340942664,16.9053343991525,8.21086006026614,7.58168275301024,7.57590681191306,11.4505989807179,10.8053989083732,11.5239763075424,13.7141384230501,17.4853802818913,15.5017601544668,19.2088535347444,13.9699820199068,14.2274875335676,9.8335161687266,12.6684809398043,10.0830036916684,13.9023624612799,8.70630416305416,17.9030458674911,11.5439874754726,0,1.80143534980301,1.13665399758237,8.28503090142008,7.97388603935727,9.00310307305074,11.1270025725049,9.24791889212798,8.79322543458056,7.20855228726264,7.51165523918934,13.8950757416932,9.87359099480883,10.342550236983,10.7821516695988,8.91819923294527,5.04965265169416,9.12603647570528,18.5055154736432,26.034866931959,13.2167513193519,6.34681359992506,7.89166526980366,12.3085436086032,9.14958975386863,7.26060688644033,7.11609740303585,6.84812254005213,8.0669940462567,8.23494773620054,11.0587491872119,10.1467800740987,7.79856348476481,9.88701349519644,5.18731319699266,9.55878111620963,6.44870863240478,10.7393601853145,7.88954149711563,12.0154283428735,13.1887691273986,13.8167565183928,11.1928670709935,7.82333784291891,7.69293766422737,7.40382983530803,3.85388415213294,5.6727335943472,4.12773889737726,2.47348323623339,5.68008339887808,5.788251834058,4.83789118384698,5.75392274901621,5.5125977103512,4.66754402419738,17.2521847832825,8.55924179637558,6.86482880852033,5.55673531483646,6.81710171383266,7.71909634181387,12.9327233116623,14.7803301180978,12.711268162478,8.65699937453459,11.7345124144251,13.0654880804616,15.7108802984769,17.1717610114863,14.3447981136634,16.1669223443606,20.5696651568158,9.99566219766002,14.5055384767352,13.4523624480806,7.53956419696361,6.52686820582452,5.4094070032094,9.65778612066564,10.1146871692309,11.1351102262593,5.73772308818364,13.8859009962405,16.0909191902291,9.37052986311932,15.9413314322271,11.4705023017225,20.0518806674155,22.6461224631066,12.5491317519217,17.2430956167674,20.1596766752727,20.2432429345738,10.5035663054119,16.2039699337202,24.4330439030364,13.5275500837479,10.619611067197,8.98288353773431,9.06970670894253,6.60117779145643,12.4026795009925,9.83792473420568,14.4719844174204,10.1789444253702,9.62542921638748,7.58488219045958,5.27093042874994,11.3449097573006,12.9367050186439,10.443543453816,10.9954881215341,12.8602221018955,15.7832807941623,16.9450376721967,16.4549020602121,19.1812917942198,10.560226862867,15.2519091021951,5.07215315526412,14.0153315000258,18.4069446433332,10.9769523369244,12.4147237763262,10.833299383174,9.91034844541493,8.34413859047294,5.46786818553129,13.2087595496462,6.66700298530962,5.08594833912666,4.92099219795691,4.34678529092393,4.24946074984638,3.21888340344413,4.28419918793714,6.68269432610579,11.704431762502,11.1825706919767,8.7484326065659,9.19988502463662,8.51613998610093,7.68726774393478,12.3153649030751,7.59092231753686,8.16574331738295,5.59205381778233,20.856638731315,15.1011711504419,18.8622679121091,16.3338998209,15.2408591703723,14.6991829176977,17.8383002741546,15.4943217964301,16.672635763688,22.4673232368186,21.8902804755978,14.220500428268,8.5144590421869,7.29247795870273,5.84643703400078,5.90788095702689,8.34461690081313,6.97133607215819,10.485956429395,10.5005107946074,9.37343721856498,10.3850970690946,12.8644402576473,15.6825301873737,17.0640277185091,6.80191150845634,11.0992976687032,7.26682238536753,8.562115434568,7.92077335531981,9.3841237725591,9.52388446189778,11.5758924702696,5.517293144389,10.1655331671072,12.4287813856938,16.6139698897425,11.3423100346834,13.7016503954128,20.3956352295219,13.5004500046361,13.9599572999508,17.672553950384,17.6038505995619,10.6900968011702,13.5668456956351,8.87814749921498,8.75184181445858,11.738337107167,10.2952364732008,11.1123363900808,12.5681384915725,10.9112531261217,11.3713745293709,9.63221339582911,13.3924702384114,13.8589431055426,11.0763513660424,12.7506741081461,11.9073422820768,13.4425818096032,15.8185560780238,11.9504911232959,14.2782952530365,8.57173130963539,14.5530161050657,13.35242663705,11.482366913954,11.1990162694243,12.0998889285097,12.4391021553485,13.9426947062057,13.4446072707403,12.3451299764702,11.3889617399207,13.98763649733,13.5046244245997,11.9301367713194,12.7318363247553,19.2354145012218,12.3983752476066,13.3220053509945,12.6250299165437,14.117850823649,10.8977882741598
|short_description=p3@Kdm5b
}}
}}

Latest revision as of 10:15, 26 September 2015

Short description:p3@Kdm5b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Kdm5b_5end
Coexpression cluster:MCL_coexpression_mm9:2153
Association with transcript: 0bp_to_ENSMUST00000047714, ENSMUST00000163900, NM_152895, uc007csf.2, uc007csg.2, uc011wsg.1_5end
EntrezGene:Kdm5b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Kdm5b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.30
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I616.38
CD326+ enterocyte, pool1.CNhs13542.11848-124I314.22
CD326+ enterocyte, pool2.CNhs13197.11849-124I413.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.40
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E610.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.22
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.70
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.55
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.25
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.28
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.19
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.26
GP2+ M cell, pool1.CNhs13228.11845-124H98.04
GP2+ M cell, pool2.CNhs13231.11846-124I19.05
GP2+ M cell, pool3.CNhs13240.11847-124I27.76
Ileum epithelium, pool1.CNhs13199.10252-104B94.75
Ileum epithelium, pool2.CNhs13232.10253-104C110.33
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G817.58
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H113.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H213.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H420.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.37
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.36
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.90
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.23
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.96
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.78
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.77
Mouse Granule cells, donor1.CNhs12131.11713-123C327.92
Mouse Granule cells, donor2.CNhs12357.11731-123E332.80
Mouse Granule cells, donor3.CNhs12108.11636-122C729.16
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D530.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F527.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D929.66
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D229.40
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F234.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D626.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.21
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D431.39
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F429.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D824.48
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.21
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.32
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.35
Mouse Schwann, donor1.CNhs12507.11728-123D99.24
Mouse Schwann, donor2.CNhs12573.11746-123F96.05
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.36
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.62
accessory axillary lymph node, adult.CNhs10475.1063-29H911.39
adrenal gland, adult.CNhs10508.49-24D712.47
adrenal gland, embryo E14.CNhs11038.406-44C59.89
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I111.99
adrenal gland, embryo E18.CNhs11026.1262-18F510.10
adrenal gland, neonate N00.CNhs11191.1311-23C116.82
adrenal gland, neonate N25.CNhs11223.1377-27I313.70
amnion, adult pregnant day17.5.CNhs10488.583-22A812.61
aorta, adult.CNhs10498.46-23H18.24
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F510.68
bone (os femoris), neonate N16.CNhs11225.1525-43A69.05
bone (os femoris), neonate N20.CNhs11195.1350-25C39.70
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B219.32
cerebellum, neonate N30.CNhs11135.1395-42I224.09
colon, adult.CNhs10468.36-18H75.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A49.59
corpus striatum, adult.CNhs10487.19-21D818.30
corpus striatum, neonate N00.CNhs11226.630-43F133.05
cortex, adult.CNhs10473.12-14D510.95
cortex, neonate N30.CNhs11107.1392-42F219.18
diencephalon, adult.CNhs10482.20-12F210.39
diencephalon, neonate N30.CNhs11201.1388-42B219.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B116.91
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.21
epididymis, adult.CNhs10490.58-23B27.58
eyeball, adult.CNhs10484.31-12G47.58
eyeball, embryo E12.CNhs11016.345-16C611.45
eyeball, embryo E14.CNhs10521.399-16E210.81
eyeball, embryo E15.CNhs10593.426-16C911.52
eyeball, embryo E17.CNhs11023.1261-18D413.71
eyeball, neonate N00.CNhs11207.633-15C617.49
eyeball, neonate N01.CNhs11140.1532-43E715.50
eyeball, neonate N02.CNhs11205.1551-44G819.21
eyeball, neonate N16.CNhs11188.777-19A213.97
forelimb, embryo E11.CNhs10596.335-25E214.23
forelimb, embryo E12.CNhs10600.359-14H29.83
forelimb, embryo E13.CNhs10589.384-1E212.67
forelimb, embryo E14.CNhs10577.413-26A810.08
forelimb, embryo E15.CNhs11007.437-20E713.90
forelimb, embryo E17.CNhs10598.1517-43C48.71
forelimb, embryo E18.CNhs11008.1520-43B517.90
gonad, embryo E13.CNhs11044.1564-45I611.54
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E98.29
heart, embryo E12.CNhs11015.353-12F57.97
heart, embryo E13.CNhs11013.376-3I99.00
heart, embryo E14.CNhs10597.403-26D411.13
heart, embryo E15.CNhs11017.431-16C89.25
heart, embryo E16.CNhs11021.457-17C68.79
heart, embryo E17.CNhs11025.479-18E57.21
heart, embryo E18.CNhs11030.1283-20G37.51
heart, neonate N00.CNhs11213.639-21E313.90
heart, neonate N03.CNhs11221.1349-25I29.87
heart, neonate N10.CNhs11118.749-24G110.34
heart, neonate N16.CNhs11209.782-15G110.78
heart, neonate N20.CNhs11127.821-26I68.92
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D29.13
hippocampus, adult.CNhs10478.13-16E818.51
hippocampus, neonate N00.CNhs11228.627-43G126.03
intestinal mucosa, adult.CNhs10506.860-29I313.22
intestine, adult.CNhs10496.178-9A36.35
intestine, embryo E12.CNhs11019.1251-16I57.89
intestine, embryo E13.CNhs11010.381-16D512.31
intestine, embryo E15.CNhs10602.976-16D89.15
intestine, embryo E16.CNhs10585.463-22H47.26
intestine, embryo E17.CNhs10582.482-18D37.12
intestine, embryo E18.CNhs10526.1289-20F76.85
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E98.23
intestine, neonate N06.CNhs11102.688-20B811.06
intestine, neonate N07.CNhs11095.720-20F210.15
intestine, neonate N10.CNhs11098.755-23A57.80
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G19.56
kidney, embryo E14.CNhs10606.411-4I96.45
kidney, embryo E15.CNhs10997.434-16F810.74
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I212.02
kidney, embryo E18.CNhs11001.1288-20C713.19
kidney, neonate N00.CNhs11214.646-21G713.82
kidney, neonate N10.CNhs11206.758-6D511.19
kidney, neonate N20.CNhs11113.832-19I17.82
kidney, neonate N25.CNhs11122.1353-25F37.69
kidney, neonate N30.CNhs11203.1385-42H17.40
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F85.67
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D75.68
liver, embryo E16.CNhs10523.462-17F55.79
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G45.75
liver, neonate N00.CNhs11117.641-24F45.51
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H28.56
liver, neonate N10.CNhs11115.751-24B96.86
liver, neonate N20.CNhs11220.823-25A35.56
liver, neonate N25.CNhs11198.1368-26H16.82
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B112.93
lung, embryo E12.CNhs10522.354-16G214.78
lung, embryo E14.CNhs10604.404-26F812.71
lung, embryo E15.CNhs11020.432-17C58.66
lung, embryo E16.CNhs10998.458-17B611.73
lung, embryo E17.CNhs10605.480-44A613.07
lung, embryo E18.CNhs10583.1287-20I615.71
lung, neonate N00.CNhs11224.640-42C617.17
lung, neonate N06.CNhs11212.683-20E514.34
lung, neonate N07.CNhs11111.715-19A316.17
lung, neonate N10.CNhs11219.750-23E620.57
lung, neonate N20.CNhs11109.822-18A410.00
lung, neonate N25.CNhs11119.1359-25C714.51
lung, neonate N30.CNhs11133.1394-42H213.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H29.66
medulla oblongata, adult.CNhs10477.17-12C210.11
medulla oblongata, neonate N30.CNhs11200.1396-42A311.14
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.74
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.89
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.09
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.37
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.47
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.05
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D922.65
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.55
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D517.24
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.16
olfactory brain, adult.CNhs10489.18-22I920.24
ovary, adult.CNhs10507.91-2I710.50
ovary, embryo E18.CNhs11040.505-44H716.20
ovary, neonate N00.CNhs11217.1299-22I424.43
oviduct, adult pregnant day01.CNhs10500.988-6G613.53
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F48.98
pancreas, embryo E15.CNhs11042.1556-45F29.07
pancreas, embryo E16.CNhs11003.460-26E56.60
pancreas, embryo E17.CNhs10599.1558-45G312.40
pancreas, embryo E18.CNhs10580.1535-43I79.84
pancreas, neonate N00.CNhs11105.645-26G914.47
pancreas, neonate N01.CNhs11138.1531-43D710.18
pancreas, neonate N02.CNhs11139.1539-43D89.63
pancreas, neonate N16.CNhs11136.787-43B67.58
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G812.94
pituitary gland, embryo E12.CNhs11018.346-16E610.44
pituitary gland, embryo E13.CNhs11009.370-44C711.00
pituitary gland, embryo E14.CNhs11037.398-44A512.86
pituitary gland, embryo E15.CNhs10592.427-16B915.78
pituitary gland, embryo E16.CNhs11036.449-43F616.95
pituitary gland, embryo E17.CNhs11039.1265-44F516.45
pituitary gland, neonate N00.CNhs11190.1308-22E919.18
placenta, adult pregnant day10.CNhs10472.539-13I710.56
placenta, adult pregnant day17.CNhs10464.577-18G315.25
prostate, adult.CNhs10470.859-1F85.07
skin, adult.CNhs10492.30-1C314.02
skin, neonate N00.CNhs11124.650-25G418.41
skin, neonate N03.CNhs11215.662-22H310.98
skin, neonate N06.CNhs11097.693-20I512.41
skin, neonate N10.CNhs11108.762-6C410.83
small intestine, neonate N16.CNhs11114.790-21I19.91
spinal cord, adult.CNhs10505.24-13C98.34
spleen, adult.CNhs10465.25-2G25.47
spleen, embryo E16.CNhs11035.461-43C113.21
spleen, embryo E18.CNhs11011.1271-21F26.67
spleen, neonate N10.CNhs11116.752-24D15.09
spleen, neonate N20.CNhs11112.824-19H14.92
spleen, neonate N25.CNhs11099.1354-25G34.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.28
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E311.70
stomach, embryo E15.CNhs10603.1252-16G811.18
stomach, embryo E16.CNhs11022.459-17D48.75
stomach, embryo E17.CNhs11006.1035-18D59.20
stomach, embryo E18.CNhs10999.1286-20C68.52
stomach, neonate N03.CNhs11193.1340-24B87.69
stomach, neonate N07.CNhs11210.718-18A912.32
stomach, neonate N25.CNhs11104.1355-25E47.59
stomach, neonate N30.CNhs11134.1386-42I18.17
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G520.86
testis, embryo E13.CNhs11031.389-23F515.10
testis, embryo E15.CNhs11034.443-27C518.86
testis, embryo E16.CNhs11033.470-26G516.33
testis, embryo E17.CNhs11029.486-18I515.24
testis, embryo E18.CNhs11027.503-18G514.70
testis, neonate N00.CNhs11189.1300-22B717.84
testis, neonate N07.CNhs11222.726-26I415.49
testis, neonate N10.CNhs11204.763-44D916.67
testis, neonate N20.CNhs11110.839-18H322.47
testis, neonate N30.CNhs11130.1391-42E221.89
thymus, adult.CNhs10471.38-12B514.22
thymus, embryo E14.CNhs11041.402-44I48.51
thymus, embryo E15.CNhs11005.430-45I27.29
thymus, embryo E16.CNhs11002.456-26C55.85
thymus, embryo E17.CNhs10581.478-18C15.91
thymus, embryo E18.CNhs10595.1273-19G48.34
thymus, neonate N02.CNhs11181.1541-43F86.97
thymus, neonate N03.CNhs11137.2104-43C710.49
thymus, neonate N06.CNhs11197.681-26C410.50
thymus, neonate N07.CNhs11211.713-19D39.37
thymus, neonate N10.CNhs11194.748-24E410.39
thymus, neonate N20.CNhs11186.820-7A212.86
thymus, neonate N25.CNhs11125.1362-25G715.68
thymus, neonate N30.CNhs11132.1393-42G217.06
tongue, adult.CNhs10499.32-1B46.80
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.56
urinary bladder, adult.CNhs10481.879-12E47.92
uterus, adult pregnant day19.CNhs10497.590-15F59.38
uterus, adult.CNhs10509.92-27E59.52
vagina, adult.CNhs10502.89-27D511.58
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.61
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.67
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.60
whole body, embryo E11.CNhs11014.324-5I810.69
whole body, embryo E12.CNhs10587.857-27C913.57
whole body, embryo E13.CNhs10512.372-23H28.88
whole body, embryo E14.5.CNhs10578.420-27D28.75
whole body, embryo E14.CNhs10519.395-14B111.74
whole body, embryo E16.CNhs10514.453-14F210.30
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.57
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.91
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.37
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.86
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.08
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.44
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.48
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.44
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.93
whole body, embryo E17.5.CNhs10513.490-9F912.73
whole body, embryo E17.CNhs10517.475-3I519.24
whole body, embryo E18.CNhs10516.493-3B312.40
whole body, neonate N00.CNhs10525.657-19C213.32
whole body, neonate N01.CNhs10576.659-23C612.63
whole body, neonate N06.CNhs10515.692-21D114.12
whole body, neonate N10.CNhs10518.761-6B410.90





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.52e-1033
neuronal stem cell1.52e-1033
neuroblast1.52e-1033
electrically signaling cell1.52e-1033
electrically responsive cell8.73e-0939
electrically active cell8.73e-0939
CNS neuron (sensu Vertebrata)5.83e-0823
neuroblast (sensu Vertebrata)5.83e-0823

Uber anatomy
Ontology termp-valuen
central nervous system2.58e-1173
ectoderm-derived structure2.82e-1195
ectoderm2.82e-1195
presumptive ectoderm2.82e-1195
ecto-epithelium9.60e-1173
nervous system1.42e-1075
pre-chordal neural plate2.99e-1049
neurectoderm3.76e-1064
neural plate3.76e-1064
presumptive neural plate3.76e-1064
regional part of forebrain1.20e-0939
forebrain1.20e-0939
future forebrain1.20e-0939
regional part of nervous system2.36e-0954
anterior neural tube2.39e-0940
brain4.55e-0947
future brain4.55e-0947
neural tube1.09e-0852
neural rod1.09e-0852
future spinal cord1.09e-0852
neural keel1.09e-0852
regional part of brain1.31e-0846
gray matter2.61e-0834
brain grey matter5.26e-0829
regional part of telencephalon5.26e-0829
telencephalon5.26e-0829
structure with developmental contribution from neural crest4.16e-0792
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