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FFCP PHASE1:Mm9::chr1:173275815..173275839,+: Difference between revisions

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(Created page with "{{FFCP |id=chr1:173275815..173275839,+ |short_description=p1@Pfdn2 |description=CAGE_peak_1_at_Pfdn2_5end |association_with_transcript=0bp_to_NM_011070,uc007doc.1_5end |E...")
 
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{{FFCP
{{FFCP
|id=chr1:173275815..173275839,+
|DHSsupport=NA
|short_description=p1@Pfdn2
|DPIdataset=NA
|description=CAGE_peak_1_at_Pfdn2_5end
|association_with_transcript=0bp_to_NM_011070,uc007doc.1_5end
|EntrezGene=18637
|EntrezGene=18637
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=O70591
|UniProt=O70591
|association_with_transcript=0bp_to_NM_011070,uc007doc.1_5end
|cluster_id=chr1:173275815..173275839,+
|description=CAGE_peak_1_at_Pfdn2_5end
|id=chr1:173275815..173275839,+
|ontology_enrichment_celltype=CL:0000117!1.15e-14!23;CL:0000337!1.15e-14!23;CL:0000540!1.25e-10!33;CL:0000047!1.25e-10!33;CL:0000031!1.25e-10!33;CL:0000404!1.25e-10!33;CL:0000221!1.95e-10!44;CL:0000133!1.95e-10!44;CL:0002319!3.95e-10!43;CL:0000393!2.37e-07!39;CL:0000211!2.37e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-14,23;CL:0000337,1.15e-14,23;CL:0000540,1.25e-10,33;CL:0000047,1.25e-10,33;CL:0000031,1.25e-10,33;CL:0000404,1.25e-10,33;CL:0000221,1.95e-10,44;CL:0000133,1.95e-10,44;CL:0002319,3.95e-10,43;CL:0000393,2.37e-07,39;CL:0000211,2.37e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.66e-19,73;UBERON:0010314,9.45e-19,92;UBERON:0001016,3.88e-18,75;UBERON:0000073,4.98e-18,54;UBERON:0001049,1.28e-16,52;UBERON:0005068,1.28e-16,52;UBERON:0006241,1.28e-16,52;UBERON:0007135,1.28e-16,52;UBERON:0002346,4.15e-15,64;UBERON:0003075,4.15e-15,64;UBERON:0007284,4.15e-15,64;UBERON:0000955,5.59e-14,47;UBERON:0006238,5.59e-14,47;UBERON:0002616,1.66e-13,46;UBERON:0004121,1.70e-12,95;UBERON:0000924,1.70e-12,95;UBERON:0006601,1.70e-12,95;UBERON:0003080,6.09e-12,40;UBERON:0002020,1.54e-11,34;UBERON:0002780,2.15e-11,39;UBERON:0001890,2.15e-11,39;UBERON:0006240,2.15e-11,39;UBERON:0003056,2.19e-11,49;UBERON:0010371,4.46e-11,73;UBERON:0003528,3.52e-09,29;UBERON:0002791,3.52e-09,29;UBERON:0001893,3.52e-09,29
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672746683,25.0082944566024,43.2021363287205,36.590451802532,38.6501737830734,26.4334118914249,21.159284665686,37.6928556457003,23.9787700589817,19.8828580187816,23.675103424736,43.6588314448418,53.9394678890138,35.9734698436488,40.4270247485298,31.0879270903032,26.8748076498777,26.171081353634,30.7237879167333,46.3841511985932,42.3404109199062,20.5407228408316,38.5177909051312,38.619319893975,43.5234756975613,22.3783369584352,25.8285761215644,21.7553763631144,24.3687719838052,23.1213170381258,22.176180736605,20.9718465084628,19.68649190943,27.9014340756955,23.3753804363138,28.3412979519014,39.0695277938354,53.8283139656854,35.9273079019128,28.398870322732,25.3371341859096,27.4727436400898,21.4368379079066,16.0503073291316,29.9318476587045,26.6988637174163,30.9363577257274,20.9660882459299,39.0497036269266,40.0358765616541,37.8012600129811,41.4295506966283,29.4542565839733,47.1161883694156,78.0480853833009,36.7102883528949,37.7321268716637,27.2279523116489,41.9226325255965,37.5040757238029,25.1138802415825,26.1664522693396,27.2781328153043,27.7966932940177,27.3757643881459,22.257908283557,30.9953389725311,30.7960983067421,33.0828301184332,25.719859329286,30.9411150272764,35.6882057857854,36.263559270691,28.8509883463419,41.1443102862498,40.8194354166476,43.3953865704124,34.1564079085972,35.1969082753336,33.5919993329956,32.9270351170991,31.831435083979,34.4942449168489,20.7622640513363,29.1842144585468,28.9603178184157,38.4677180579508,31.6071156019371,27.9714585922655,26.7297318393602,22.4574344107592,17.4045553779122,26.9716548217069,26.4709702943419,31.3021578087569
|phase1_expression=38.115425610941,26.8711063882308,18.654968814971,22.0798874253986,14.5259761684441,41.130421618413,31.3040938398004,13.0414556675992,46.3194895878984,43.5360018958908,56.6731474826422,50.0969158490713,14.7232627740837,18.9702273249224,15.3230490435205,12.3509913107794,12.5921138063066,10.2525203741427,14.5341299622083,17.8243653755173,35.4630519929961,26.2128111170337,24.5527801790599,23.8388709962176,22.2527002635155,30.4342940980961,31.4456257196125,27.5803177837938,19.3823887845501,30.7476758307116,28.6032358745343,34.9266870402797,38.1340168302433,31.6963362030877,25.7077941578634,28.4261243563022,25.3170001765338,11.3003540298965,16.4080422349998,20.9409497589519,12.9410927366823,12.9778642142105,24.7610280045888,20.0175940581168,24.431840423903,27.1649193199289,23.4717403304412,44.2591067452306,36.2482201511879,43.1634375944909,29.3971485413261,33.0630898039435,43.9590427871269,31.1905721064878,27.559691529682,21.6097926270195,22.9226751951005,27.3306208907044,69.7991789965612,75.1167190566287,59.5801519295808,36.9340539955354,25.789549087223,49.0445345918362,45.4878526780808,57.5488893106341,40.4460149199846,50.3325979971236,53.6075295634829,64.9378563375432,58.0496893329814,59.1297537715873,55.8797408607582,56.7132400365237,83.7689416699386,60.6684399162614,146.454121729187,132.156394918169,150.07358299135,67.1301204546687,89.108964868747,81.2624858068546,151.317185458748,169.391545619536,131.100896592503,55.0955454835759,53.3893802996636,57.4110293141926,30.2147511399404,25.0897579554528,10.1452571045587,9.46466264679525,27.19885334831,56.6688351219708,14.9448576012964,19.7131830322828,33.2853275712252,26.416699999599,46.5016948239135,36.393976174565,44.083990390101,39.7812079984385,68.7974147207943,63.9960032837998,26.4119070033681,30.6565437224869,29.8259422558722,38.3657835856041,11.6522047641227,37.7043033224655,45.2796702859615,48.1055455733183,43.5863289813951,51.8485883501022,35.7469669692543,36.4433114856059,17.5508427091405,15.7613299042704,26.5383165584962,30.2504009401655,25.6176161414057,22.3042616442202,13.0474232852686,41.2820923786281,52.5711234101772,13.7946809812639,19.7694955434768,46.1925102864924,25.1599049604668,68.7539034868136,68.1675898199753,48.5025799155657,66.4008903134496,79.5275072297328,83.5307939129432,69.9259843822035,33.1996326152031,24.2593592689681,36.3920772144492,24.411255282831,43.3301075065803,45.9804208866946,35.6523017014591,38.5804333659431,28.9835486384657,29.2099282249457,33.2641122187037,30.0095910057258,39.8800786925758,29.311442426012,28.8559843628876,24.9883134967435,38.6485676423581,17.0643561595862,24.0765099597294,48.1662925700753,39.3239384895411,31.3964446679953,20.1756084570871,39.7681483268164,41.2765865566729,51.3176875163892,27.9358787990548,43.8784236796711,46.7429352048756,46.739322894832,40.7775570127421,38.0655016116973,36.8614063806196,44.4893827654348,31.6168357228837,35.0879969820798,39.7385708676802,36.3699394840608,62.0355348264175,47.1303124697123,11.5646574044329,20.3626936330929,56.7346746423722,39.712470888135,27.3199018002838,23.7986559055544,22.4601824283319,19.7834651157062,16.6085171540579,22.2343588877415,25.3848560888272,19.6966907320739,22.4208700186988,22.4704852163555,25.7204279350886,19.7149860521824,32.433211062977,47.5273812456472,25.9227792048085,36.0462850286206,39.1784024078604,31.9117980500949,23.0813360503539,27.1602672282468,31.5567442961163,37.0191491765402,35.2778626233707,27.6962875488716,25.9457873549428,23.1607975756399,20.6917323816273,21.7059443777175,26.9903402888305,19.8510334841059,23.5096078823801,28.0052641451843,84.8232418511392,27.1662891798007,23.402825483592,26.5207821844467,26.0126249606773,27.4992807177119,25.1264338626582,46.2359044719983,29.4966607360067,38.8716246425181,43.4176959333729,26.1309761609233,22.3761022432853,22.2452358557891,22.5418256071853,19.2674279994434,20.4102103881583,30.4785765371273,25.9027472798843,29.7977060677914,25.6345182696763,14.6854534631052,16.7199852826472,16.0043312856745,88.3028244932856,96.4652180653832,52.4591825205361,56.8059586209839,27.1337068697981,25.3785183792815,33.6060500463166,29.1541933502113,29.6322236529584,27.7415000173056,24.2886421004937,31.855888512333,35.1806122372406,54.945945108129,21.4329528664486,38.4621703921271,24.7588178217436,22.4359367242648,22.5666735177937,44.6716370525166,35.9765032788054,32.0628635585027,38.3892460745005,22.7502009478506,29.7192537143454,28.7191646287229,26.0243086220847,25.9150141507369,20.0295356292498,21.6584640821192,32.3417625466099,48.9766175765164,51.7434735131018,36.8659700254339,35.4680467284547,40.1329839604659,40.808157109326,34.1000743008351,20.4164386015428,20.7595429446544,33.2997881062992,23.2489616647487,17.9225513632455,18.3954421030875,24.2325858326367,24.128712262524,15.1570035047522,80.1037304685402,20.6753765765402,27.862227175035,33.8905985086572,25.2413732386286,18.7271091977804,29.5123843436414,22.0971958992012,25.8910186798767,18.6569964635972,43.9148484286952,35.7459672746683,25.0082944566024,43.2021363287205,36.590451802532,38.6501737830734,26.4334118914249,21.159284665686,37.6928556457003,23.9787700589817,19.8828580187816,23.675103424736,43.6588314448418,53.9394678890138,35.9734698436488,40.4270247485298,31.0879270903032,26.8748076498777,26.171081353634,30.7237879167333,46.3841511985932,42.3404109199062,20.5407228408316,38.5177909051312,38.619319893975,43.5234756975613,22.3783369584352,25.8285761215644,21.7553763631144,24.3687719838052,23.1213170381258,22.176180736605,20.9718465084628,19.68649190943,27.9014340756955,23.3753804363138,28.3412979519014,39.0695277938354,53.8283139656854,35.9273079019128,28.398870322732,25.3371341859096,27.4727436400898,21.4368379079066,16.0503073291316,29.9318476587045,26.6988637174163,30.9363577257274,20.9660882459299,39.0497036269266,40.0358765616541,37.8012600129811,41.4295506966283,29.4542565839733,47.1161883694156,78.0480853833009,36.7102883528949,37.7321268716637,27.2279523116489,41.9226325255965,37.5040757238029,25.1138802415825,26.1664522693396,27.2781328153043,27.7966932940177,27.3757643881459,22.257908283557,30.9953389725311,30.7960983067421,33.0828301184332,25.719859329286,30.9411150272764,35.6882057857854,36.263559270691,28.8509883463419,41.1443102862498,40.8194354166476,43.3953865704124,34.1564079085972,35.1969082753336,33.5919993329956,32.9270351170991,31.831435083979,34.4942449168489,20.7622640513363,29.1842144585468,28.9603178184157,38.4677180579508,31.6071156019371,27.9714585922655,26.7297318393602,22.4574344107592,17.4045553779122,26.9716548217069,26.4709702943419,31.3021578087569
|short_description=p1@Pfdn2
}}
}}

Latest revision as of 18:55, 26 September 2015

Short description:p1@Pfdn2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pfdn2_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: 0bp_to_NM_011070, uc007doc.1_5end
EntrezGene:Pfdn2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pfdn2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G738.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I526.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I618.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I322.08
CD326+ enterocyte, pool2.CNhs13197.11849-124I414.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I741.13
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I831.30
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E746.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F243.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E656.67
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F150.10
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E414.72
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.97
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A115.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A312.35
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A512.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.25
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A414.53
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A617.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A335.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H226.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I924.55
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D123.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D222.25
GP2+ M cell, pool1.CNhs13228.11845-124H930.43
GP2+ M cell, pool2.CNhs13231.11846-124I131.45
GP2+ M cell, pool3.CNhs13240.11847-124I227.58
Ileum epithelium, pool1.CNhs13199.10252-104B919.38
Ileum epithelium, pool2.CNhs13232.10253-104C130.75
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C828.60
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I334.93
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G638.13
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F525.71
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F628.43
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F725.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G811.30
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H116.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H320.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H424.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D820.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D924.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B327.16
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B723.47
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C244.26
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B836.25
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C343.16
Mouse Astrocytes, donor2.CNhs12078.11552-120C429.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C433.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A243.96
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I931.19
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A127.56
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C121.61
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E122.92
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C527.33
Mouse Granule cells, donor1.CNhs12131.11713-123C369.80
Mouse Granule cells, donor2.CNhs12357.11731-123E375.12
Mouse Granule cells, donor3.CNhs12108.11636-122C759.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C636.93
Mouse Meningeal cells, donor3.CNhs12109.11639-122D125.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C749.04
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E745.49
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D257.55
Mouse Microglia, donor1.CNhs12629.11718-123C840.45
Mouse Microglia, donor2.CNhs12634.11736-123E850.33
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D553.61
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F564.94
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D958.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F159.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D555.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D256.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F283.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D660.67
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3146.45
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3132.16
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7150.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D467.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F489.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D881.26
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4151.32
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5169.39
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6131.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D655.10
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F653.39
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E157.41
Mouse Schwann, donor1.CNhs12507.11728-123D930.21
Mouse Schwann, donor2.CNhs12573.11746-123F925.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.15
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C427.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C856.67
Mouse hepatocyte, donor6.CNhs13090.11822-124F414.94
Mouse hepatocyte, donor8.CNhs13091.11824-124F619.71
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A733.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I726.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E346.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I836.39
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G644.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H139.78
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I868.80
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B664.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G126.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G230.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G329.83
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B638.37
accessory axillary lymph node, adult.CNhs10475.1063-29H911.65
adrenal gland, adult.CNhs10508.49-24D737.70
adrenal gland, embryo E14.CNhs11038.406-44C545.28
adrenal gland, embryo E16.CNhs11004.1254-43D648.11
adrenal gland, embryo E17.CNhs11043.1263-45I143.59
adrenal gland, embryo E18.CNhs11026.1262-18F551.85
adrenal gland, neonate N00.CNhs11191.1311-23C135.75
adrenal gland, neonate N25.CNhs11223.1377-27I336.44
amnion, adult pregnant day17.5.CNhs10488.583-22A817.55
aorta, adult.CNhs10498.46-23H115.76
bone (os femoris), adult.CNhs10483.56-12G226.54
bone (os femoris), neonate N02.CNhs11227.1985-43F530.25
bone (os femoris), neonate N16.CNhs11225.1525-43A625.62
bone (os femoris), neonate N20.CNhs11195.1350-25C322.30
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B241.28
cerebellum, neonate N30.CNhs11135.1395-42I252.57
colon, adult.CNhs10468.36-18H713.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C719.77
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D146.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D425.16
corpora quadrigemina, adult.CNhs10501.16-22A468.75
corpus striatum, adult.CNhs10487.19-21D868.17
corpus striatum, neonate N00.CNhs11226.630-43F148.50
cortex, adult.CNhs10473.12-14D566.40
cortex, neonate N30.CNhs11107.1392-42F279.53
diencephalon, adult.CNhs10482.20-12F283.53
diencephalon, neonate N30.CNhs11201.1388-42B269.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B133.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A224.26
epididymis, adult.CNhs10490.58-23B236.39
eyeball, adult.CNhs10484.31-12G424.41
eyeball, embryo E12.CNhs11016.345-16C643.33
eyeball, embryo E14.CNhs10521.399-16E245.98
eyeball, embryo E15.CNhs10593.426-16C935.65
eyeball, embryo E17.CNhs11023.1261-18D438.58
eyeball, neonate N00.CNhs11207.633-15C628.98
eyeball, neonate N01.CNhs11140.1532-43E729.21
eyeball, neonate N02.CNhs11205.1551-44G833.26
eyeball, neonate N16.CNhs11188.777-19A230.01
forelimb, embryo E11.CNhs10596.335-25E239.88
forelimb, embryo E12.CNhs10600.359-14H229.31
forelimb, embryo E13.CNhs10589.384-1E228.86
forelimb, embryo E14.CNhs10577.413-26A824.99
forelimb, embryo E15.CNhs11007.437-20E738.65
forelimb, embryo E17.CNhs10598.1517-43C417.06
forelimb, embryo E18.CNhs11008.1520-43B524.08
gonad, embryo E13.CNhs11044.1564-45I648.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C839.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D231.40
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D520.18
heart, embryo E11.CNhs10586.331-24E939.77
heart, embryo E12.CNhs11015.353-12F541.28
heart, embryo E13.CNhs11013.376-3I951.32
heart, embryo E14.CNhs10597.403-26D427.94
heart, embryo E15.CNhs11017.431-16C843.88
heart, embryo E16.CNhs11021.457-17C646.74
heart, embryo E17.CNhs11025.479-18E546.74
heart, embryo E18.CNhs11030.1283-20G340.78
heart, neonate N00.CNhs11213.639-21E338.07
heart, neonate N03.CNhs11221.1349-25I236.86
heart, neonate N10.CNhs11118.749-24G144.49
heart, neonate N16.CNhs11209.782-15G131.62
heart, neonate N20.CNhs11127.821-26I635.09
heart, neonate N25.CNhs11196.1351-25D339.74
heart, neonate N30.CNhs11202.1390-42D236.37
hippocampus, adult.CNhs10478.13-16E862.04
hippocampus, neonate N00.CNhs11228.627-43G147.13
intestinal mucosa, adult.CNhs10506.860-29I311.56
intestine, adult.CNhs10496.178-9A320.36
intestine, embryo E12.CNhs11019.1251-16I556.73
intestine, embryo E13.CNhs11010.381-16D539.71
intestine, embryo E15.CNhs10602.976-16D827.32
intestine, embryo E16.CNhs10585.463-22H423.80
intestine, embryo E17.CNhs10582.482-18D322.46
intestine, embryo E18.CNhs10526.1289-20F719.78
intestine, neonate N00.CNhs11126.644-26D116.61
intestine, neonate N01.CNhs11192.1322-23E922.23
intestine, neonate N06.CNhs11102.688-20B825.38
intestine, neonate N07.CNhs11095.720-20F219.70
intestine, neonate N10.CNhs11098.755-23A522.42
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E325.72
intestine, neonate N30.CNhs11131.1384-42G119.71
kidney, embryo E14.CNhs10606.411-4I932.43
kidney, embryo E15.CNhs10997.434-16F847.53
kidney, embryo E16.CNhs10584.464-22A525.92
kidney, embryo E17.CNhs11028.483-18I236.05
kidney, embryo E18.CNhs11001.1288-20C739.18
kidney, neonate N00.CNhs11214.646-21G731.91
kidney, neonate N10.CNhs11206.758-6D523.08
kidney, neonate N20.CNhs11113.832-19I127.16
kidney, neonate N25.CNhs11122.1353-25F331.56
kidney, neonate N30.CNhs11203.1385-42H137.02
liver, adult pregnant day01.CNhs10466.508-5B235.28
liver, embryo E12.CNhs10601.355-15F827.70
liver, embryo E13.CNhs10524.378-3H625.95
liver, embryo E14.CNhs10594.409-16E123.16
liver, embryo E15.CNhs10520.433-16D720.69
liver, embryo E16.CNhs10523.462-17F521.71
liver, embryo E17.CNhs10510.481-18A326.99
liver, embryo E18.CNhs10579.499-43G419.85
liver, neonate N00.CNhs11117.641-24F423.51
liver, neonate N03.CNhs11123.1345-25G228.01
liver, neonate N06.CNhs11101.684-20A884.82
liver, neonate N07.CNhs11103.716-20H227.17
liver, neonate N10.CNhs11115.751-24B923.40
liver, neonate N20.CNhs11220.823-25A326.52
liver, neonate N25.CNhs11198.1368-26H126.01
liver, neonate N30.CNhs11106.1382-42D127.50
lung, adult.CNhs10474.28-22B125.13
lung, embryo E12.CNhs10522.354-16G246.24
lung, embryo E14.CNhs10604.404-26F829.50
lung, embryo E15.CNhs11020.432-17C538.87
lung, embryo E16.CNhs10998.458-17B643.42
lung, embryo E17.CNhs10605.480-44A626.13
lung, embryo E18.CNhs10583.1287-20I622.38
lung, neonate N00.CNhs11224.640-42C622.25
lung, neonate N06.CNhs11212.683-20E522.54
lung, neonate N07.CNhs11111.715-19A319.27
lung, neonate N10.CNhs11219.750-23E620.41
lung, neonate N20.CNhs11109.822-18A430.48
lung, neonate N25.CNhs11119.1359-25C725.90
lung, neonate N30.CNhs11133.1394-42H229.80
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A125.63
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.69
mammary gland, adult lactating day02.CNhs10480.595-22B616.72
mammary gland, adult pregnant day19.CNhs10476.588-5H216.00
medulla oblongata, adult.CNhs10477.17-12C288.30
medulla oblongata, neonate N30.CNhs11200.1396-42A396.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C752.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C256.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E127.13
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E225.38
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E333.61
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D729.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D829.63
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D927.74
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D424.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D531.86
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D635.18
olfactory brain, adult.CNhs10489.18-22I954.95
ovary, adult.CNhs10507.91-2I721.43
ovary, embryo E18.CNhs11040.505-44H738.46
ovary, neonate N00.CNhs11217.1299-22I424.76
oviduct, adult pregnant day01.CNhs10500.988-6G622.44
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F444.67
pancreas, embryo E15.CNhs11042.1556-45F235.98
pancreas, embryo E16.CNhs11003.460-26E532.06
pancreas, embryo E17.CNhs10599.1558-45G338.39
pancreas, embryo E18.CNhs10580.1535-43I722.75
pancreas, neonate N00.CNhs11105.645-26G929.72
pancreas, neonate N01.CNhs11138.1531-43D728.72
pancreas, neonate N02.CNhs11139.1539-43D826.02
pancreas, neonate N16.CNhs11136.787-43B625.92
pancreas, neonate N25.CNhs11094.1555-45E220.03
pancreas, neonate N30.CNhs11182.1548-44H521.66
pituitary gland, adult.CNhs10493.21-1G832.34
pituitary gland, embryo E12.CNhs11018.346-16E648.98
pituitary gland, embryo E13.CNhs11009.370-44C751.74
pituitary gland, embryo E14.CNhs11037.398-44A536.87
pituitary gland, embryo E15.CNhs10592.427-16B935.47
pituitary gland, embryo E16.CNhs11036.449-43F640.13
pituitary gland, embryo E17.CNhs11039.1265-44F540.81
pituitary gland, neonate N00.CNhs11190.1308-22E934.10
placenta, adult pregnant day10.CNhs10472.539-13I720.42
placenta, adult pregnant day17.CNhs10464.577-18G320.76
prostate, adult.CNhs10470.859-1F833.30
skin, adult.CNhs10492.30-1C323.25
skin, neonate N00.CNhs11124.650-25G417.92
skin, neonate N03.CNhs11215.662-22H318.40
skin, neonate N06.CNhs11097.693-20I524.23
skin, neonate N10.CNhs11108.762-6C424.13
small intestine, neonate N16.CNhs11114.790-21I115.16
spinal cord, adult.CNhs10505.24-13C980.10
spleen, adult.CNhs10465.25-2G220.68
spleen, embryo E16.CNhs11035.461-43C127.86
spleen, embryo E18.CNhs11011.1271-21F233.89
spleen, neonate N10.CNhs11116.752-24D125.24
spleen, neonate N20.CNhs11112.824-19H118.73
spleen, neonate N25.CNhs11099.1354-25G329.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C622.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C925.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D318.66
stomach, adult.CNhs10503.33-1H643.91
stomach, embryo E12.CNhs10588.356-43E335.75
stomach, embryo E15.CNhs10603.1252-16G825.01
stomach, embryo E16.CNhs11022.459-17D443.20
stomach, embryo E17.CNhs11006.1035-18D536.59
stomach, embryo E18.CNhs10999.1286-20C638.65
stomach, neonate N03.CNhs11193.1340-24B826.43
stomach, neonate N07.CNhs11210.718-18A921.16
stomach, neonate N25.CNhs11104.1355-25E437.69
stomach, neonate N30.CNhs11134.1386-42I123.98
submandibular gland, adult.CNhs10469.59-29C119.88
testis, adult.CNhs10504.57-7G523.68
testis, embryo E13.CNhs11031.389-23F543.66
testis, embryo E15.CNhs11034.443-27C553.94
testis, embryo E16.CNhs11033.470-26G535.97
testis, embryo E17.CNhs11029.486-18I540.43
testis, embryo E18.CNhs11027.503-18G531.09
testis, neonate N00.CNhs11189.1300-22B726.87
testis, neonate N07.CNhs11222.726-26I426.17
testis, neonate N10.CNhs11204.763-44D930.72
testis, neonate N20.CNhs11110.839-18H346.38
testis, neonate N30.CNhs11130.1391-42E242.34
thymus, adult.CNhs10471.38-12B520.54
thymus, embryo E14.CNhs11041.402-44I438.52
thymus, embryo E15.CNhs11005.430-45I238.62
thymus, embryo E16.CNhs11002.456-26C543.52
thymus, embryo E17.CNhs10581.478-18C122.38
thymus, embryo E18.CNhs10595.1273-19G425.83
thymus, neonate N02.CNhs11181.1541-43F821.76
thymus, neonate N03.CNhs11137.2104-43C724.37
thymus, neonate N06.CNhs11197.681-26C423.12
thymus, neonate N07.CNhs11211.713-19D322.18
thymus, neonate N10.CNhs11194.748-24E420.97
thymus, neonate N20.CNhs11186.820-7A219.69
thymus, neonate N25.CNhs11125.1362-25G727.90
thymus, neonate N30.CNhs11132.1393-42G223.38
tongue, adult.CNhs10499.32-1B428.34
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H339.07
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F753.83
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G535.93
urinary bladder, adult.CNhs10481.879-12E428.40
uterus, adult pregnant day19.CNhs10497.590-15F525.34
uterus, adult.CNhs10509.92-27E527.47
vagina, adult.CNhs10502.89-27D521.44
vesicular gland, adult.CNhs10491.51-27F816.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.93
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A226.70
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A330.94
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A439.05
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A540.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A637.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A741.43
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A947.12
whole body, embryo E11.CNhs11014.324-5I878.05
whole body, embryo E12.CNhs10587.857-27C936.71
whole body, embryo E13.CNhs10512.372-23H237.73
whole body, embryo E14.5.CNhs10578.420-27D227.23
whole body, embryo E14.CNhs10519.395-14B141.92
whole body, embryo E16.CNhs10514.453-14F237.50
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G525.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G526.17
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G527.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G527.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G527.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G522.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G531.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G530.80
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G533.08
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G525.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G535.69
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G536.26
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G528.85
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G541.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G540.82
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G543.40
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G534.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G535.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G533.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G532.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G531.83
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G534.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.76
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G529.18
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G528.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G538.47
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G531.61
whole body, embryo E17.5.CNhs10513.490-9F927.97
whole body, embryo E17.CNhs10517.475-3I526.73
whole body, embryo E18.CNhs10516.493-3B322.46
whole body, neonate N00.CNhs10525.657-19C217.40
whole body, neonate N01.CNhs10576.659-23C626.97
whole body, neonate N06.CNhs10515.692-21D126.47
whole body, neonate N10.CNhs10518.761-6B431.30





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.15e-1423
neuroblast (sensu Vertebrata)1.15e-1423
neuron1.25e-1033
neuronal stem cell1.25e-1033
neuroblast1.25e-1033
electrically signaling cell1.25e-1033
ectodermal cell1.95e-1044
neurectodermal cell1.95e-1044
neural cell3.95e-1043
electrically responsive cell2.37e-0739
electrically active cell2.37e-0739

Uber anatomy
Ontology termp-valuen
central nervous system7.66e-1973
structure with developmental contribution from neural crest9.45e-1992
nervous system3.88e-1875
regional part of nervous system4.98e-1854
neural tube1.28e-1652
neural rod1.28e-1652
future spinal cord1.28e-1652
neural keel1.28e-1652
neurectoderm4.15e-1564
neural plate4.15e-1564
presumptive neural plate4.15e-1564
brain5.59e-1447
future brain5.59e-1447
regional part of brain1.66e-1346
ectoderm-derived structure1.70e-1295
ectoderm1.70e-1295
presumptive ectoderm1.70e-1295
anterior neural tube6.09e-1240
gray matter1.54e-1134
regional part of forebrain2.15e-1139
forebrain2.15e-1139
future forebrain2.15e-1139
pre-chordal neural plate2.19e-1149
ecto-epithelium4.46e-1173
brain grey matter3.52e-0929
regional part of telencephalon3.52e-0929
telencephalon3.52e-0929
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