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FFCP PHASE1:Mm9::chr2:11093936..11093954,+: Difference between revisions

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(Created page with "{{FFCP |id=chr2:11093936..11093954,+ |short_description=p4@Prkcq |description=CAGE_peak_4_at_Prkcq_5end |association_with_transcript=0bp_to_ENSMUST00000102970_5end |Entre...")
 
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{{FFCP
{{FFCP
|id=chr2:11093936..11093954,+
|DHSsupport=NA
|short_description=p4@Prkcq
|DPIdataset=NA
|description=CAGE_peak_4_at_Prkcq_5end
|association_with_transcript=0bp_to_ENSMUST00000102970_5end
|EntrezGene=18761
|EntrezGene=18761
|HGNC=
|HGNC=
|MCL_coexpression_id=40
|TSSclassifier=NA
|UniProt=Q8CAV6
|UniProt=Q8CAV6
|association_with_transcript=0bp_to_ENSMUST00000102970_5end
|cluster_id=chr2:11093936..11093954,+
|description=CAGE_peak_4_at_Prkcq_5end
|id=chr2:11093936..11093954,+
|ontology_enrichment_celltype=CL:0000791!6.71e-08!9;CL:0000789!6.71e-08!9;CL:0002420!6.71e-08!9;CL:0002419!6.71e-08!9;CL:0000790!6.71e-08!9;CL:0000624!3.49e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,5.25e-13,9;CL:0000789,5.25e-13,9;CL:0002420,5.25e-13,9;CL:0002419,5.25e-13,9;CL:0000790,5.25e-13,9;CL:0000624,1.02e-11,8;CL:0000084,3.98e-10,11;CL:0000827,3.98e-10,11;CL:0000893,4.11e-09,6;CL:0002489,4.11e-09,6;CL:0000898,4.11e-09,6;CL:0000809,4.11e-09,6;CL:0000810,4.11e-09,6;CL:0000895,4.11e-09,6;CL:0000808,4.11e-09,6;CL:0000894,4.11e-09,6;CL:0000806,4.11e-09,6;CL:0000807,4.11e-09,6;CL:0000805,4.11e-09,6;CL:0002425,4.11e-09,6;CL:0002436,4.11e-09,6;CL:0002427,4.11e-09,6;CL:0002428,4.11e-09,6;CL:0002429,4.11e-09,6;CL:0002433,4.11e-09,6;CL:0002431,4.11e-09,6;CL:0002432,4.11e-09,6;CL:0000838,4.71e-09,12;CL:0000542,3.78e-08,13;CL:0000051,3.78e-08,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!1.25e-11!29;UBERON:0006562!4.40e-10!24;UBERON:0001557!4.40e-10!24;UBERON:0001042!4.40e-10!24;UBERON:0008814!4.40e-10!24;UBERON:0009145!4.40e-10!24;UBERON:0003408!6.18e-10!24;UBERON:0005057!6.49e-10!51;UBERON:0002370!1.40e-09!23;UBERON:0000974!1.40e-09!23;UBERON:0004807!1.40e-09!23;UBERON:0005058!1.40e-09!23;UBERON:0003351!1.40e-09!23;UBERON:0009113!1.40e-09!23;UBERON:0003295!1.40e-09!23;UBERON:0009722!1.40e-09!23;UBERON:0005562!1.40e-09!23;UBERON:0007690!1.40e-09!23;UBERON:0000072!1.24e-07!27;UBERON:0002405!7.99e-07!70
|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.79e-19,29;UBERON:0005057,8.79e-19,29;UBERON:0006562,1.18e-17,24;UBERON:0001557,1.18e-17,24;UBERON:0001042,1.18e-17,24;UBERON:0008814,1.18e-17,24;UBERON:0009145,1.18e-17,24;UBERON:0003408,2.21e-17,24;UBERON:0002370,9.67e-17,23;UBERON:0000974,9.67e-17,23;UBERON:0004807,9.67e-17,23;UBERON:0005058,9.67e-17,23;UBERON:0003351,9.67e-17,23;UBERON:0009113,9.67e-17,23;UBERON:0003295,9.67e-17,23;UBERON:0009722,9.67e-17,23;UBERON:0005562,9.67e-17,23;UBERON:0007690,9.67e-17,23;UBERON:0000077,6.32e-16,35;UBERON:0007811,2.44e-15,36;UBERON:0000072,6.06e-15,27;UBERON:0001004,2.39e-13,42;UBERON:0002193,4.10e-13,48;UBERON:0002405,4.10e-13,48;UBERON:0002390,4.29e-13,45;UBERON:0003061,4.29e-13,45;UBERON:0000065,9.33e-13,41;UBERON:0000153,1.43e-11,43;UBERON:0001041,7.24e-08,80
|phase1_expression=0.80074423552397,0,0,0,0,0,0,26.21203465864,4.50523910885334,6.55380673701582,5.30775701499065,5.66382328866889,39.0337664243149,34.968160967599,0.666219523631325,0.809901069559304,0,2.99689057090326,4.9361196098066,1.69755860719212,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,34.8173828165445,22.8543783416875,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,1.14260393761521,1.98781686856452,0.367472397644862,0.0958454710182364,0,1.10115880999389,1.27687338085188,0.921639199537461,0.131886287730194,0.274462930807229,0,0.837548997004143,0,1.22238598221448,1.17851434189467,2.27794689278565,2.42319279572891,0.605809546665472,1.51143120213571,4.63783181922684,0.860423876981386,0,0,0,0,1.96622188184453,0,0,0,1.54927761754349,0,0,0,0,0,0,0.68510327831436,13.2058320660058,0.742210695324124,0,0,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0.323533699894818,1.54589062922275,1.93950101254089,0,0.585561594023094,0,0.510914110417183,0.11981512450592,0.599902730993408,0,0.748953197024114,0.915001205637253,0,0.695297280769106,1.27857728665165,1.24672826735736,0.811206315338788,0.305518091550949,0.746441823660558,0.252722758433675,0.631325567659422,1.04096354370163,0.919608417733892,1.26043490863744,0.753524089178575,0.748401490664606,0.896796041993948,0.562210347358373,1.29351685369508,0.431135985865684,0,0.351902248327898,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0.284163499395593,0,0,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0.486412857275134,0.292399974850665,0.658650345873152,0.402619256281115,0.841159794256509,0.205809224758569,0.660837565967596,0,0,0,0,0,0,0.570676878337677,1.89811624617805,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,1.01825663922657,0.387904974335251,0.631222379012867,1.70738650235495,2.65698266363284,1.8839847340965,0.987177311374404,0.889357881261447,1.50160595144485,0.982794975566015,0.449724224769707,1.01430060694251,0.72353147925725,0.763877555344259,0.863088412352432,0.810676133875177,0.274561413188081,0,0.744281895337007,0.624075346229121,0,0.717589654087649,0.482443521363367,1.66277871149944,0,0,0.509235257325564,0,0,0,0,0.788175720530955,0.664394068946325,1.11618338060241,1.14704320301017,1.55416483679306,1.73578870297814,0,0,0,0.551873492609465,1.28440471990234,1.40654023910644,0,1.76729649043061,1.57754109708128,1.56175497718655,0.430846795465598,0,0,0,0,1.16902343164525,0.395287777946524,0,0.141940085208269,0.178065603667255,0.162886959353576,0.494910368917606,1.32745138339963,0,0.302323556964751,0,0.295301892880773,0.614870295887855,0,0.363533729477506,0,0,0,0,2.38307724027652,0,0,0,0,0,0,0,0.23467170806371,0,0,0.49465875882444,0.645857706783622,0.603129249281559,0.596861720015682,1.80554989719567,0.874442509889552,2.22510362412612,3.2465467351592,0.206386867963223,0.925972636848558,2.0720530270516,1.50363650493128,2.51655990527175,0.509935289981566,0.839708713941948,1.38199973804424,0,0.158167996790568,0,0.216010681643603,0,0,0.134864346384821,0,0.785267825952089,0,1.24267862617385,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,2.52808896502543,1.82452693761148,1.84879722896689,1.03936658382236,1.07416017400489,0.993406773906324,2.76449533895928,2.06765338044408,2.52416124870369,1.82896335972,2.92395936896837,4.48306251402861,3.84847366561318,5.37633750035217,1.81384306892169,0,0,0,0.772758376128762,1.12609485270709,0.73260649706906,0,0,0,0.920650473014354,0,0.343706364687375,0,0.755393897389701,1.35004500046361,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.729320151204882,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,0.962757628775446,0.758091635291392,0,0.754505365544305,0.561849044819294,0.640251524048693,0.574354689556133,0,0.579421629724277,1.73618298417335,0.412085900803307,0.735994600671987,1.37147700954166,0.887379030796687,0.238436189947321,0.726732083161643,0.564656282491984,1.09998990259179,0.548783918618318,0.526139422875686,0.679020569229309,0.561142271657738,1.18635018124174,0.985044823755635,0.818462086339379,0.77468420592983,0.385813221962283,0.249810577937946,1.40358965067245,1.07435527024149,0.191288332068843,1.10295709559758,0.695603506861264
|phase1_expression=0.80074423552397,0,0,0,0,0,0,26.21203465864,4.50523910885334,6.55380673701582,5.30775701499065,5.66382328866889,39.0337664243149,34.968160967599,0.666219523631325,0.809901069559304,0,2.99689057090326,4.9361196098066,1.69755860719212,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,34.8173828165445,22.8543783416875,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,1.14260393761521,1.98781686856452,0.367472397644862,0.0958454710182364,0,1.10115880999389,1.27687338085188,0.921639199537461,0.131886287730194,0.274462930807229,0,0.837548997004143,0,1.22238598221448,1.17851434189467,2.27794689278565,2.42319279572891,0.605809546665472,1.51143120213571,4.63783181922684,0.860423876981386,0,0,0,0,1.96622188184453,0,0,0,1.54927761754349,0,0,0,0,0,0,0.68510327831436,13.2058320660058,0.742210695324124,0,0,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0.323533699894818,1.54589062922275,1.93950101254089,0,0.585561594023094,0,0.510914110417183,0.11981512450592,0.599902730993408,0,0.748953197024114,0.915001205637253,0,0.695297280769106,1.27857728665165,1.24672826735736,0.811206315338788,0.305518091550949,0.746441823660558,0.252722758433675,0.631325567659422,1.04096354370163,0.919608417733892,1.26043490863744,0.753524089178575,0.748401490664606,0.896796041993948,0.562210347358373,1.29351685369508,0.431135985865684,0,0.351902248327898,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0.284163499395593,0,0,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0.486412857275134,0.292399974850665,0.658650345873152,0.402619256281115,0.841159794256509,0.205809224758569,0.660837565967596,0,0,0,0,0,0,0.570676878337677,1.89811624617805,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,1.01825663922657,0.387904974335251,0.631222379012867,1.70738650235495,2.65698266363284,1.8839847340965,0.987177311374404,0.889357881261447,1.50160595144485,0.982794975566015,0.449724224769707,1.01430060694251,0.72353147925725,0.763877555344259,0.863088412352432,0.810676133875177,0.274561413188081,0,0.744281895337007,0.624075346229121,0,0.717589654087649,0.482443521363367,1.66277871149944,0,0,0.509235257325564,0,0,0,0,0.788175720530955,0.664394068946325,1.11618338060241,1.14704320301017,1.55416483679306,1.73578870297814,0,0,0,0.551873492609465,1.28440471990234,1.40654023910644,0,1.76729649043061,1.57754109708128,1.56175497718655,0.430846795465598,0,0,0,0,1.16902343164525,0.395287777946524,0,0.141940085208269,0.178065603667255,0.162886959353576,0.494910368917606,1.32745138339963,0,0.302323556964751,0,0.295301892880773,0.614870295887855,0,0.363533729477506,0,0,0,0,2.38307724027652,0,0,0,0,0,0,0,0.23467170806371,0,0,0.49465875882444,0.645857706783622,0.603129249281559,0.596861720015682,1.80554989719567,0.874442509889552,2.22510362412612,3.2465467351592,0.206386867963223,0.925972636848558,2.0720530270516,1.50363650493128,2.51655990527175,0.509935289981566,0.839708713941948,1.38199973804424,0,0.158167996790568,0,0.216010681643603,0,0,0.134864346384821,0,0.785267825952089,0,1.24267862617385,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,2.52808896502543,1.82452693761148,1.84879722896689,1.03936658382236,1.07416017400489,0.993406773906324,2.76449533895928,2.06765338044408,2.52416124870369,1.82896335972,2.92395936896837,4.48306251402861,3.84847366561318,5.37633750035217,1.81384306892169,0,0,0,0.772758376128762,1.12609485270709,0.73260649706906,0,0,0,0.920650473014354,0,0.343706364687375,0,0.755393897389701,1.35004500046361,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.729320151204882,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,0.962757628775446,0.758091635291392,0,0.754505365544305,0.561849044819294,0.640251524048693,0.574354689556133,0,0.579421629724277,1.73618298417335,0.412085900803307,0.735994600671987,1.37147700954166,0.887379030796687,0.238436189947321,0.726732083161643,0.564656282491984,1.09998990259179,0.548783918618318,0.526139422875686,0.679020569229309,0.561142271657738,1.18635018124174,0.985044823755635,0.818462086339379,0.77468420592983,0.385813221962283,0.249810577937946,1.40358965067245,1.07435527024149,0.191288332068843,1.10295709559758,0.695603506861264
|short_description=p4@Prkcq
}}
}}

Latest revision as of 23:02, 1 October 2015

Short description:p4@Prkcq
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Prkcq_5end
Coexpression cluster:MCL_coexpression_mm9:40
Association with transcript: 0bp_to_ENSMUST00000102970_5end
EntrezGene:Prkcq
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Prkcq

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.51
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.31
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.66
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E439.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E834.97
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.94
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I934.82
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A122.85
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H913.21
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D51.71
kidney, neonate N20.CNhs11113.832-19I12.66
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I21.85
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F82.76
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C42.52
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E42.92
thymus, neonate N20.CNhs11186.820-7A24.48
thymus, neonate N25.CNhs11125.1362-25G73.85
thymus, neonate N30.CNhs11132.1393-42G25.38
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell5.25e-139
alpha-beta T cell5.25e-139
immature T cell5.25e-139
mature T cell5.25e-139
immature alpha-beta T cell5.25e-139
CD4-positive, alpha-beta T cell1.02e-118
T cell3.98e-1011
pro-T cell3.98e-1011
thymocyte4.11e-096
double negative thymocyte4.11e-096
naive T cell4.11e-096
double-positive, alpha-beta thymocyte4.11e-096
CD4-positive, alpha-beta thymocyte4.11e-096
naive thymus-derived CD4-positive, alpha-beta T cell4.11e-096
DN4 thymocyte4.11e-096
DN1 thymic pro-T cell4.11e-096
DN2 thymocyte4.11e-096
DN3 thymocyte4.11e-096
immature single positive thymocyte4.11e-096
early T lineage precursor4.11e-096
mature CD4 single-positive thymocyte4.11e-096
resting double-positive thymocyte4.11e-096
double-positive blast4.11e-096
CD69-positive double-positive thymocyte4.11e-096
CD69-positive, CD4-positive single-positive thymocyte4.11e-096
CD4-positive, CD8-intermediate double-positive thymocyte4.11e-096
CD24-positive, CD4 single-positive thymocyte4.11e-096
lymphoid lineage restricted progenitor cell4.71e-0912
lymphocyte3.78e-0813
common lymphoid progenitor3.78e-0813

Uber anatomy
Ontology termp-valuen
hemopoietic organ8.79e-1929
immune organ8.79e-1929
pharynx1.18e-1724
upper respiratory tract1.18e-1724
chordate pharynx1.18e-1724
pharyngeal arch system1.18e-1724
pharyngeal region of foregut1.18e-1724
gland of gut2.21e-1724
thymus9.67e-1723
neck9.67e-1723
respiratory system epithelium9.67e-1723
hemolymphoid system gland9.67e-1723
pharyngeal epithelium9.67e-1723
thymic region9.67e-1723
pharyngeal gland9.67e-1723
entire pharyngeal arch endoderm9.67e-1723
thymus primordium9.67e-1723
early pharyngeal endoderm9.67e-1723
mixed endoderm/mesoderm-derived structure6.32e-1635
craniocervical region2.44e-1536
segment of respiratory tract6.06e-1527
respiratory system2.39e-1342
hemolymphoid system4.10e-1348
immune system4.10e-1348
hematopoietic system4.29e-1345
blood island4.29e-1345
respiratory tract9.33e-1341
anterior region of body1.43e-1143
foregut7.24e-0880
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