FFCP PHASE1:Mm9::chr4:122563323..122563339,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:122563323..122563339,-
|short_description=p7@Cap1
|description=CAGE_peak_7_at_Cap1_5end
|association_with_transcript=-24bp_to_ENSMUST00000106257_5end
|Ent...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12331 | |EntrezGene=12331 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=687 | |||
|TSSclassifier=NA | |||
|UniProt=P40124 | |UniProt=P40124 | ||
|association_with_transcript=-24bp_to_ENSMUST00000106257_5end | |||
|cluster_id=chr4:122563323..122563339,- | |||
|description=CAGE_peak_7_at_Cap1_5end | |||
|id=chr4:122563323..122563339,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.79e-13,9;CL:0000789,3.79e-13,9;CL:0002420,3.79e-13,9;CL:0002419,3.79e-13,9;CL:0000790,3.79e-13,9;CL:0000838,8.89e-12,12;CL:0000624,1.08e-11,8;CL:0000542,1.10e-10,13;CL:0000051,1.10e-10,13;CL:0000084,2.20e-10,11;CL:0000827,2.20e-10,11;CL:0000893,3.27e-09,6;CL:0002489,3.27e-09,6;CL:0000898,3.27e-09,6;CL:0000809,3.27e-09,6;CL:0000810,3.27e-09,6;CL:0000895,3.27e-09,6;CL:0000808,3.27e-09,6;CL:0000894,3.27e-09,6;CL:0000806,3.27e-09,6;CL:0000807,3.27e-09,6;CL:0000805,3.27e-09,6;CL:0002425,3.27e-09,6;CL:0002436,3.27e-09,6;CL:0002427,3.27e-09,6;CL:0002428,3.27e-09,6;CL:0002429,3.27e-09,6;CL:0002433,3.27e-09,6;CL:0002431,3.27e-09,6;CL:0002432,3.27e-09,6;CL:0002031,3.18e-08,25;CL:0000738,1.27e-07,17;CL:0002087,1.27e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.09e-09!23;UBERON:0000974!1.09e-09!23;UBERON:0004807!1.09e-09!23;UBERON:0005058!1.09e-09!23;UBERON:0003351!1.09e-09!23;UBERON:0009113!1.09e-09!23;UBERON:0003295!1.09e-09!23;UBERON:0009722!1.09e-09!23;UBERON:0005562!1.09e-09!23;UBERON:0007690!1.09e-09!23;UBERON:0006562!3.68e-09!24;UBERON:0001557!3.68e-09!24;UBERON:0001042!3.68e-09!24;UBERON:0008814!3.68e-09!24;UBERON:0009145!3.68e-09!24;UBERON:0004177!5.62e-09!29;UBERON:0003408!1.10e-08!24;UBERON:0000065!2.47e-07!41;UBERON:0002193!3.39e-07!48;UBERON:0002390!3.57e-07!45;UBERON:0003061!3.57e-07!45;UBERON:0000072!5.41e-07!27;UBERON:0001004!9.40e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.44e-25,23;UBERON:0000974,1.44e-25,23;UBERON:0004807,1.44e-25,23;UBERON:0005058,1.44e-25,23;UBERON:0003351,1.44e-25,23;UBERON:0009113,1.44e-25,23;UBERON:0003295,1.44e-25,23;UBERON:0009722,1.44e-25,23;UBERON:0005562,1.44e-25,23;UBERON:0007690,1.44e-25,23;UBERON:0006562,3.03e-24,24;UBERON:0003408,3.03e-24,24;UBERON:0001557,3.03e-24,24;UBERON:0001042,3.03e-24,24;UBERON:0008814,3.03e-24,24;UBERON:0009145,3.03e-24,24;UBERON:0000072,7.25e-21,27;UBERON:0004177,5.25e-19,29;UBERON:0005057,5.25e-19,29;UBERON:0000077,3.40e-16,35;UBERON:0002193,1.92e-14,48;UBERON:0002405,1.92e-14,48;UBERON:0002390,2.02e-14,45;UBERON:0003061,2.02e-14,45;UBERON:0000065,2.83e-14,41;UBERON:0007811,3.77e-14,36;UBERON:0001004,8.76e-14,42;UBERON:0000153,6.54e-11,43;UBERON:0000926,5.09e-10,120;UBERON:0004120,5.09e-10,120;UBERON:0006603,5.09e-10,120;UBERON:0003929,2.39e-07,55;UBERON:0002368,4.41e-07,60;UBERON:0000490,9.23e-07,66 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.33575854382378,0,2.58246646883153,1.40788722151667,2.34064526321993,1.71217968225505,2.23362045186942,2.56801094896809,2.88487327982691,0.666219523631325,0.809901069559304,0.699561878128147,3.62781490161973,3.29074640653773,2.97072756258621,3.23164502574065,0.595745707205312,0,0.319984845586813,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0.288851619751275,0,0,1.67412652294763,0,1.57057123192139,2.35292595212406,1.36609096991689,0.971020706062307,0.125896817975577,0.202753862439029,0,0,0.65407546914134,0,0.58328969722285,0.839918529752175,0,3.52343472721246,1.45072428402269,3.36093799142464,0.771778308107841,0.286533439938757,0,0.809265843438391,0.528990979272033,0,0.338844532069132,0.889294796111139,0.449949858640699,0.988866362566974,0,0,0,1.03689612308478,0.540023753326763,1.05162480675691,1.42825492201902,0.883474163806454,0.857435594504678,0.862609239164127,0.919218786610021,0,0.638436690425939,0.153606533256243,0.527545150920775,1.37231465403614,0,0.558365998002762,0.56276261003168,0.30559649555362,0,0.569486723196412,0.372798891650601,0.151452386666368,0.377857800533928,0.579728977403356,0,0.679971333707751,0,0,0,0.421333260395256,0.511290967734173,0,0,0,0,0,0,0.216491041011214,0,0,0.22836775943812,1.55362730188303,0.593768556259299,1.38788261412909,0,0,0,0.23517741427141,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0.662524555381181,0.484875253135222,0,0.585561594023094,0.628340120440365,0.255457055208591,0.359445373517761,0,0.762421362438388,0.149790639404823,0,1.25654352112864,1.04294592115366,0.511430914660661,1.0389402227978,0.811206315338788,0.611036183101898,1.49288364732112,0.252722758433675,0,0.520481771850815,0.689706313300419,0.180062129805349,0.452114453507145,0.476255494059295,0.12811372028485,0.187403449119458,0.517406741478031,0.862271971731369,0.189106080167819,0.703804496655795,0,0.834141747676794,0.348252166522167,0.61734640922383,1.39323986772945,0.702213187313235,0,0.284163499395593,1.03562886267751,0.234526059981096,0.720248245844059,0.946978942340841,0.196764231747404,0.154267112887378,0.465067889500816,0.268273401399619,0.116765342367169,0.329119699826961,0.656669856316381,0,0.292399974850665,0,0.268412837520744,0.630869845692382,0.823236899034275,0.330418782983798,0.264450566663544,0.426576501070468,0.464473343720877,0.515469845288373,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0,0.198956472041151,0.19496408711912,1.79763881730844,0.216138049874694,0,0.948339504765408,0.342745537829186,1.1270773567308,0.407302655690628,0.387904974335251,0.350679099451593,0.379419222745544,0,0.31399745568275,0.123397163921801,0.296452627087149,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0,0.575392274901621,0.162135226775035,0,0,0.744281895337007,0.312037673114561,0,0,0,0.923765950833023,0.568474235311454,0.814824882210129,0.339490171550376,0.469380496577004,1.17254380209271,1.19021820443007,0.195133647857799,0.472905432318573,0.664394068946325,0.159454768657487,0.81931657357869,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,0.642202359951168,0.937693492737625,0.327869890753351,0,0.631016438832513,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0,0.584511715822624,0.790575555893047,0.321321316421807,0.567760340833074,1.24645922567079,0.488660878060728,0.824850614862677,0,0.485561272309963,2.11626489875326,0,0.590603785761546,0.614870295887855,0,0,0.356497378384721,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0.857348140126369,0,0.713475270408282,0.822745103010605,0.913394847343798,0.704015124191131,0.63549621259146,0.220528398054962,0.32977250588296,0.645857706783622,0.241251699712623,1.07435109602823,0.164140899745061,0,0.18542530201051,0.683483523191411,0.206386867963223,0.740778109478847,0.376736914009382,0.683471138605126,0.228778173206523,0.679913719975421,0.419854356970974,0.829199842826543,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.247960367176008,0,0.259229946583586,0,16.9107881605257,1.04661582230785,0.165458490457098,0.777804753376191,1.42075805825504,0.844780627453891,1.64300134104056,0.651021924219751,1.46803082195995,5.55643477899814,13.2493802878618,8.21628913633263,1.62180172232131,1.33524244314275,2.33857481360031,2.68540043501222,5.76175928865668,5.04820887983869,5.31682297828478,5.85605409699256,6.32516495236499,5.74709255279991,6.52967800956341,5.29165129021812,5.84384510907845,0.226730383615211,0.221985953374065,0.179427713218951,0,0,0,0.183151624267265,1.07184189539533,0,0.564751842617067,0,1.14579102687879,0.515559547031063,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0.726511433089237,0,0.512200817262403,0.243106717068294,0,0.551530525350042,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,1.2673964994512,0.377252682772152,0.187283014939765,0.448176066834085,0.459483751644906,0.476293691283074,0.347652977834566,0,0,0.147198920134397,0,0.70990322463735,0.238436189947321,0.145346416632329,0.470546902076653,0,0.365855945745545,0.263069711437843,0.271608227691724,0,0.711810108745045,0.394017929502254,0.409231043169689,0.154936841185966,0.578719832943424,0.499621155875892,0,0.644613162144895,0.191288332068843,0,0.463735671240843 | |phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.33575854382378,0,2.58246646883153,1.40788722151667,2.34064526321993,1.71217968225505,2.23362045186942,2.56801094896809,2.88487327982691,0.666219523631325,0.809901069559304,0.699561878128147,3.62781490161973,3.29074640653773,2.97072756258621,3.23164502574065,0.595745707205312,0,0.319984845586813,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0.288851619751275,0,0,1.67412652294763,0,1.57057123192139,2.35292595212406,1.36609096991689,0.971020706062307,0.125896817975577,0.202753862439029,0,0,0.65407546914134,0,0.58328969722285,0.839918529752175,0,3.52343472721246,1.45072428402269,3.36093799142464,0.771778308107841,0.286533439938757,0,0.809265843438391,0.528990979272033,0,0.338844532069132,0.889294796111139,0.449949858640699,0.988866362566974,0,0,0,1.03689612308478,0.540023753326763,1.05162480675691,1.42825492201902,0.883474163806454,0.857435594504678,0.862609239164127,0.919218786610021,0,0.638436690425939,0.153606533256243,0.527545150920775,1.37231465403614,0,0.558365998002762,0.56276261003168,0.30559649555362,0,0.569486723196412,0.372798891650601,0.151452386666368,0.377857800533928,0.579728977403356,0,0.679971333707751,0,0,0,0.421333260395256,0.511290967734173,0,0,0,0,0,0,0.216491041011214,0,0,0.22836775943812,1.55362730188303,0.593768556259299,1.38788261412909,0,0,0,0.23517741427141,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0.662524555381181,0.484875253135222,0,0.585561594023094,0.628340120440365,0.255457055208591,0.359445373517761,0,0.762421362438388,0.149790639404823,0,1.25654352112864,1.04294592115366,0.511430914660661,1.0389402227978,0.811206315338788,0.611036183101898,1.49288364732112,0.252722758433675,0,0.520481771850815,0.689706313300419,0.180062129805349,0.452114453507145,0.476255494059295,0.12811372028485,0.187403449119458,0.517406741478031,0.862271971731369,0.189106080167819,0.703804496655795,0,0.834141747676794,0.348252166522167,0.61734640922383,1.39323986772945,0.702213187313235,0,0.284163499395593,1.03562886267751,0.234526059981096,0.720248245844059,0.946978942340841,0.196764231747404,0.154267112887378,0.465067889500816,0.268273401399619,0.116765342367169,0.329119699826961,0.656669856316381,0,0.292399974850665,0,0.268412837520744,0.630869845692382,0.823236899034275,0.330418782983798,0.264450566663544,0.426576501070468,0.464473343720877,0.515469845288373,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0,0.198956472041151,0.19496408711912,1.79763881730844,0.216138049874694,0,0.948339504765408,0.342745537829186,1.1270773567308,0.407302655690628,0.387904974335251,0.350679099451593,0.379419222745544,0,0.31399745568275,0.123397163921801,0.296452627087149,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0,0.575392274901621,0.162135226775035,0,0,0.744281895337007,0.312037673114561,0,0,0,0.923765950833023,0.568474235311454,0.814824882210129,0.339490171550376,0.469380496577004,1.17254380209271,1.19021820443007,0.195133647857799,0.472905432318573,0.664394068946325,0.159454768657487,0.81931657357869,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,0.642202359951168,0.937693492737625,0.327869890753351,0,0.631016438832513,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0,0.584511715822624,0.790575555893047,0.321321316421807,0.567760340833074,1.24645922567079,0.488660878060728,0.824850614862677,0,0.485561272309963,2.11626489875326,0,0.590603785761546,0.614870295887855,0,0,0.356497378384721,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0.857348140126369,0,0.713475270408282,0.822745103010605,0.913394847343798,0.704015124191131,0.63549621259146,0.220528398054962,0.32977250588296,0.645857706783622,0.241251699712623,1.07435109602823,0.164140899745061,0,0.18542530201051,0.683483523191411,0.206386867963223,0.740778109478847,0.376736914009382,0.683471138605126,0.228778173206523,0.679913719975421,0.419854356970974,0.829199842826543,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.247960367176008,0,0.259229946583586,0,16.9107881605257,1.04661582230785,0.165458490457098,0.777804753376191,1.42075805825504,0.844780627453891,1.64300134104056,0.651021924219751,1.46803082195995,5.55643477899814,13.2493802878618,8.21628913633263,1.62180172232131,1.33524244314275,2.33857481360031,2.68540043501222,5.76175928865668,5.04820887983869,5.31682297828478,5.85605409699256,6.32516495236499,5.74709255279991,6.52967800956341,5.29165129021812,5.84384510907845,0.226730383615211,0.221985953374065,0.179427713218951,0,0,0,0.183151624267265,1.07184189539533,0,0.564751842617067,0,1.14579102687879,0.515559547031063,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0.726511433089237,0,0.512200817262403,0.243106717068294,0,0.551530525350042,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,1.2673964994512,0.377252682772152,0.187283014939765,0.448176066834085,0.459483751644906,0.476293691283074,0.347652977834566,0,0,0.147198920134397,0,0.70990322463735,0.238436189947321,0.145346416632329,0.470546902076653,0,0.365855945745545,0.263069711437843,0.271608227691724,0,0.711810108745045,0.394017929502254,0.409231043169689,0.154936841185966,0.578719832943424,0.499621155875892,0,0.644613162144895,0.191288332068843,0,0.463735671240843 | ||
|short_description=p7@Cap1 | |||
}} | }} |
Latest revision as of 07:15, 26 September 2015
Short description: | p7@Cap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Cap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:687 |
Association with transcript: | -24bp_to_ENSMUST00000106257_5end |
EntrezGene: | Cap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data