FFCP PHASE1:Mm9::chr5:122714387..122714464,-: Difference between revisions

Latest revision as of 20:01, 1 October 2015

Short description:	p1@Tctn1
Species:	Mouse (Mus musculus)
DPI dataset:	NA
TSS-like-by-RIKEN-classifier(Yes/No):	NA
DHS support(Yes/No):	NA
Description:	CAGE_peak_1_at_Tctn1_5end
Coexpression cluster:	MCL_coexpression_mm9:3121
Association with transcript:	4bp_to_ENSMUST00000053561, ENSMUST00000111738, ENSMUST00000141281, NM_001039153, uc008zkx.1, uc012ecx.1, uc012ecy.1, uc012ecz.1_5end
EntrezGene:	Tctn1
Link to Zenbu:	ZENBU

View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser

CAGE Expression

Sample	p1@Tctn1
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	16.18
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	3.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	5.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	4.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	4.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	4.87
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	3.50
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	1.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	0.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	0.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	0.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	0.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	7.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	6.07
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	7.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	16.09
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	15.91
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	12.73
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	27.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	7.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	6.79
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	4.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	3.44
GP2+ M cell, pool1.CNhs13228.11845-124H9	1.15
GP2+ M cell, pool2.CNhs13231.11846-124I1	3.02
GP2+ M cell, pool3.CNhs13240.11847-124I2	3.02
Ileum epithelium, pool1.CNhs13199.10252-104B9	3.23
Ileum epithelium, pool2.CNhs13232.10253-104C1	3.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	4.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	17.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	9.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	0.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	2.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	3.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	3.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	3.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	6.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	4.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	6.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	3.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	3.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	16.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	16.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	16.52
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	39.12
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	19.84
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	30.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	26.05
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	21.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	35.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	8.89
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	1.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	1.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	12.35
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	20.63
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	12.38
Mouse Granule cells, donor1.CNhs12131.11713-123C3	15.58
Mouse Granule cells, donor2.CNhs12357.11731-123E3	22.75
Mouse Granule cells, donor3.CNhs12108.11636-122C7	18.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	22.70
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	16.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	13.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	18.47
Mouse Microglia, donor1.CNhs12629.11718-123C8	32.36
Mouse Microglia, donor2.CNhs12634.11736-123E8	46.49
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	9.75
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	11.07
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	8.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	26.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	25.62
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	7.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	7.09
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	16.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	16.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	20.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	20.89
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	21.76
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	18.75
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	18.75
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	16.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	23.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	16.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	22.69
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	19.79
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	17.34
Mouse Schwann, donor1.CNhs12507.11728-123D9	4.54
Mouse Schwann, donor2.CNhs12573.11746-123F9	5.82
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	17.10
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	2.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	1.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	5.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	3.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	8.96
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	7.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	9.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	6.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	9.54
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	26.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	21.82
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	63.70
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	28.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	10.61
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	13.93
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	11.63
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	9.25
accessory axillary lymph node, adult.CNhs10475.1063-29H9	17.09
adrenal gland, adult.CNhs10508.49-24D7	17.81
adrenal gland, embryo E14.CNhs11038.406-44C5	10.58
adrenal gland, embryo E16.CNhs11004.1254-43D6	9.44
adrenal gland, embryo E17.CNhs11043.1263-45I1	11.30
adrenal gland, embryo E18.CNhs11026.1262-18F5	12.96
adrenal gland, neonate N00.CNhs11191.1311-23C1	17.76
adrenal gland, neonate N25.CNhs11223.1377-27I3	13.45
amnion, adult pregnant day17.5.CNhs10488.583-22A8	11.12
aorta, adult.CNhs10498.46-23H1	10.56
bone (os femoris), adult.CNhs10483.56-12G2	6.19
bone (os femoris), neonate N02.CNhs11227.1985-43F5	15.37
bone (os femoris), neonate N16.CNhs11225.1525-43A6	15.46
bone (os femoris), neonate N20.CNhs11195.1350-25C3	9.70
cecum, adult.CNhs10467.37-13H4	9.32
cerebellum, adult.CNhs10494.15-8B2	16.98
cerebellum, neonate N30.CNhs11135.1395-42I2	19.06
colon, adult.CNhs10468.36-18H7	7.66
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	3.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	4.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	4.57
corpora quadrigemina, adult.CNhs10501.16-22A4	20.82
corpus striatum, adult.CNhs10487.19-21D8	21.96
corpus striatum, neonate N00.CNhs11226.630-43F1	17.21
cortex, adult.CNhs10473.12-14D5	19.29
cortex, neonate N30.CNhs11107.1392-42F2	14.32
diencephalon, adult.CNhs10482.20-12F2	13.51
diencephalon, neonate N30.CNhs11201.1388-42B2	18.66
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	17.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	19.16
epididymis, adult.CNhs10490.58-23B2	33.61
eyeball, adult.CNhs10484.31-12G4	10.10
eyeball, embryo E12.CNhs11016.345-16C6	10.67
eyeball, embryo E14.CNhs10521.399-16E2	11.73
eyeball, embryo E15.CNhs10593.426-16C9	11.52
eyeball, embryo E17.CNhs11023.1261-18D4	12.96
eyeball, neonate N00.CNhs11207.633-15C6	21.70
eyeball, neonate N01.CNhs11140.1532-43E7	22.16
eyeball, neonate N02.CNhs11205.1551-44G8	19.12
eyeball, neonate N16.CNhs11188.777-19A2	28.97
forelimb, embryo E11.CNhs10596.335-25E2	6.25
forelimb, embryo E12.CNhs10600.359-14H2	17.02
forelimb, embryo E13.CNhs10589.384-1E2	12.49
forelimb, embryo E14.CNhs10577.413-26A8	13.37
forelimb, embryo E15.CNhs11007.437-20E7	13.90
forelimb, embryo E17.CNhs10598.1517-43C4	14.28
forelimb, embryo E18.CNhs11008.1520-43B5	13.58
gonad, embryo E13.CNhs11044.1564-45I6	14.33
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	0.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	4.37
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	4.55
heart, embryo E11.CNhs10586.331-24E9	6.21
heart, embryo E12.CNhs11015.353-12F5	4.69
heart, embryo E13.CNhs11013.376-3I9	6.30
heart, embryo E14.CNhs10597.403-26D4	9.94
heart, embryo E15.CNhs11017.431-16C8	7.87
heart, embryo E16.CNhs11021.457-17C6	5.86
heart, embryo E17.CNhs11025.479-18E5	7.21
heart, embryo E18.CNhs11030.1283-20G3	8.05
heart, neonate N00.CNhs11213.639-21E3	9.57
heart, neonate N03.CNhs11221.1349-25I2	10.20
heart, neonate N10.CNhs11118.749-24G1	7.88
heart, neonate N16.CNhs11209.782-15G1	10.86
heart, neonate N20.CNhs11127.821-26I6	7.60
heart, neonate N25.CNhs11196.1351-25D3	7.03
heart, neonate N30.CNhs11202.1390-42D2	12.21
hippocampus, adult.CNhs10478.13-16E8	15.56
hippocampus, neonate N00.CNhs11228.627-43G1	18.93
intestinal mucosa, adult.CNhs10506.860-29I3	7.60
intestine, adult.CNhs10496.178-9A3	3.70
intestine, embryo E12.CNhs11019.1251-16I5	11.09
intestine, embryo E13.CNhs11010.381-16D5	10.68
intestine, embryo E15.CNhs10602.976-16D8	8.76
intestine, embryo E16.CNhs10585.463-22H4	8.07
intestine, embryo E17.CNhs10582.482-18D3	10.23
intestine, embryo E18.CNhs10526.1289-20F7	6.47
intestine, neonate N00.CNhs11126.644-26D1	6.17
intestine, neonate N01.CNhs11192.1322-23E9	5.76
intestine, neonate N06.CNhs11102.688-20B8	10.05
intestine, neonate N07.CNhs11095.720-20F2	11.34
intestine, neonate N10.CNhs11098.755-23A5	9.55
intestine, neonate N20.CNhs11187.827-18D1	4.49
intestine, neonate N25.CNhs11121.1352-25E3	5.40
intestine, neonate N30.CNhs11131.1384-42G1	6.17
kidney, embryo E14.CNhs10606.411-4I9	13.47
kidney, embryo E15.CNhs10997.434-16F8	15.31
kidney, embryo E16.CNhs10584.464-22A5	18.03
kidney, embryo E17.CNhs11028.483-18I2	16.70
kidney, embryo E18.CNhs11001.1288-20C7	17.07
kidney, neonate N00.CNhs11214.646-21G7	19.29
kidney, neonate N10.CNhs11206.758-6D5	21.12
kidney, neonate N20.CNhs11113.832-19I1	16.24
kidney, neonate N25.CNhs11122.1353-25F3	18.37
kidney, neonate N30.CNhs11203.1385-42H1	16.54
liver, adult pregnant day01.CNhs10466.508-5B2	4.74
liver, embryo E12.CNhs10601.355-15F8	4.84
liver, embryo E13.CNhs10524.378-3H6	3.93
liver, embryo E14.CNhs10594.409-16E1	3.60
liver, embryo E15.CNhs10520.433-16D7	4.26
liver, embryo E16.CNhs10523.462-17F5	2.89
liver, embryo E17.CNhs10510.481-18A3	5.35
liver, embryo E18.CNhs10579.499-43G4	8.63
liver, neonate N00.CNhs11117.641-24F4	10.86
liver, neonate N03.CNhs11123.1345-25G2	6.59
liver, neonate N06.CNhs11101.684-20A8	12.94
liver, neonate N07.CNhs11103.716-20H2	6.33
liver, neonate N10.CNhs11115.751-24B9	10.92
liver, neonate N20.CNhs11220.823-25A3	7.83
liver, neonate N25.CNhs11198.1368-26H1	4.84
liver, neonate N30.CNhs11106.1382-42D1	7.72
lung, adult.CNhs10474.28-22B1	18.11
lung, embryo E12.CNhs10522.354-16G2	7.77
lung, embryo E14.CNhs10604.404-26F8	8.96
lung, embryo E15.CNhs11020.432-17C5	13.92
lung, embryo E16.CNhs10998.458-17B6	16.43
lung, embryo E17.CNhs10605.480-44A6	21.61
lung, embryo E18.CNhs10583.1287-20I6	20.00
lung, neonate N00.CNhs11224.640-42C6	22.83
lung, neonate N06.CNhs11212.683-20E5	16.71
lung, neonate N07.CNhs11111.715-19A3	18.82
lung, neonate N10.CNhs11219.750-23E6	22.48
lung, neonate N20.CNhs11109.822-18A4	15.08
lung, neonate N25.CNhs11119.1359-25C7	13.99
lung, neonate N30.CNhs11133.1394-42H2	15.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	13.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	16.86
mammary gland, adult lactating day02.CNhs10480.595-22B6	4.92
mammary gland, adult pregnant day19.CNhs10476.588-5H2	7.17
medulla oblongata, adult.CNhs10477.17-12C2	16.22
medulla oblongata, neonate N30.CNhs11200.1396-42A3	18.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	9.34
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	8.08
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	13.25
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	14.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	22.40
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	17.92
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	18.49
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	21.80
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	13.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	20.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	26.48
olfactory brain, adult.CNhs10489.18-22I9	35.02
ovary, adult.CNhs10507.91-2I7	19.87
ovary, embryo E18.CNhs11040.505-44H7	19.05
ovary, neonate N00.CNhs11217.1299-22I4	21.01
oviduct, adult pregnant day01.CNhs10500.988-6G6	29.86
pancreas, adult.CNhs10486.34-16E4	9.29
pancreas, embryo E14.CNhs11012.405-44F4	9.95
pancreas, embryo E15.CNhs11042.1556-45F2	8.77
pancreas, embryo E16.CNhs11003.460-26E5	9.24
pancreas, embryo E17.CNhs10599.1558-45G3	10.93
pancreas, embryo E18.CNhs10580.1535-43I7	12.91
pancreas, neonate N00.CNhs11105.645-26G9	17.06
pancreas, neonate N01.CNhs11138.1531-43D7	18.18
pancreas, neonate N02.CNhs11139.1539-43D8	14.97
pancreas, neonate N16.CNhs11136.787-43B6	9.80
pancreas, neonate N25.CNhs11094.1555-45E2	5.27
pancreas, neonate N30.CNhs11182.1548-44H5	11.34
pituitary gland, adult.CNhs10493.21-1G8	26.55
pituitary gland, embryo E12.CNhs11018.346-16E6	17.83
pituitary gland, embryo E13.CNhs11009.370-44C7	22.51
pituitary gland, embryo E14.CNhs11037.398-44A5	19.72
pituitary gland, embryo E15.CNhs10592.427-16B9	31.92
pituitary gland, embryo E16.CNhs11036.449-43F6	36.92
pituitary gland, embryo E17.CNhs11039.1265-44F5	28.63
pituitary gland, neonate N00.CNhs11190.1308-22E9	29.23
placenta, adult pregnant day10.CNhs10472.539-13I7	10.33
placenta, adult pregnant day17.CNhs10464.577-18G3	12.07
prostate, adult.CNhs10470.859-1F8	11.03
skin, adult.CNhs10492.30-1C3	12.53
skin, neonate N00.CNhs11124.650-25G4	14.53
skin, neonate N03.CNhs11215.662-22H3	13.75
skin, neonate N06.CNhs11097.693-20I5	10.74
skin, neonate N10.CNhs11108.762-6C4	14.12
small intestine, neonate N16.CNhs11114.790-21I1	5.25
spinal cord, adult.CNhs10505.24-13C9	18.36
spleen, adult.CNhs10465.25-2G2	8.03
spleen, embryo E16.CNhs11035.461-43C1	12.80
spleen, embryo E18.CNhs11011.1271-21F2	8.89
spleen, neonate N10.CNhs11116.752-24D1	9.98
spleen, neonate N20.CNhs11112.824-19H1	12.71
spleen, neonate N25.CNhs11099.1354-25G3	9.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	5.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	5.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	4.70
stomach, adult.CNhs10503.33-1H6	13.37
stomach, embryo E12.CNhs10588.356-43E3	7.91
stomach, embryo E15.CNhs10603.1252-16G8	12.81
stomach, embryo E16.CNhs11022.459-17D4	11.56
stomach, embryo E17.CNhs11006.1035-18D5	7.74
stomach, embryo E18.CNhs10999.1286-20C6	8.73
stomach, neonate N03.CNhs11193.1340-24B8	9.31
stomach, neonate N07.CNhs11210.718-18A9	11.74
stomach, neonate N25.CNhs11104.1355-25E4	6.81
stomach, neonate N30.CNhs11134.1386-42I1	8.94
submandibular gland, adult.CNhs10469.59-29C1	11.81
testis, adult.CNhs10504.57-7G5	67.64
testis, embryo E13.CNhs11031.389-23F5	13.76
testis, embryo E15.CNhs11034.443-27C5	10.75
testis, embryo E16.CNhs11033.470-26G5	15.94
testis, embryo E17.CNhs11029.486-18I5	10.59
testis, embryo E18.CNhs11027.503-18G5	15.88
testis, neonate N00.CNhs11189.1300-22B7	14.20
testis, neonate N07.CNhs11222.726-26I4	17.19
testis, neonate N10.CNhs11204.763-44D9	14.68
testis, neonate N20.CNhs11110.839-18H3	47.83
testis, neonate N30.CNhs11130.1391-42E2	63.94
thymus, adult.CNhs10471.38-12B5	12.96
thymus, embryo E14.CNhs11041.402-44I4	8.72
thymus, embryo E15.CNhs11005.430-45I2	8.32
thymus, embryo E16.CNhs11002.456-26C5	7.54
thymus, embryo E17.CNhs10581.478-18C1	10.74
thymus, embryo E18.CNhs10595.1273-19G4	7.55
thymus, neonate N02.CNhs11181.1541-43F8	7.09
thymus, neonate N03.CNhs11137.2104-43C7	10.19
thymus, neonate N06.CNhs11197.681-26C4	12.42
thymus, neonate N07.CNhs11211.713-19D3	13.11
thymus, neonate N10.CNhs11194.748-24E4	12.70
thymus, neonate N20.CNhs11186.820-7A2	12.96
thymus, neonate N25.CNhs11125.1362-25G7	12.80
thymus, neonate N30.CNhs11132.1393-42G2	16.01
tongue, adult.CNhs10499.32-1B4	9.52
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	15.54
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	14.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	21.15
urinary bladder, adult.CNhs10481.879-12E4	11.59
uterus, adult pregnant day19.CNhs10497.590-15F5	13.51
uterus, adult.CNhs10509.92-27E5	14.84
vagina, adult.CNhs10502.89-27D5	7.93
vesicular gland, adult.CNhs10491.51-27F8	11.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	12.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	15.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	18.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	22.68
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	16.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	19.64
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	14.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	18.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	11.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	21.75
whole body, embryo E11.CNhs11014.324-5I8	2.91
whole body, embryo E12.CNhs10587.857-27C9	14.76
whole body, embryo E13.CNhs10512.372-23H2	10.59
whole body, embryo E14.5.CNhs10578.420-27D2	12.16
whole body, embryo E14.CNhs10519.395-14B1	6.92
whole body, embryo E16.CNhs10514.453-14F2	6.99
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	13.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	11.13
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	16.05
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	14.15
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	10.90
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	10.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	12.45
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	11.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	11.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	15.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	17.15
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	12.73
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	10.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	13.84
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	8.91
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	12.78
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	11.21
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	12.65
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	11.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	11.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	10.79
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	13.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	12.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	19.64
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	11.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	16.45
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	12.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	11.78
whole body, embryo E17.5.CNhs10513.490-9F9	13.89
whole body, embryo E17.CNhs10517.475-3I5	12.99
whole body, embryo E18.CNhs10516.493-3B3	11.46
whole body, neonate N00.CNhs10525.657-19C2	18.26
whole body, neonate N01.CNhs10576.659-23C6	18.17
whole body, neonate N06.CNhs10515.692-21D1	13.24
whole body, neonate N10.CNhs10518.761-6B4	11.13

Click each plot point to find sample in table

Ontology-based sample term enrichment analysisSummary:This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space Analyst: Hideya Kawaji link to source dataset data

Cell type
Ontology term	p-value	n
ectodermal cell	5.03e-10	44
neurectodermal cell	5.03e-10	44
neural cell	1.58e-09	43
electrically responsive cell	1.40e-07	39
electrically active cell	1.40e-07	39
neuron	5.48e-07	33
neuronal stem cell	5.48e-07	33
neuroblast	5.48e-07	33
electrically signaling cell	5.48e-07	33

Uber anatomy
Ontology term	p-value	n
central nervous system	9.51e-22	73
nervous system	5.27e-20	75
ectoderm-derived structure	4.82e-19	95
ectoderm	4.82e-19	95
presumptive ectoderm	4.82e-19	95
neurectoderm	8.41e-15	64
neural plate	8.41e-15	64
presumptive neural plate	8.41e-15	64
regional part of nervous system	1.96e-14	54
ecto-epithelium	5.71e-14	73
neural tube	1.07e-13	52
neural rod	1.07e-13	52
future spinal cord	1.07e-13	52
neural keel	1.07e-13	52
brain	9.58e-12	47
future brain	9.58e-12	47
regional part of brain	3.63e-11	46
pre-chordal neural plate	7.83e-10	49
anterior neural tube	3.18e-09	40
structure with developmental contribution from neural crest	3.47e-09	92
regional part of forebrain	7.93e-09	39
forebrain	7.93e-09	39
future forebrain	7.93e-09	39
gray matter	5.79e-07	34

@@ Line 1: / Line 1: @@
 {{FFCP
-|id=chr5:122714387..122714464,-
+|DHSsupport=NA
-|short_description=p1@Tctn1
+|DPIdataset=NA
-|description=CAGE_peak_1_at_Tctn1_5end
-|association_with_transcript=4bp_to_ENSMUST00000053561,ENSMUST00000111738,ENSMUST00000141281,NM_001039153,uc008zkx.1,uc012ecx.1,uc012ecy.1,uc012ecz.1_5end
 |EntrezGene=654470
 |HGNC=
+|MCL_coexpression_id=3121
+|TSSclassifier=NA
 |UniProt=Q8BZ64,D6RDQ2
+|association_with_transcript=4bp_to_ENSMUST00000053561,ENSMUST00000111738,ENSMUST00000141281,NM_001039153,uc008zkx.1,uc012ecx.1,uc012ecy.1,uc012ecz.1_5end
+|cluster_id=chr5:122714387..122714464,-
+|description=CAGE_peak_1_at_Tctn1_5end
+|id=chr5:122714387..122714464,-
+|ontology_enrichment_celltype=CL:0000221!5.03e-10!44;CL:0000133!5.03e-10!44;CL:0002319!1.58e-09!43;CL:0000055!2.33e-09!50;CL:0000393!1.40e-07!39;CL:0000211!1.40e-07!39;CL:0000540!5.48e-07!33;CL:0000047!5.48e-07!33;CL:0000031!5.48e-07!33;CL:0000404!5.48e-07!33
+|ontology_enrichment_celltype_v019_2=CL:0000221,5.03e-10,44;CL:0000133,5.03e-10,44;CL:0002319,1.58e-09,43;CL:0000393,1.40e-07,39;CL:0000211,1.40e-07,39;CL:0000540,5.48e-07,33;CL:0000047,5.48e-07,33;CL:0000031,5.48e-07,33;CL:0000404,5.48e-07,33
+|ontology_enrichment_disease=
+|ontology_enrichment_disease_v019_2=
+|ontology_enrichment_uberon=UBERON:0001017!9.51e-22!73;UBERON:0005743!9.51e-22!73;UBERON:0000073!5.27e-20!75;UBERON:0001016!5.27e-20!75;UBERON:0004121!8.29e-19!102;UBERON:0000924!8.29e-19!102;UBERON:0006601!8.29e-19!102;UBERON:0002346!2.56e-14!71;UBERON:0003075!2.56e-14!71;UBERON:0007284!2.56e-14!71;UBERON:0001049!1.07e-13!52;UBERON:0005068!1.07e-13!52;UBERON:0006241!1.07e-13!52;UBERON:0007135!1.07e-13!52;UBERON:0000033!1.69e-13!63;UBERON:0000955!9.04e-13!50;UBERON:0006238!9.04e-13!50;UBERON:0002616!3.52e-12!49;UBERON:0003056!7.83e-10!49;UBERON:0003080!3.18e-09!40;UBERON:0002780!7.93e-09!39;UBERON:0001890!7.93e-09!39;UBERON:0006240!7.93e-09!39;UBERON:0000153!2.54e-08!94;UBERON:0007811!4.29e-08!86;UBERON:0000475!2.82e-07!200;UBERON:0000468!3.19e-07!333;UBERON:0002020!5.79e-07!34
+|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.51e-22,73;UBERON:0001016,5.27e-20,75;UBERON:0004121,4.82e-19,95;UBERON:0000924,4.82e-19,95;UBERON:0006601,4.82e-19,95;UBERON:0002346,8.41e-15,64;UBERON:0003075,8.41e-15,64;UBERON:0007284,8.41e-15,64;UBERON:0000073,1.96e-14,54;UBERON:0010371,5.71e-14,73;UBERON:0001049,1.07e-13,52;UBERON:0005068,1.07e-13,52;UBERON:0006241,1.07e-13,52;UBERON:0007135,1.07e-13,52;UBERON:0000955,9.58e-12,47;UBERON:0006238,9.58e-12,47;UBERON:0002616,3.63e-11,46;UBERON:0003056,7.83e-10,49;UBERON:0003080,3.18e-09,40;UBERON:0010314,3.47e-09,92;UBERON:0002780,7.93e-09,39;UBERON:0001890,7.93e-09,39;UBERON:0006240,7.93e-09,39;UBERON:0002020,5.79e-07,34
 |phase1_expression=16.1750335575842,3.48975407639361,5.91499011206397,4.23449895829562,4.00716583957078,4.8684988854448,3.50418960893289,1.67860320474049,0.140788722151667,0,0,0.239316476986009,0.684802919724823,0.699363219351979,7.32841475994458,6.07425802169478,6.99561878128147,16.0885704332701,15.9052742982657,12.7316895539409,27.979242459702,7.24823943766463,6.79119451761232,3.99981056983517,3.44113921600755,1.14846392823004,3.01533397311352,3.01659725760245,3.23039813075836,3.52842181663903,4.6563407237614,17.14582818341,9.84103660135312,0,2.02196133825892,3.49092755252834,3.87921776898501,3.76678467663217,6.2506827561904,4.71171369576418,6.47054636834116,3.41522742479223,3.39857247121808,16.1147927008739,16.5244397887809,16.5192076945513,39.119567217402,19.8402892306206,30.9757517655605,26.053606475954,21.1379496654297,35.9381410912429,8.89247812106003,1.45072428402269,1.68046899571232,12.3484529297255,20.6304076755905,12.3761302146586,15.578367486189,22.7466121086974,18.3811107016792,22.7025836486319,16.0073063300005,13.9484456178617,19.7773272513395,18.4724829885986,32.3568119359877,46.4904149439081,9.7468235569969,11.0704869431986,8.62332341540666,26.2798905651499,25.6207507503872,7.96190194897201,7.09256485534949,16.5459381589804,16.5173821499083,20.0469120793745,20.8904885228491,21.761237475482,18.754966938494,18.7528813400434,16.4717969410815,23.6360296213306,16.0438160165651,22.6864010814724,19.7896636310753,17.335148461753,4.54357159999104,5.81901012822248,17.102004833399,2.58127163094416,1.3599426674155,5.93673510801599,3.24888208723835,8.96053774194671,7.44355426698285,9.37366774179318,6.49465011507172,9.54016851177919,26.0560326586859,21.815501160434,63.7013099266614,28.4426681261332,10.6080610095495,13.9347926011304,11.62706223534,9.24889425724386,17.0899003207133,17.813056687779,10.5826049327343,9.43842982767638,11.3001593655469,12.9621470875255,17.7558947774914,13.4463252722753,11.1237735480468,10.5557530551536,6.19227386364912,15.3678507450039,15.4589062922275,9.69750506270444,9.31958806090611,16.9812862266697,19.0596503200244,7.66371165625774,3.35482348616577,4.79922184794726,4.57452817463033,20.8208988772704,21.9600289352941,17.2146462394624,19.2944995413427,14.3200656104985,13.5062228963714,18.6577452527921,17.9237280376557,19.1586734739543,33.6121268716787,10.1012090825508,10.6698763229417,11.7250073261071,11.5239763075424,12.9606143338715,21.7036432292736,22.163673609279,19.1151518101847,28.9747775227698,6.25147179505242,17.0195472151037,12.4925298156404,13.3709396780821,13.9023624612799,14.2783388274088,13.5816210029243,14.3304672109315,0.702213187313235,4.37491442095016,4.54661599032948,6.21377317606506,4.69052119962192,6.30217215113552,9.94327889457883,7.87056926989615,5.86215028972037,7.20855228726264,8.04820204198858,9.5747580741079,10.2027106946358,7.88003827579657,10.8632204791447,7.60239934611728,7.02560368931362,12.2127841071938,15.5614561937454,18.9344486777883,7.59963200862735,3.70230793328962,11.0909890278322,10.6828869055802,8.76298736990235,8.0673409849337,10.229390016864,6.46767128782701,6.16887780007865,5.76446341534038,10.0534083520108,11.3405189063456,9.55324026883689,4.49409704327111,5.40345124686736,6.17337947088538,13.4664209676688,15.3093006897037,18.0332377076929,16.6994088833158,17.0678188707511,19.2873504698376,21.1210033995019,16.2371162777562,18.3688511574409,16.5352199655213,4.74324203339438,4.83850806576673,3.93117990226406,3.59779379815766,4.26006254915856,2.894125917029,5.34714288740982,8.63088412352432,10.8630601939274,6.58947391651396,12.9391385874619,6.32639611036456,10.9213185590096,7.82994521636046,4.84373016509163,7.71909634181387,18.1058126363273,7.76914788258988,8.96307370431142,13.9190970335654,16.4283173801951,21.6083072099942,19.9956658344252,22.8306367993625,16.7093252752562,18.8244986201459,22.4831223807057,15.0754249538479,13.9874835311375,15.1881511510587,13.5712155545345,16.86107619838,4.91764273019036,7.17435540392304,16.215609588767,18.1678114217915,9.3442918864705,8.07906967053994,13.2513452154828,14.055794794679,22.4040333642111,17.9226598464414,18.4922899488387,21.7968928707401,13.3587531552715,20.1656541958805,26.4842811224171,35.024023489977,19.8716119291576,19.0530195923963,21.0124177566113,29.8595922580289,9.2921596837974,9.95400608235424,8.76738315197778,9.24164890803901,10.9261700365886,12.912276213645,17.0562673491026,18.1766864738753,14.9728898921583,9.7971394960103,5.27093042874994,11.3449097573006,26.5542892487955,17.8260483090997,22.5084109781993,19.7190072229065,31.9212420556092,36.9223452436286,28.631529584769,29.2286351150015,10.3255551548033,12.0744280392378,11.0264199027481,12.5313552235525,14.5317984026315,13.7513468836195,10.7435109602823,14.1161173780753,5.24665505933731,18.3571048990405,8.03093139749908,12.7959858137198,8.88933731374616,9.98352822124862,12.7125631780553,9.15112692826091,5.60928818979723,5.73800954526998,4.69879910935041,13.3653886522116,7.90839983952838,12.8091264289915,11.5565714679327,7.73626695253534,8.7345025498471,9.30563990055263,11.7367907129977,6.80565449158477,8.94343315713371,11.8054469486516,67.6431526421028,13.755522236046,10.7548018797113,15.9449974442119,10.5911055251739,15.8818757961331,14.2002258761362,17.1869787994014,14.6803082195995,47.8336559235492,63.9426613892461,12.9564559457553,8.71718425747706,8.31958753035101,7.53540773271211,10.7416017400489,7.54989148168807,7.09153152167816,10.1905773750458,12.4188733436222,13.10757074466,12.7040993272419,12.9618981383871,12.7961749381638,16.0121355988749,9.52267611183888,15.5390167361845,13.9953616310782,21.1534616618739,11.5913756419314,13.5131382324851,14.8352815656485,7.93163002592544,11.5361583928134,12.4245405375755,15.651058041244,18.3326564300607,22.6846200693668,16.4419804744954,19.6402413321322,14.1754725048679,18.0128481289688,11.3285602246051,21.7459330935764,2.90604573235695,14.7639203158381,10.5854835567563,12.1553358534147,6.91723436672342,6.98605332110054,13.1125569402953,11.1258930909003,16.0459604795908,14.1510438587727,10.8996098952803,10.1858224348481,12.4543204934944,11.9086783473057,11.0850455084334,15.2413981210584,17.1508802398386,12.7320085506045,10.3021475200827,13.8366984926333,8.9146005620208,12.7782580434723,11.2065009275241,12.6451382470126,11.7636725519163,11.3383574574847,10.7927503994936,13.6796249947678,12.2223702461276,19.6399795080208,11.1516917036724,16.4502485567191,12.2769312950907,11.7751999301334,13.8892759906422,12.9901500527732,11.462648813825,18.2640395941054,18.1723915465401,13.2354851471709,11.1296561097802
+|short_description=p1@Tctn1
 }}

Personal tools

FFCP PHASE1:Mm9::chr5:122714387..122714464,-: Difference between revisions - resource_browser

Search

Human

Mouse

Rat

Dog

Chicken

Macaque

Cross species

Other

Tools

FFCP PHASE1:Mm9::chr5:122714387..122714464,-: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 20:01, 1 October 2015

	FAQ
	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0