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FFCP PHASE1:Mm9::chr6:113573982..113574031,+: Difference between revisions

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(Created page with "{{FFCP |id=chr6:113573982..113574031,+ |short_description=p1@Vhl |description=CAGE_peak_1_at_Vhl_5end |association_with_transcript=0bp_to_NM_009507,uc009dha.1_5end |Entre...")
 
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{{FFCP
{{FFCP
|id=chr6:113573982..113574031,+
|DHSsupport=NA
|short_description=p1@Vhl
|DPIdataset=NA
|description=CAGE_peak_1_at_Vhl_5end
|association_with_transcript=0bp_to_NM_009507,uc009dha.1_5end
|EntrezGene=22346
|EntrezGene=22346
|HGNC=
|HGNC=
|MCL_coexpression_id=1410
|TSSclassifier=NA
|UniProt=P40338,Q3TTE7
|UniProt=P40338,Q3TTE7
|association_with_transcript=0bp_to_NM_009507,uc009dha.1_5end
|cluster_id=chr6:113573982..113574031,+
|description=CAGE_peak_1_at_Vhl_5end
|id=chr6:113573982..113574031,+
|ontology_enrichment_celltype=CL:0000117!6.70e-13!23;CL:0000337!6.70e-13!23;CL:0000221!5.08e-10!44;CL:0000133!5.08e-10!44;CL:0000540!7.99e-10!33;CL:0000047!7.99e-10!33;CL:0000031!7.99e-10!33;CL:0000404!7.99e-10!33;CL:0002319!1.41e-09!43;CL:0000393!1.61e-07!39;CL:0000211!1.61e-07!39;CL:0000055!2.32e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,6.70e-13,23;CL:0000337,6.70e-13,23;CL:0000221,5.08e-10,44;CL:0000133,5.08e-10,44;CL:0000540,7.99e-10,33;CL:0000047,7.99e-10,33;CL:0000031,7.99e-10,33;CL:0000404,7.99e-10,33;CL:0002319,1.41e-09,43;CL:0000393,1.61e-07,39;CL:0000211,1.61e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.88e-14,73;UBERON:0000073,9.74e-14,54;UBERON:0002346,4.35e-13,64;UBERON:0003075,4.35e-13,64;UBERON:0007284,4.35e-13,64;UBERON:0001016,5.33e-13,75;UBERON:0001049,8.69e-13,52;UBERON:0005068,8.69e-13,52;UBERON:0006241,8.69e-13,52;UBERON:0007135,8.69e-13,52;UBERON:0003056,3.29e-10,49;UBERON:0000955,3.39e-10,47;UBERON:0006238,3.39e-10,47;UBERON:0002616,4.48e-10,46;UBERON:0004121,5.33e-10,95;UBERON:0000924,5.33e-10,95;UBERON:0006601,5.33e-10,95;UBERON:0002020,6.41e-10,34;UBERON:0010371,7.80e-10,73;UBERON:0002780,1.08e-09,39;UBERON:0001890,1.08e-09,39;UBERON:0006240,1.08e-09,39;UBERON:0003080,3.69e-09,40;UBERON:0010314,6.10e-09,92;UBERON:0003528,2.92e-07,29;UBERON:0002791,2.92e-07,29;UBERON:0001893,2.92e-07,29
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4397,7.77638453916969,8.78170843260769,11.3548533148012,5.66430254816247,6.69492991375221,3.92633912976044,4.79575401179634,3.72803587852155,100.337343085786,14.8021380583539,14.5603471602246,13.0282296190512,16.4032975816719,13.3475339137715,13.6134396829075,12.7600297147071,17.0920731413909,13.5287107662563,35.4276907697175,6.63623353319174,10.5417111950885,10.0656738021531,6.75588279484534,7.51912121803422,8.54329825559439,8.17329056735788,9.59981926634752,7.37055084621478,9.22102360525498,8.67105192176829,9.74578807397524,11.4492091551992,10.6357980985228,4.0811469050738,4.66170502085536,2.15313255862742,3.35769232728157,3.86379188064381,5.81815673898664,7.69236821922513,3.64426244434412,3.00943262421218,10.7302850097243,5.9842280745933,10.3121192419091,8.42080593484069,15.7568979547248,12.0863023582352,9.45031500324528,9.45674526770863,9.5159905886683,5.69536342927002,14.6340160093689,10.7736715818278,10.5854835567563,8.75184181445858,9.4325923182592,8.82448840560068,8.22312892865976,8.44743734679466,5.13470735346904,6.06473308233114,4.56262739802432,7.1678009726709,6.74218853783153,7.10679191694049,7.75378830900779,9.0495801343784,9.50251472747815,7.90927803901191,6.59337441285291,6.32955356577908,6.51451579532289,6.92155644021416,5.48403236878838,7.1219744149841,6.11710972699649,6.8537832392258,5.67076715905595,4.99832451731901,8.28405094459757,7.2948495315506,6.64356101495375,6.30428687203606,5.72923460437565,7.2820315357404,6.17301155139652,11.2414760072076,6.55008503647143,6.66100267549725,4.3996316375834,5.7353768971074,5.10109238364927
|phase1_expression=16.335182404689,12.9120900826564,9.09998478779072,8.16653370528441,14.0250804384977,6.21153306073992,10.2789561862031,12.0084690800666,9.57363310631334,9.59664557920173,9.93064215707929,9.89174771542172,10.6144452557348,10.9275503023747,3.66420737997229,3.44207954562704,2.79824751251259,13.4071420277251,11.1062691220648,14.429248161133,22.0262121491271,11.0212955832983,10.1867917764185,3.99981056983517,6.65286915094793,14.3557991028755,9.90752591165872,6.89507944594845,8.17100703662408,7.81293402255785,4.43461021310609,6.98533740805594,7.38077745101484,0,11.554064790051,6.98185510505668,5.10423390655923,25.5304294749514,28.1280724028568,17.7998072951091,29.9998058895817,27.3218193983378,34.4712350652119,5.79125362687656,6.48812359804893,7.34187008646726,10.9534788208725,13.0815093828268,12.3024262331304,12.2490836416799,8.53917171914711,4.31257693094915,12.9192606664457,10.1550699881588,8.06625117941913,6.43148590089868,7.16333599846892,9.28209766099396,24.0756588422921,22.7466121086974,18.3811107016792,9.4876468979357,2.66788438833342,8.99899717281399,7.9109309005358,7.8152812644071,17.6764065205859,18.4424786554346,18.5604406032175,21.3309382564071,21.8737959805437,23.7090317055157,20.9825113904033,21.435889862617,23.0029130443767,22.9804696652505,13.2139057199266,11.1087984134113,11.981309593987,22.6844414895933,19.3038928001084,15.6274011167028,10.8881369610539,11.2552522006336,12.5294563176984,25.6326869362091,16.9422300150933,19.7583412574819,6.05809546665472,3.55186332501892,7.24661221754194,6.88339101585109,8.15965600449301,2.69851595818909,1.94932925234301,1.34408066129201,7.8648875273781,8.18065548374677,8.83272415649754,6.71345191569646,14.9294024963281,6.41632387071589,5.09610479413291,7.11066703153331,5.62876706629157,5.57391704045217,5.56076889516262,7.19358442230078,6.73238497482646,5.64080128446334,9.36820764537134,12.7875500891099,9.4552353874984,10.5505848386836,9.05433044944927,8.92232798440696,10.3821886448437,3.7595832799177,5.30766331169925,4.20593809863264,5.30019644304944,4.363877278217,3.72783522436244,10.8328894894272,11.1006754611131,4.59822699375465,11.981512450592,10.7982491578813,12.1987417990142,6.29120685500255,9.15001205637253,13.8219787324151,9.38651329038293,10.7400492078739,10.5971902725376,8.76102820565891,12.9335992089902,7.71323217782577,7.32895999457657,6.73413938836717,12.1012011955314,12.1848115349741,12.2442248267637,11.6042709733501,13.0630078370549,11.0177799444971,11.056803498048,6.20888089773638,9.26942369611222,8.88798576788751,10.7330185740009,14.4669183402199,11.1218899690239,4.179025998266,8.23128545631774,11.9420560091096,7.02213187313235,9.77922047035918,10.2298859782413,8.90640821902658,9.14651633926275,9.54328925743379,9.46978942340841,9.64144735562279,8.79322543458056,7.20855228726264,6.9751084363901,8.05680862333469,3.78487654801005,3.447516745661,5.02626619184305,5.26319954731196,5.26920276698522,3.75777972529041,9.04246778825747,12.4514580978934,2.31293148088659,5.28901133327089,10.6644125267617,10.2184135618593,8.76298736990235,6.6555563125703,6.44896327150124,7.60902504450237,5.21981967698963,10.0466362381647,9.29940272560997,6.76452004939913,6.82374304916921,8.08937467788799,7.99710784536369,5.17767310461355,12.3284135619503,8.91138398355885,7.88954149711563,8.96065842519383,8.72786192254316,7.29412526859313,9.48548056863859,6.9376769550413,9.10592621479974,6.91024117962083,7.11486305009157,4.83850806576673,4.52085688760367,4.04751802292737,3.44862206360455,4.3411888755435,4.07401362850272,3.74004978686054,5.5125977103512,4.94210543738547,12.9391385874619,8.55924179637558,7.48890415474945,5.55673531483646,5.74071723270119,2.8946611281802,6.65111484599777,11.1799932944586,7.17045896344914,7.63852885988347,5.86725620721255,7.03526281255626,10.9500074807566,6.24427673144956,9.14283835815908,7.75126413770712,9.24837658213425,7.86543910635542,7.42545422023351,9.69148692496127,6.03165135757089,9.79030230873677,0.983528546038072,1.65562047782839,8.50918126935297,9.84578167374507,6.88526770582037,4.03953483526997,11.3582958989852,5.85658116444958,6.03185513651837,7.16906393857656,9.35754431146055,10.190755108398,7.2865926301481,7.59865230569411,7.11518000303742,10.2822821254978,8.65834519770439,16.025904330053,13.6825045857004,7.4236555337641,2.65490276679926,9.22566417388929,10.883648050731,10.5618844663303,7.08724542913855,10.4527950300935,6.97756391554197,5.81653967164009,10.6949213515416,5.68866164284469,1.05418608574999,5.15677716240934,8.5109901438447,11.1637878299412,16.6872702079753,13.7175702420219,11.5271151867478,14.8046118609719,12.9993726275676,14.9187825066154,5.16277757740163,14.6164128896036,4.19003956304428,3.62749756471256,7.42736362801165,5.12659861889325,5.96861720015682,4.76008609260678,5.53813589596716,9.45669040253599,5.80960994712699,10.7321171340876,6.48180845793991,4.89757988212197,5.33107488111998,6.86334519619568,15.8079939894285,12.0358248998346,15.6165970398999,3.81868247206045,8.69923982348122,7.1161813494397,7.77638453916969,8.78170843260769,11.3548533148012,5.66430254816247,6.69492991375221,3.92633912976044,4.79575401179634,3.72803587852155,100.337343085786,14.8021380583539,14.5603471602246,13.0282296190512,16.4032975816719,13.3475339137715,13.6134396829075,12.7600297147071,17.0920731413909,13.5287107662563,35.4276907697175,6.63623353319174,10.5417111950885,10.0656738021531,6.75588279484534,7.51912121803422,8.54329825559439,8.17329056735788,9.59981926634752,7.37055084621478,9.22102360525498,8.67105192176829,9.74578807397524,11.4492091551992,10.6357980985228,4.0811469050738,4.66170502085536,2.15313255862742,3.35769232728157,3.86379188064381,5.81815673898664,7.69236821922513,3.64426244434412,3.00943262421218,10.7302850097243,5.9842280745933,10.3121192419091,8.42080593484069,15.7568979547248,12.0863023582352,9.45031500324528,9.45674526770863,9.5159905886683,5.69536342927002,14.6340160093689,10.7736715818278,10.5854835567563,8.75184181445858,9.4325923182592,8.82448840560068,8.22312892865976,8.44743734679466,5.13470735346904,6.06473308233114,4.56262739802432,7.1678009726709,6.74218853783153,7.10679191694049,7.75378830900779,9.0495801343784,9.50251472747815,7.90927803901191,6.59337441285291,6.32955356577908,6.51451579532289,6.92155644021416,5.48403236878838,7.1219744149841,6.11710972699649,6.8537832392258,5.67076715905595,4.99832451731901,8.28405094459757,7.2948495315506,6.64356101495375,6.30428687203606,5.72923460437565,7.2820315357404,6.17301155139652,11.2414760072076,6.55008503647143,6.66100267549725,4.3996316375834,5.7353768971074,5.10109238364927
|short_description=p1@Vhl
}}
}}

Latest revision as of 11:35, 26 September 2015

Short description:p1@Vhl
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Vhl_5end
Coexpression cluster:MCL_coexpression_mm9:1410
Association with transcript: 0bp_to_NM_009507, uc009dha.1_5end
EntrezGene:Vhl
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Vhl

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.34
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I38.17
CD326+ enterocyte, pool2.CNhs13197.11849-124I414.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.21
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.28
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E912.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.57
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.93
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.89
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.61
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.41
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A322.03
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I910.19
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.65
GP2+ M cell, pool1.CNhs13228.11845-124H914.36
GP2+ M cell, pool2.CNhs13231.11846-124I19.91
GP2+ M cell, pool3.CNhs13240.11847-124I26.90
Ileum epithelium, pool1.CNhs13199.10252-104B98.17
Ileum epithelium, pool2.CNhs13232.10253-104C17.81
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F511.55
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G825.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H128.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H317.80
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G930.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H227.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H434.47
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.79
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.49
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.34
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.08
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.92
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.43
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.28
Mouse Granule cells, donor1.CNhs12131.11713-123C324.08
Mouse Granule cells, donor2.CNhs12357.11731-123E322.75
Mouse Granule cells, donor3.CNhs12108.11636-122C718.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.49
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C817.68
Mouse Microglia, donor2.CNhs12634.11736-123E818.44
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F521.33
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D921.87
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D221.44
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F223.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.68
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.30
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D625.63
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.94
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.76
Mouse Schwann, donor1.CNhs12507.11728-123D96.06
Mouse Schwann, donor2.CNhs12573.11746-123F93.55
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.25
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.19
accessory axillary lymph node, adult.CNhs10475.1063-29H96.73
adrenal gland, adult.CNhs10508.49-24D75.64
adrenal gland, embryo E14.CNhs11038.406-44C59.37
adrenal gland, embryo E16.CNhs11004.1254-43D612.79
adrenal gland, embryo E17.CNhs11043.1263-45I19.46
adrenal gland, embryo E18.CNhs11026.1262-18F510.55
adrenal gland, neonate N00.CNhs11191.1311-23C19.05
adrenal gland, neonate N25.CNhs11223.1377-27I38.92
amnion, adult pregnant day17.5.CNhs10488.583-22A810.38
aorta, adult.CNhs10498.46-23H13.76
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F54.21
bone (os femoris), neonate N16.CNhs11225.1525-43A65.30
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B210.83
cerebellum, neonate N30.CNhs11135.1395-42I211.10
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.98
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.20
corpora quadrigemina, adult.CNhs10501.16-22A46.29
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F113.82
cortex, adult.CNhs10473.12-14D59.39
cortex, neonate N30.CNhs11107.1392-42F210.74
diencephalon, adult.CNhs10482.20-12F210.60
diencephalon, neonate N30.CNhs11201.1388-42B28.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.71
epididymis, adult.CNhs10490.58-23B27.33
eyeball, adult.CNhs10484.31-12G46.73
eyeball, embryo E12.CNhs11016.345-16C612.10
eyeball, embryo E14.CNhs10521.399-16E212.18
eyeball, embryo E15.CNhs10593.426-16C912.24
eyeball, embryo E17.CNhs11023.1261-18D411.60
eyeball, neonate N00.CNhs11207.633-15C613.06
eyeball, neonate N01.CNhs11140.1532-43E711.02
eyeball, neonate N02.CNhs11205.1551-44G811.06
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E29.27
forelimb, embryo E12.CNhs10600.359-14H28.89
forelimb, embryo E13.CNhs10589.384-1E210.73
forelimb, embryo E14.CNhs10577.413-26A814.47
forelimb, embryo E15.CNhs11007.437-20E711.12
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B58.23
gonad, embryo E13.CNhs11044.1564-45I611.94
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.78
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D510.23
heart, embryo E11.CNhs10586.331-24E98.91
heart, embryo E12.CNhs11015.353-12F59.15
heart, embryo E13.CNhs11013.376-3I99.54
heart, embryo E14.CNhs10597.403-26D49.47
heart, embryo E15.CNhs11017.431-16C89.64
heart, embryo E16.CNhs11021.457-17C68.79
heart, embryo E17.CNhs11025.479-18E57.21
heart, embryo E18.CNhs11030.1283-20G36.98
heart, neonate N00.CNhs11213.639-21E38.06
heart, neonate N03.CNhs11221.1349-25I23.78
heart, neonate N10.CNhs11118.749-24G13.45
heart, neonate N16.CNhs11209.782-15G15.03
heart, neonate N20.CNhs11127.821-26I65.26
heart, neonate N25.CNhs11196.1351-25D35.27
heart, neonate N30.CNhs11202.1390-42D23.76
hippocampus, adult.CNhs10478.13-16E89.04
hippocampus, neonate N00.CNhs11228.627-43G112.45
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A35.29
intestine, embryo E12.CNhs11019.1251-16I510.66
intestine, embryo E13.CNhs11010.381-16D510.22
intestine, embryo E15.CNhs10602.976-16D88.76
intestine, embryo E16.CNhs10585.463-22H46.66
intestine, embryo E17.CNhs10582.482-18D36.45
intestine, embryo E18.CNhs10526.1289-20F77.61
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E910.05
intestine, neonate N06.CNhs11102.688-20B89.30
intestine, neonate N07.CNhs11095.720-20F26.76
intestine, neonate N10.CNhs11098.755-23A56.82
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E38.00
intestine, neonate N30.CNhs11131.1384-42G15.18
kidney, embryo E14.CNhs10606.411-4I912.33
kidney, embryo E15.CNhs10997.434-16F88.91
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I28.96
kidney, embryo E18.CNhs11001.1288-20C78.73
kidney, neonate N00.CNhs11214.646-21G77.29
kidney, neonate N10.CNhs11206.758-6D59.49
kidney, neonate N20.CNhs11113.832-19I16.94
kidney, neonate N25.CNhs11122.1353-25F39.11
kidney, neonate N30.CNhs11203.1385-42H16.91
liver, adult pregnant day01.CNhs10466.508-5B27.11
liver, embryo E12.CNhs10601.355-15F84.84
liver, embryo E13.CNhs10524.378-3H64.52
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F45.51
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H28.56
liver, neonate N10.CNhs11115.751-24B97.49
liver, neonate N20.CNhs11220.823-25A35.56
liver, neonate N25.CNhs11198.1368-26H15.74
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B16.65
lung, embryo E12.CNhs10522.354-16G211.18
lung, embryo E14.CNhs10604.404-26F87.17
lung, embryo E15.CNhs11020.432-17C57.64
lung, embryo E16.CNhs10998.458-17B65.87
lung, embryo E17.CNhs10605.480-44A67.04
lung, embryo E18.CNhs10583.1287-20I610.95
lung, neonate N00.CNhs11224.640-42C66.24
lung, neonate N06.CNhs11212.683-20E59.14
lung, neonate N07.CNhs11111.715-19A37.75
lung, neonate N10.CNhs11219.750-23E69.25
lung, neonate N20.CNhs11109.822-18A47.87
lung, neonate N25.CNhs11119.1359-25C77.43
lung, neonate N30.CNhs11133.1394-42H29.69
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.79
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C28.51
medulla oblongata, neonate N30.CNhs11200.1396-42A39.85
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.17
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I910.28
ovary, adult.CNhs10507.91-2I78.66
ovary, embryo E18.CNhs11040.505-44H716.03
ovary, neonate N00.CNhs11217.1299-22I413.68
oviduct, adult pregnant day01.CNhs10500.988-6G67.42
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F49.23
pancreas, embryo E15.CNhs11042.1556-45F210.88
pancreas, embryo E16.CNhs11003.460-26E510.56
pancreas, embryo E17.CNhs10599.1558-45G37.09
pancreas, embryo E18.CNhs10580.1535-43I710.45
pancreas, neonate N00.CNhs11105.645-26G96.98
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D810.69
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G88.51
pituitary gland, embryo E12.CNhs11018.346-16E611.16
pituitary gland, embryo E13.CNhs11009.370-44C716.69
pituitary gland, embryo E14.CNhs11037.398-44A513.72
pituitary gland, embryo E15.CNhs10592.427-16B911.53
pituitary gland, embryo E16.CNhs11036.449-43F614.80
pituitary gland, embryo E17.CNhs11039.1265-44F513.00
pituitary gland, neonate N00.CNhs11190.1308-22E914.92
placenta, adult pregnant day10.CNhs10472.539-13I75.16
placenta, adult pregnant day17.CNhs10464.577-18G314.62
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C33.63
skin, neonate N00.CNhs11124.650-25G47.43
skin, neonate N03.CNhs11215.662-22H35.13
skin, neonate N06.CNhs11097.693-20I55.97
skin, neonate N10.CNhs11108.762-6C44.76
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C99.46
spleen, adult.CNhs10465.25-2G25.81
spleen, embryo E16.CNhs11035.461-43C110.73
spleen, embryo E18.CNhs11011.1271-21F26.48
spleen, neonate N10.CNhs11116.752-24D14.90
spleen, neonate N20.CNhs11112.824-19H15.33
spleen, neonate N25.CNhs11099.1354-25G36.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C615.81
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C912.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D315.62
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E38.70
stomach, embryo E15.CNhs10603.1252-16G87.12
stomach, embryo E16.CNhs11022.459-17D47.78
stomach, embryo E17.CNhs11006.1035-18D58.78
stomach, embryo E18.CNhs10999.1286-20C611.35
stomach, neonate N03.CNhs11193.1340-24B85.66
stomach, neonate N07.CNhs11210.718-18A96.69
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I14.80
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G5100.34
testis, embryo E13.CNhs11031.389-23F514.80
testis, embryo E15.CNhs11034.443-27C514.56
testis, embryo E16.CNhs11033.470-26G513.03
testis, embryo E17.CNhs11029.486-18I516.40
testis, embryo E18.CNhs11027.503-18G513.35
testis, neonate N00.CNhs11189.1300-22B713.61
testis, neonate N07.CNhs11222.726-26I412.76
testis, neonate N10.CNhs11204.763-44D917.09
testis, neonate N20.CNhs11110.839-18H313.53
testis, neonate N30.CNhs11130.1391-42E235.43
thymus, adult.CNhs10471.38-12B56.64
thymus, embryo E14.CNhs11041.402-44I410.54
thymus, embryo E15.CNhs11005.430-45I210.07
thymus, embryo E16.CNhs11002.456-26C56.76
thymus, embryo E17.CNhs10581.478-18C17.52
thymus, embryo E18.CNhs10595.1273-19G48.54
thymus, neonate N02.CNhs11181.1541-43F88.17
thymus, neonate N03.CNhs11137.2104-43C79.60
thymus, neonate N06.CNhs11197.681-26C47.37
thymus, neonate N07.CNhs11211.713-19D39.22
thymus, neonate N10.CNhs11194.748-24E48.67
thymus, neonate N20.CNhs11186.820-7A29.75
thymus, neonate N25.CNhs11125.1362-25G711.45
thymus, neonate N30.CNhs11132.1393-42G210.64
tongue, adult.CNhs10499.32-1B44.08
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.15
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.36
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F55.82
uterus, adult.CNhs10509.92-27E57.69
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I814.63
whole body, embryo E12.CNhs10587.857-27C910.77
whole body, embryo E13.CNhs10512.372-23H210.59
whole body, embryo E14.5.CNhs10578.420-27D28.75
whole body, embryo E14.CNhs10519.395-14B19.43
whole body, embryo E16.CNhs10514.453-14F28.82
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.17
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.50
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.91
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.12
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.28
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.28
whole body, embryo E17.5.CNhs10513.490-9F96.17
whole body, embryo E17.CNhs10517.475-3I511.24
whole body, embryo E18.CNhs10516.493-3B36.55
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B45.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.70e-1323
neuroblast (sensu Vertebrata)6.70e-1323
ectodermal cell5.08e-1044
neurectodermal cell5.08e-1044
neuron7.99e-1033
neuronal stem cell7.99e-1033
neuroblast7.99e-1033
electrically signaling cell7.99e-1033
neural cell1.41e-0943
electrically responsive cell1.61e-0739
electrically active cell1.61e-0739

Uber anatomy
Ontology termp-valuen
central nervous system2.88e-1473
regional part of nervous system9.74e-1454
neurectoderm4.35e-1364
neural plate4.35e-1364
presumptive neural plate4.35e-1364
nervous system5.33e-1375
neural tube8.69e-1352
neural rod8.69e-1352
future spinal cord8.69e-1352
neural keel8.69e-1352
pre-chordal neural plate3.29e-1049
brain3.39e-1047
future brain3.39e-1047
regional part of brain4.48e-1046
ectoderm-derived structure5.33e-1095
ectoderm5.33e-1095
presumptive ectoderm5.33e-1095
gray matter6.41e-1034
ecto-epithelium7.80e-1073
regional part of forebrain1.08e-0939
forebrain1.08e-0939
future forebrain1.08e-0939
anterior neural tube3.69e-0940
structure with developmental contribution from neural crest6.10e-0992
brain grey matter2.92e-0729
regional part of telencephalon2.92e-0729
telencephalon2.92e-0729
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