FFCP PHASE1:Mm9::chr7:135019147..135019187,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:135019147..135019187,-
|short_description=p3@Zfp668
|description=CAGE_peak_3_at_Zfp668_5end
|association_with_transcript=0bp_to_ENSMUST00000106261,ENSMUST0...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=244219 | |EntrezGene=244219 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K2R5,D3Z404 | |UniProt=Q8K2R5,D3Z404 | ||
|association_with_transcript=0bp_to_ENSMUST00000106261,ENSMUST00000144721_5end | |||
|cluster_id=chr7:135019147..135019187,- | |||
|description=CAGE_peak_3_at_Zfp668_5end | |||
|id=chr7:135019147..135019187,- | |||
|ontology_enrichment_celltype=CL:0000540!6.85e-17!33;CL:0000047!6.85e-17!33;CL:0000031!6.85e-17!33;CL:0000404!6.85e-17!33;CL:0002319!3.80e-15!43;CL:0000221!5.91e-15!44;CL:0000133!5.91e-15!44;CL:0000117!1.02e-14!23;CL:0000337!1.02e-14!23;CL:0000393!8.04e-14!39;CL:0000211!8.04e-14!39;CL:0000055!5.27e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.12e-18,33;CL:0000047,1.12e-18,33;CL:0000031,1.12e-18,33;CL:0000404,1.12e-18,33;CL:0000117,2.98e-16,23;CL:0000337,2.98e-16,23;CL:0002319,1.64e-15,43;CL:0000221,2.57e-15,44;CL:0000133,2.57e-15,44;CL:0000393,1.51e-14,39;CL:0000211,1.51e-14,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.49e-26!73;UBERON:0005743!4.49e-26!73;UBERON:0000073!9.19e-26!75;UBERON:0001016!9.19e-26!75;UBERON:0004121!5.62e-20!102;UBERON:0000924!5.62e-20!102;UBERON:0006601!5.62e-20!102;UBERON:0002346!1.91e-19!71;UBERON:0003075!1.91e-19!71;UBERON:0007284!1.91e-19!71;UBERON:0001049!1.12e-18!52;UBERON:0005068!1.12e-18!52;UBERON:0006241!1.12e-18!52;UBERON:0007135!1.12e-18!52;UBERON:0000955!1.60e-17!50;UBERON:0006238!1.60e-17!50;UBERON:0002616!2.36e-17!49;UBERON:0000033!2.56e-17!63;UBERON:0003056!2.02e-16!49;UBERON:0002020!5.07e-16!34;UBERON:0003080!6.80e-15!40;UBERON:0002780!1.86e-14!39;UBERON:0001890!1.86e-14!39;UBERON:0006240!1.86e-14!39;UBERON:0002791!4.24e-13!29;UBERON:0003528!4.24e-13!29;UBERON:0001893!4.24e-13!29;UBERON:0000153!5.35e-13!94;UBERON:0007811!1.16e-11!86;UBERON:0000956!1.19e-09!21;UBERON:0001869!1.19e-09!21;UBERON:0000203!1.19e-09!21;UBERON:0002619!2.39e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.50e-28,73;UBERON:0001016,1.18e-27,75;UBERON:0004121,9.39e-24,95;UBERON:0000924,9.39e-24,95;UBERON:0006601,9.39e-24,95;UBERON:0002346,3.80e-23,64;UBERON:0003075,3.80e-23,64;UBERON:0007284,3.80e-23,64;UBERON:0000073,1.25e-21,54;UBERON:0001049,9.26e-20,52;UBERON:0005068,9.26e-20,52;UBERON:0006241,9.26e-20,52;UBERON:0007135,9.26e-20,52;UBERON:0010371,6.24e-19,73;UBERON:0003056,9.40e-18,49;UBERON:0000955,8.12e-17,47;UBERON:0006238,8.12e-17,47;UBERON:0002020,9.52e-17,34;UBERON:0002616,1.25e-16,46;UBERON:0003080,6.11e-16,40;UBERON:0002780,1.87e-15,39;UBERON:0001890,1.87e-15,39;UBERON:0006240,1.87e-15,39;UBERON:0003528,1.59e-13,29;UBERON:0002791,1.59e-13,29;UBERON:0001893,1.59e-13,29;UBERON:0010314,2.52e-13,92;UBERON:0000956,1.06e-09,21;UBERON:0001869,1.06e-09,21;UBERON:0000203,1.06e-09,21;UBERON:0002619,3.43e-07,17 | |||
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| ||
|short_description=p3@Zfp668 | |||
}} | }} |
Latest revision as of 23:09, 25 September 2015
Short description: | p3@Zfp668 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Zfp668_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000106261, ENSMUST00000144721_5end |
EntrezGene: | Zfp668 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.12e-18 | 33 |
neuronal stem cell | 1.12e-18 | 33 |
neuroblast | 1.12e-18 | 33 |
electrically signaling cell | 1.12e-18 | 33 |
CNS neuron (sensu Vertebrata) | 2.98e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.98e-16 | 23 |
neural cell | 1.64e-15 | 43 |
ectodermal cell | 2.57e-15 | 44 |
neurectodermal cell | 2.57e-15 | 44 |
electrically responsive cell | 1.51e-14 | 39 |
electrically active cell | 1.51e-14 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.50e-28 | 73 |
nervous system | 1.18e-27 | 75 |
ectoderm-derived structure | 9.39e-24 | 95 |
ectoderm | 9.39e-24 | 95 |
presumptive ectoderm | 9.39e-24 | 95 |
neurectoderm | 3.80e-23 | 64 |
neural plate | 3.80e-23 | 64 |
presumptive neural plate | 3.80e-23 | 64 |
regional part of nervous system | 1.25e-21 | 54 |
neural tube | 9.26e-20 | 52 |
neural rod | 9.26e-20 | 52 |
future spinal cord | 9.26e-20 | 52 |
neural keel | 9.26e-20 | 52 |
ecto-epithelium | 6.24e-19 | 73 |
pre-chordal neural plate | 9.40e-18 | 49 |
brain | 8.12e-17 | 47 |
future brain | 8.12e-17 | 47 |
gray matter | 9.52e-17 | 34 |
regional part of brain | 1.25e-16 | 46 |
anterior neural tube | 6.11e-16 | 40 |
regional part of forebrain | 1.87e-15 | 39 |
forebrain | 1.87e-15 | 39 |
future forebrain | 1.87e-15 | 39 |
brain grey matter | 1.59e-13 | 29 |
regional part of telencephalon | 1.59e-13 | 29 |
telencephalon | 1.59e-13 | 29 |
structure with developmental contribution from neural crest | 2.52e-13 | 92 |
cerebral cortex | 1.06e-09 | 21 |
cerebral hemisphere | 1.06e-09 | 21 |
pallium | 1.06e-09 | 21 |
regional part of cerebral cortex | 3.43e-07 | 17 |