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FFCP PHASE1:Mm9::chr9:106356265..106356276,+: Difference between revisions

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(Created page with "{{FFCP |id=chr9:106356265..106356276,+ |short_description=p4@Pcbp4 |description=CAGE_peak_4_at_Pcbp4_5end |association_with_transcript=77bp_to_ENSMUST00000024260,uc009rjt....")
 
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{{FFCP
{{FFCP
|id=chr9:106356265..106356276,+
|DHSsupport=NA
|short_description=p4@Pcbp4
|DPIdataset=NA
|description=CAGE_peak_4_at_Pcbp4_5end
|association_with_transcript=77bp_to_ENSMUST00000024260,uc009rjt.2_5end
|EntrezGene=59092
|EntrezGene=59092
|HGNC=
|HGNC=
|MCL_coexpression_id=1773
|TSSclassifier=NA
|UniProt=P57724,Q8BP63
|UniProt=P57724,Q8BP63
|association_with_transcript=77bp_to_ENSMUST00000024260,uc009rjt.2_5end
|cluster_id=chr9:106356265..106356276,+
|description=CAGE_peak_4_at_Pcbp4_5end
|id=chr9:106356265..106356276,+
|ontology_enrichment_celltype=CL:0000221!1.84e-26!44;CL:0000133!1.84e-26!44;CL:0002319!9.79e-26!43;CL:0000055!2.74e-22!50;CL:0000540!4.45e-19!33;CL:0000047!4.45e-19!33;CL:0000031!4.45e-19!33;CL:0000404!4.45e-19!33;CL:0000393!6.09e-17!39;CL:0000211!6.09e-17!39;CL:0000117!4.83e-14!23;CL:0000337!4.83e-14!23;CL:0002321!7.86e-12!70;CL:0000220!7.86e-12!70;CL:0000333!1.98e-07!10;CL:0000095!1.98e-07!10;CL:0000243!1.98e-07!10;CL:0000123!1.98e-07!10;CL:0000125!1.98e-07!10;CL:0000030!1.98e-07!10;CL:0000339!1.98e-07!10
|ontology_enrichment_celltype_v019_2=CL:0000221,2.70e-33,44;CL:0000133,2.70e-33,44;CL:0002319,2.28e-32,43;CL:0000540,7.14e-24,33;CL:0000047,7.14e-24,33;CL:0000031,7.14e-24,33;CL:0000404,7.14e-24,33;CL:0000393,1.08e-18,39;CL:0000211,1.08e-18,39;CL:0000117,1.88e-17,23;CL:0000337,1.88e-17,23;CL:0002321,1.64e-15,70;CL:0000333,4.89e-09,10;CL:0000095,4.89e-09,10;CL:0000243,4.89e-09,10;CL:0000123,4.89e-09,10;CL:0000125,4.89e-09,10;CL:0000030,4.89e-09,10;CL:0000339,4.89e-09,10;CL:0002453,2.61e-07,8;CL:0000107,9.30e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!6.91e-28!75;UBERON:0001016!6.91e-28!75;UBERON:0001017!2.43e-26!73;UBERON:0005743!2.43e-26!73;UBERON:0004121!3.38e-25!102;UBERON:0000924!3.38e-25!102;UBERON:0006601!3.38e-25!102;UBERON:0002346!1.28e-17!71;UBERON:0003075!1.28e-17!71;UBERON:0007284!1.28e-17!71;UBERON:0000033!9.08e-17!63;UBERON:0001049!6.09e-15!52;UBERON:0005068!6.09e-15!52;UBERON:0006241!6.09e-15!52;UBERON:0007135!6.09e-15!52;UBERON:0003056!4.67e-14!49;UBERON:0002616!8.60e-14!49;UBERON:0000955!2.13e-13!50;UBERON:0006238!2.13e-13!50;UBERON:0002020!3.28e-12!34;UBERON:0003080!7.58e-11!40;UBERON:0002780!1.44e-10!39;UBERON:0001890!1.44e-10!39;UBERON:0006240!1.44e-10!39;UBERON:0002791!5.11e-10!29;UBERON:0003528!5.11e-10!29;UBERON:0001893!5.11e-10!29;UBERON:0000153!2.40e-07!94;UBERON:0000010!5.70e-07!11;UBERON:0007811!6.66e-07!86;UBERON:0000025!6.67e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.25e-30,75;UBERON:0004121,6.69e-30,95;UBERON:0000924,6.69e-30,95;UBERON:0006601,6.69e-30,95;UBERON:0001017,1.68e-28,73;UBERON:0010314,5.66e-21,92;UBERON:0002346,9.18e-21,64;UBERON:0003075,9.18e-21,64;UBERON:0007284,9.18e-21,64;UBERON:0010371,9.29e-19,73;UBERON:0000073,2.79e-16,54;UBERON:0001049,6.23e-15,52;UBERON:0005068,6.23e-15,52;UBERON:0006241,6.23e-15,52;UBERON:0007135,6.23e-15,52;UBERON:0003056,5.36e-14,49;UBERON:0002020,7.48e-13,34;UBERON:0002616,7.78e-12,46;UBERON:0000955,2.65e-11,47;UBERON:0006238,2.65e-11,47;UBERON:0003080,2.38e-10,40;UBERON:0003528,3.58e-10,29;UBERON:0002791,3.58e-10,29;UBERON:0001893,3.58e-10,29;UBERON:0002780,5.19e-10,39;UBERON:0001890,5.19e-10,39;UBERON:0006240,5.19e-10,39;UBERON:0000010,1.87e-08,11;UBERON:0002410,9.30e-07,9
|phase1_expression=4.64431656603902,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0.61506478758457,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,1.1330713617802,0.608261587317087,0.550640256485045,1.56478268869608,15.4797861030117,9.44650585758229,8.74934545834275,5.45947044338914,10.062679505548,0,0,0,0.771778308107841,0.573066879877513,0.515672092277442,9.1042407386819,9.52183762689659,9.50747105259269,3.04960078862219,3.55717918444456,0.449949858640699,0,0,6.89080254192331,16.1371688235053,6.84351441235953,7.02030879324791,6.94072372459561,5.42736870367227,4.8591079009355,8.08439274818697,8.81778333367775,9.19218786610021,4.40463523997555,4.72443150915195,3.22573719838111,5.53922408466814,6.86157327018072,7.8137005583514,5.02529398202486,3.37657566019008,3.66715794664344,3.53554302568401,2.84743361598206,2.05039390407831,16.3568577599678,9.06858721281426,0.289864488701678,0,0,0,0,0,0.561777680527007,1.02258193546835,0.519572009205738,0,8.30976176682415,2.56652954828636,0,0,0.216491041011214,1.01343946190039,0.505524445014783,0.11418387971906,0,0,0.867426633830679,0.608930956624282,0.230615497256059,0.904335843315735,0.587943535678524,0.125666591329675,0,0.578397427679647,0,0.808834249737046,0.220841518460394,0,0,0.585561594023094,1.8850203613211,0,0.11981512450592,0,0,2.09706895166752,1.83000241127451,3.01570445070875,0.869121600961382,0.511430914660661,0.83115217823824,3.0825839982874,1.01839363850316,0.248813941220186,0,0.420883711772948,2.86264974517948,5.28774840196988,3.78130472591233,3.31550599238573,4.62648194229029,4.61209393025459,3.84177070694888,1.81092359517311,1.72454394346274,1.51284864134255,0.879755620819744,2.19195732427575,1.39023624612799,1.0447564995665,0.61734640922383,0.59710280045548,0,0,0,3.72826390563903,2.81431271977315,2.70093092191522,1.89395788468168,0.787056926989615,1.07986979021165,2.32533944750408,4.29237442239391,2.21854150497622,1.97471819896177,2.13417703302824,2.26992666728396,1.16959989940266,1.09775057645525,2.41571553768669,1.47202963994889,2.77842453424068,0,0.264450566663544,2.55945900642281,0.232236671860439,1.54640953586512,0,0.667134131534611,0.760902504450237,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,0,0,0,1.89667900953082,1.25673363870702,2.25415471346161,0.407302655690628,0.775809948670503,1.05203729835478,0.316182685621286,0.147610147979602,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,0,2.84237117655727,2.28150967018836,1.01847051465113,0,1.34005005953453,0.238043640886014,0.585400943573396,0.315270288212382,1.10732344824387,0.956728611944923,0,0.690739927463582,0.289298117163023,0,0,0,0,3.37156238974363,1.87538698547525,0.983609672260053,1.26235463602186,4.10160685241134,3.12350995437311,4.52389135238878,5.9742199488138,7.5751549188014,4.24614796183249,2.83367491172426,2.92255857911312,3.16230222357219,0.321321316421807,0.141940085208269,0.890328018336276,1.46598263418218,0.329940245945071,1.32745138339963,0.728341908464944,0.604647113929502,0.565815239267694,0.590603785761546,0.614870295887855,1.03371317267288,0.727067458955011,0.712994756769443,0,1.05418608574999,0,0,3.24109969256358,3.62204314591713,1.28602221018955,0.532020700926821,1.96205699362278,0.987294123612726,1.8267896946876,0.23467170806371,0,0.220528398054962,0.49465875882444,1.29171541356724,0.542816324353403,0.716234064018819,0.164140899745061,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,2.37251995185852,1.01659733563424,0.432021363287205,0.836353184057875,0.655087691238533,0.269728692769641,0.661227645802687,0.785267825952089,0.518459893167171,0,0,0.299033092087958,0.66183396182839,0.194451188344048,0,0.506868376472335,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.810900861160657,0.616265742988964,0.129920822977795,0.358053391334963,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.453460767230423,0.665957860122194,1.88399098879899,0.335769232728157,0.579568782096571,0.375364950902364,0.36630324853453,0.214368379079066,0,1.6942555278512,0.460325236507177,2.86447756719698,1.03111909406213,0.685082519770642,1.5107877947794,0.675022500231806,0.45032120322422,2.26571204492102,2.5888015587591,3.32119512269365,1.99512436700516,2.21953687480374,0.972426868273176,1.67690530102386,1.65459157605013,1.77797382241292,0.618105171716683,1.92551525755089,1.51618327058278,1.01391719956096,1.32038438970253,1.40462261204824,1.53660365771686,1.32101578597911,1.42888107384922,1.97003354106254,1.54327376370964,0.824171801606613,0.735994600671987,1.02860775715625,0.887379030796687,0.953744759789284,0.581385666529314,1.2234219453993,1.35383372626682,0.914639864363863,1.57841826862706,1.22223702461276,0.561142271657738,0.593175090620871,1.57607171800902,1.22769312950907,2.47898945897546,1.15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|phase1_expression=4.64431656603902,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0.61506478758457,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,1.1330713617802,0.608261587317087,0.550640256485045,1.56478268869608,15.4797861030117,9.44650585758229,8.74934545834275,5.45947044338914,10.062679505548,0,0,0,0.771778308107841,0.573066879877513,0.515672092277442,9.1042407386819,9.52183762689659,9.50747105259269,3.04960078862219,3.55717918444456,0.449949858640699,0,0,6.89080254192331,16.1371688235053,6.84351441235953,7.02030879324791,6.94072372459561,5.42736870367227,4.8591079009355,8.08439274818697,8.81778333367775,9.19218786610021,4.40463523997555,4.72443150915195,3.22573719838111,5.53922408466814,6.86157327018072,7.8137005583514,5.02529398202486,3.37657566019008,3.66715794664344,3.53554302568401,2.84743361598206,2.05039390407831,16.3568577599678,9.06858721281426,0.289864488701678,0,0,0,0,0,0.561777680527007,1.02258193546835,0.519572009205738,0,8.30976176682415,2.56652954828636,0,0,0.216491041011214,1.01343946190039,0.505524445014783,0.11418387971906,0,0,0.867426633830679,0.608930956624282,0.230615497256059,0.904335843315735,0.587943535678524,0.125666591329675,0,0.578397427679647,0,0.808834249737046,0.220841518460394,0,0,0.585561594023094,1.8850203613211,0,0.11981512450592,0,0,2.09706895166752,1.83000241127451,3.01570445070875,0.869121600961382,0.511430914660661,0.83115217823824,3.0825839982874,1.01839363850316,0.248813941220186,0,0.420883711772948,2.86264974517948,5.28774840196988,3.78130472591233,3.31550599238573,4.62648194229029,4.61209393025459,3.84177070694888,1.81092359517311,1.72454394346274,1.51284864134255,0.879755620819744,2.19195732427575,1.39023624612799,1.0447564995665,0.61734640922383,0.59710280045548,0,0,0,3.72826390563903,2.81431271977315,2.70093092191522,1.89395788468168,0.787056926989615,1.07986979021165,2.32533944750408,4.29237442239391,2.21854150497622,1.97471819896177,2.13417703302824,2.26992666728396,1.16959989940266,1.09775057645525,2.41571553768669,1.47202963994889,2.77842453424068,0,0.264450566663544,2.55945900642281,0.232236671860439,1.54640953586512,0,0.667134131534611,0.760902504450237,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,0,0,0,1.89667900953082,1.25673363870702,2.25415471346161,0.407302655690628,0.775809948670503,1.05203729835478,0.316182685621286,0.147610147979602,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,0,2.84237117655727,2.28150967018836,1.01847051465113,0,1.34005005953453,0.238043640886014,0.585400943573396,0.315270288212382,1.10732344824387,0.956728611944923,0,0.690739927463582,0.289298117163023,0,0,0,0,3.37156238974363,1.87538698547525,0.983609672260053,1.26235463602186,4.10160685241134,3.12350995437311,4.52389135238878,5.9742199488138,7.5751549188014,4.24614796183249,2.83367491172426,2.92255857911312,3.16230222357219,0.321321316421807,0.141940085208269,0.890328018336276,1.46598263418218,0.329940245945071,1.32745138339963,0.728341908464944,0.604647113929502,0.565815239267694,0.590603785761546,0.614870295887855,1.03371317267288,0.727067458955011,0.712994756769443,0,1.05418608574999,0,0,3.24109969256358,3.62204314591713,1.28602221018955,0.532020700926821,1.96205699362278,0.987294123612726,1.8267896946876,0.23467170806371,0,0.220528398054962,0.49465875882444,1.29171541356724,0.542816324353403,0.716234064018819,0.164140899745061,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,2.37251995185852,1.01659733563424,0.432021363287205,0.836353184057875,0.655087691238533,0.269728692769641,0.661227645802687,0.785267825952089,0.518459893167171,0,0,0.299033092087958,0.66183396182839,0.194451188344048,0,0.506868376472335,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.810900861160657,0.616265742988964,0.129920822977795,0.358053391334963,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.453460767230423,0.665957860122194,1.88399098879899,0.335769232728157,0.579568782096571,0.375364950902364,0.36630324853453,0.214368379079066,0,1.6942555278512,0.460325236507177,2.86447756719698,1.03111909406213,0.685082519770642,1.5107877947794,0.675022500231806,0.45032120322422,2.26571204492102,2.5888015587591,3.32119512269365,1.99512436700516,2.21953687480374,0.972426868273176,1.67690530102386,1.65459157605013,1.77797382241292,0.618105171716683,1.92551525755089,1.51618327058278,1.01391719956096,1.32038438970253,1.40462261204824,1.53660365771686,1.32101578597911,1.42888107384922,1.97003354106254,1.54327376370964,0.824171801606613,0.735994600671987,1.02860775715625,0.887379030796687,0.953744759789284,0.581385666529314,1.2234219453993,1.35383372626682,0.914639864363863,1.57841826862706,1.22223702461276,0.561142271657738,0.593175090620871,1.57607171800902,1.22769312950907,2.47898945897546,1.15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|short_description=p4@Pcbp4
}}
}}

Latest revision as of 02:55, 26 September 2015

Short description:p4@Pcbp4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Pcbp4_5end
Coexpression cluster:MCL_coexpression_mm9:1773
Association with transcript: 77bp_to_ENSMUST00000024260, uc009rjt.2_5end
EntrezGene:Pcbp4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Pcbp4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.48
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.45
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C39.10
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E816.14
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.54
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D916.36
Mouse Schwann, donor2.CNhs12573.11746-123F99.07
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.31
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C62.86
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C64.63
eyeball, neonate N01.CNhs11140.1532-43E74.61
eyeball, neonate N02.CNhs11205.1551-44G83.84
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G34.29
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G12.78
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.97
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C73.62
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I83.32
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B41.16





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system2.25e-3075
ectoderm-derived structure6.69e-3095
ectoderm6.69e-3095
presumptive ectoderm6.69e-3095
central nervous system1.68e-2873
structure with developmental contribution from neural crest5.66e-2192
neurectoderm9.18e-2164
neural plate9.18e-2164
presumptive neural plate9.18e-2164
ecto-epithelium9.29e-1973
regional part of nervous system2.79e-1654
neural tube6.23e-1552
neural rod6.23e-1552
future spinal cord6.23e-1552
neural keel6.23e-1552
pre-chordal neural plate5.36e-1449
gray matter7.48e-1334
regional part of brain7.78e-1246
brain2.65e-1147
future brain2.65e-1147
anterior neural tube2.38e-1040
brain grey matter3.58e-1029
regional part of telencephalon3.58e-1029
telencephalon3.58e-1029
regional part of forebrain5.19e-1039
forebrain5.19e-1039
future forebrain5.19e-1039
peripheral nervous system1.87e-0811
autonomic nervous system9.30e-079
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