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FFCP PHASE1:Mm9::chr9:55785981..55786009,-: Difference between revisions

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(Created page with "{{FFCP |id=chr9:55785981..55786009,- |short_description=p2@Scaper |description=CAGE_peak_2_at_Scaper_5end |association_with_transcript=-59bp_to_NM_001081341,uc009pso.1,uc0...")
 
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{{FFCP
{{FFCP
|id=chr9:55785981..55786009,-
|DHSsupport=NA
|short_description=p2@Scaper
|DPIdataset=NA
|description=CAGE_peak_2_at_Scaper_5end
|association_with_transcript=-59bp_to_NM_001081341,uc009pso.1,uc009psp.1,uc012gtu.1_5end
|EntrezGene=244891
|EntrezGene=244891
|HGNC=
|HGNC=
|MCL_coexpression_id=376
|TSSclassifier=NA
|UniProt=F8VQ70,Q501L8,Q8BIZ8
|UniProt=F8VQ70,Q501L8,Q8BIZ8
|association_with_transcript=-59bp_to_NM_001081341,uc009pso.1,uc009psp.1,uc012gtu.1_5end
|cluster_id=chr9:55785981..55786009,-
|description=CAGE_peak_2_at_Scaper_5end
|id=chr9:55785981..55786009,-
|ontology_enrichment_celltype=CL:0000117!6.72e-12!23;CL:0000337!6.72e-12!23;CL:0000540!1.13e-09!33;CL:0000047!1.13e-09!33;CL:0000031!1.13e-09!33;CL:0000404!1.13e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.78e-12,23;CL:0000337,2.78e-12,23;CL:0000540,1.44e-09,33;CL:0000047,1.44e-09,33;CL:0000031,1.44e-09,33;CL:0000404,1.44e-09,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.49e-19,64;UBERON:0003075,3.49e-19,64;UBERON:0007284,3.49e-19,64;UBERON:0000073,9.14e-19,54;UBERON:0001049,8.99e-18,52;UBERON:0005068,8.99e-18,52;UBERON:0006241,8.99e-18,52;UBERON:0007135,8.99e-18,52;UBERON:0010371,2.22e-17,73;UBERON:0001017,6.82e-17,73;UBERON:0004121,1.10e-16,95;UBERON:0000924,1.10e-16,95;UBERON:0006601,1.10e-16,95;UBERON:0003056,4.62e-16,49;UBERON:0001016,1.49e-15,75;UBERON:0000955,4.08e-15,47;UBERON:0006238,4.08e-15,47;UBERON:0010314,1.04e-14,92;UBERON:0002616,1.63e-14,46;UBERON:0002020,2.57e-14,34;UBERON:0003080,6.76e-14,40;UBERON:0002780,1.94e-13,39;UBERON:0001890,1.94e-13,39;UBERON:0006240,1.94e-13,39;UBERON:0003528,1.72e-11,29;UBERON:0002791,1.72e-11,29;UBERON:0001893,1.72e-11,29;UBERON:0000956,1.06e-08,21;UBERON:0001869,1.06e-08,21;UBERON:0000203,1.06e-08,21
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|phase1_expression=3.36312578920067,0,0.909998478779072,0,0.500895729946347,0.33575854382378,0.233612640595526,1.80772652818207,0.703943610758334,0.468129052643987,1.02730780935303,1.35612670292072,2.56801094896809,1.74840804837995,1.66554880907831,1.01237633694913,0,6.30924330716475,4.38766187538364,5.51706547337439,5.78294373027274,0.0992909512008853,0.783599367416806,0.319984845586813,0.68822784320151,0,0.86152399231815,0,0.570070258369122,0,0.221730510655305,0,0,0,0,0.498703936075477,1.22501613757421,2.09265815368454,0,1.57057123192139,2.35292595212406,1.36609096991689,0.971020706062307,0.377690453926732,0.202753862439029,0,2.34717403304412,0.872100625521786,0.219686182734472,0.58328969722285,0.839918529752175,0,2.34895648480831,1.45072428402269,3.02484419228218,0,0.573066879877513,0,13.9598357993122,12.6957835025288,12.0427966666174,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,7.25827286159344,5.67024940993101,4.83747411108179,5.14171771926846,3.75476519617743,9.30930074033651,9.10531974673246,6.43453150627015,4.40463523997555,4.08599481872601,4.76180253094355,15.1669230889723,16.742238779241,10.939180781692,0.558365998002762,3.37657566019008,4.43114918552749,10.0173719061047,12.6710795911202,15.6575534493252,0.302904773332736,0.453429360640713,0.579728977403356,0,0,0,0,0,1.12355536105401,0.170430322578058,0.259786004602869,1.06001872353102,1.97180787687353,1.28326477414318,0,0,0.216491041011214,0,0,1.02765491747154,5.95557132388495,1.92974780784272,0.346970653532272,0.608930956624282,0.691846491768175,0.904335843315735,2.82212897125692,1.0053327306374,3.21353458054686,0.144599356919912,0,0.808834249737046,1.76673214768315,0.969750506270444,0,7.31951992528868,5.86450779077674,0.510914110417183,1.1981512450592,0,0.508280908292259,4.6435098215495,4.57500602818627,15.4554853098823,5.21472960576829,4.09144731728529,4.98691306942944,4.2182728397617,1.62942982160506,1.7416975885413,3.53811861807145,2.73574412652416,0.780722657776222,2.5289231487682,2.16074555766419,3.76762044589288,6.66757691683013,8.32739181851524,6.8402258928602,8.79591460512653,0.646703978798527,2.45837904218165,2.63926686245923,1.09597866213787,0.556094498451196,1.74126083261083,1.23469281844766,1.19420560091096,0,0,0.568326998791185,1.44988040774851,1.64168241986767,1.62055855314913,1.89395788468168,0.787056926989615,2.62254091908543,0.697601834251224,1.60964040839772,4.32031766758527,2.63295759861569,2.95501435342371,3.81023404865522,2.19299981137998,3.29325172936576,2.95254121272818,4.41608891984667,9.57012895127345,0.330418782983798,0,0.639864751605702,1.16118335930219,1.9330119198314,1.4117846723634,2.00140239460383,2.09248188723815,0.474529061544512,1.31759163779209,2.26201687920243,1.1937388322469,1.75467678407208,0,0.864552199498777,0.995706366271836,0.569003702859245,1.14248512609729,0,1.62921062276251,1.16371492300575,3.71719845418688,1.70738650235495,1.32849133181642,2.04098346193787,1.1105744752962,0,0.667380422864376,0.589676985339609,0.449724224769707,0.811440485554012,0.72353147925725,0.25462585178142,0.575392274901621,0.486405680325106,0.274561413188081,4.31304619582064,1.48856379067401,0.624075346229121,0.757736633841335,0.179397413521912,0,2.03228509183265,1.51593129416388,0.162964976442026,1.18821560042632,0.469380496577004,2.1775813467436,0.714130922658041,2.34160377429359,3.62560831444239,2.6575762757853,2.87018583583477,0.81931657357869,1.72684981865896,1.3018415272336,0,0,0.491764273019036,0.275936746304732,1.9266070798535,3.7507739709505,0.491804836130026,0.757412781613119,1.89304931649754,0.780877488593277,1.93881057959519,0.716906393857656,2.00518806674155,1.98153571552183,1.61924280669958,1.46127928955656,1.97643888973262,8.03303291054518,1.84522110770749,0.712262414669021,2.93196526836437,1.64970122972535,0,0.971122544619926,0.604647113929502,1.69744571780308,0.885905678642318,1.53717573971964,1.55056975900933,1.09060118843252,0.712994756769443,1.58018378967908,0,0,4.76615448055303,2.70091641046965,0.388076051348264,3.21505552547388,4.78818630834139,6.0645397984704,5.10101963866575,1.2178597964584,1.87737366450968,1.69465656691056,1.10264199027481,1.81374878235628,2.74489525383039,1.80938774784468,1.19372344003136,1.14898629821543,0.291480836629851,3.8939313422207,0.683483523191411,1.03193433981611,0.370389054739423,0.753473828018764,1.0935538217682,1.14389086603261,2.03974115992626,2.51912614182584,1.79659965945751,0.954670618015114,0.632671987162271,1.01659733563424,1.29606408986162,1.67270636811575,1.52853794622324,0.674321731924103,1.81837602595739,0.523511883968059,1.16653475962614,1.86401793926078,29.8757257502621,1.49516546043979,1.82004339502807,1.36115831840833,0.904118764344118,1.520605129417,2.11243029562357,2.8644964665669,4.71867049915699,16.4277202161684,19.5860404255349,1.89606672376907,0.405450430580328,1.23253148597793,1.16928740680016,1.43221356533985,1.19208812868759,1.80293174279953,1.77227432609493,2.92802704849628,3.81034033274999,2.72230699869469,2.43644701849381,2.11666051608725,3.3894301632655,1.36038230169127,0.221985953374065,0.269141569828427,0.335769232728157,2.70465431645067,1.68914227906064,1.64836461840539,0.643105137237198,3.00943262421218,10.7302850097243,7.82552902062201,6.87474616127276,4.29632955859219,3.42541259885321,3.7769694869485,4.05013500139084,5.85417564191487,4.98456649882625,4.65984280576638,1.14166082342594,0.798049746802062,3.41467211508268,4.132814190161,2.72497111416377,1.10306105070008,3.11145418922261,2.47242068686673,2.24643446714271,5.05394423527595,2.02783439912192,3.77252682772152,3.09016974650612,2.11283002936069,2.98664438569189,2.85776214769844,4.05595140806994,5.20854895252004,2.88460130562315,3.38557516309114,3.08582327146874,3.19456451086807,2.86123427936785,3.0522747492789,3.3879376949519,2.11536519729191,3.47563148458268,2.36762740294059,2.30866993537965,2.80571135828869,3.2031454893527,2.85662998889134,1.63692417267876,2.16911577660352,4.05103883060397,3.99696924700713,4.21076895201735,2.14871054048298,1.91288332068843,0.882365676478062,1.15933917810211
|short_description=p2@Scaper
}}
}}

Latest revision as of 20:55, 26 September 2015

Short description:p2@Scaper
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Scaper_5end
Coexpression cluster:MCL_coexpression_mm9:376
Association with transcript: -59bp_to_NM_001081341, uc009pso.1, uc009psp.1, uc012gtu.1_5end
EntrezGene:Scaper
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Scaper

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.36
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.75
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.39
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C313.96
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.26
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.66
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H95.96
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F115.46
cortex, adult.CNhs10473.12-14D55.21
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C66.67
eyeball, neonate N01.CNhs11140.1532-43E78.33
eyeball, neonate N02.CNhs11205.1551-44G86.84
eyeball, neonate N16.CNhs11188.777-19A28.80
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C62.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E34.32
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G13.81
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D22.95
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G19.57
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G73.72
kidney, neonate N10.CNhs11206.758-6D51.71
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E53.63
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F66.06
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G42.74
skin, neonate N03.CNhs11215.662-22H31.81
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.80
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G529.88
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I42.86
testis, neonate N10.CNhs11204.763-44D94.72
testis, neonate N20.CNhs11110.839-18H316.43
testis, neonate N30.CNhs11130.1391-42E219.59
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C42.93
thymus, neonate N07.CNhs11211.713-19D33.81
thymus, neonate N10.CNhs11194.748-24E42.72
thymus, neonate N20.CNhs11186.820-7A22.44
thymus, neonate N25.CNhs11125.1362-25G72.12
thymus, neonate N30.CNhs11132.1393-42G23.39
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.78e-1223
neuroblast (sensu Vertebrata)2.78e-1223
neuron1.44e-0933
neuronal stem cell1.44e-0933
neuroblast1.44e-0933
electrically signaling cell1.44e-0933

Uber anatomy
Ontology termp-valuen
neurectoderm3.49e-1964
neural plate3.49e-1964
presumptive neural plate3.49e-1964
regional part of nervous system9.14e-1954
neural tube8.99e-1852
neural rod8.99e-1852
future spinal cord8.99e-1852
neural keel8.99e-1852
ecto-epithelium2.22e-1773
central nervous system6.82e-1773
ectoderm-derived structure1.10e-1695
ectoderm1.10e-1695
presumptive ectoderm1.10e-1695
pre-chordal neural plate4.62e-1649
nervous system1.49e-1575
brain4.08e-1547
future brain4.08e-1547
structure with developmental contribution from neural crest1.04e-1492
regional part of brain1.63e-1446
gray matter2.57e-1434
anterior neural tube6.76e-1440
regional part of forebrain1.94e-1339
forebrain1.94e-1339
future forebrain1.94e-1339
brain grey matter1.72e-1129
regional part of telencephalon1.72e-1129
telencephalon1.72e-1129
cerebral cortex1.06e-0821
cerebral hemisphere1.06e-0821
pallium1.06e-0821
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