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{{f5samples
{{f5samples
|id=FF:10493-107B7
|DRA_sample_Accession=CAGE@SAMD00005627
|name=mesothelioma cell line:ACC-MESO-1
|accession_numbers=CAGE;DRX007936;DRR008808;DRZ000233;DRZ001618;DRZ011583;DRZ012968
|sample_id=10493
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002369,UBERON:0002100,UBERON:0001851,UBERON:0001235,UBERON:0000064,UBERON:0010314,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002368,UBERON:0005177,UBERON:0005172,UBERON:0002530,UBERON:0006858,UBERON:0010317,UBERON:0005173,UBERON:0002417,UBERON:0000949,UBERON:0000916
|rna_tube_id=107B7
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000151,CL:0000066,CL:0002371,CL:0000076,CL:0000213,CL:0002078,CL:0000150,CL:0000163,CL:0000215,CL:0000174,CL:0000255,CL:0000077,CL:0002097
|rna_box=107
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:0050687,DOID:305,DOID:170
|rna_position=B7
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0101120,FF:0102219,FF:0102424
|sample_cell_lot=
|comment=
|sample_cell_catalog=RCB2292
|created_by=
|sample_company=RIKEN Bioresource centre
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
|expression_enrichment_score=chr7:63505799..63505904,+!p1@ZNF727!1.43!26.00!ZNF727;;chr17:17726907..17726958,-!p2@SREBF1!1.38!137.15!SREBF1;;chr9:96717629..96717644,-!p1@BARX1!1.38!23.11!BARX1;;chr6:10412600..10412637,-!p1@TFAP2A!1.36!36.41!TFAP2A;;chr6:10415276..10415341,-!p2@TFAP2A!1.33!24.85!TFAP2A;;chr19:22193731..22193751,-!p1@ZNF208!1.33!20.61!ZNF208;;chr6:29648890..29648944,-!p1@ZFP57!1.30!18.88!ZFP57;;chr19:9609272..9609297,-!p1@ZNF560!1.28!17.91!ZNF560;;chr5:2751762..2751784,-!p1@IRX2!1.27!17.72!IRX2;;chr8:11561684..11561751,+!p1@GATA4!1.26!17.34!GATA4;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.26!17.14!ZBED1;;chr7:35293685..35293718,-!p1@TBX20!1.20!14.83!TBX20;;chr10:8096772..8096787,+!p2@GATA3!1.19!16.95!GATA3;;chr6:10412392..10412409,-!p4@TFAP2A!1.16!15.41!TFAP2A;;chr10:8096631..8096660,+!p1@GATA3!1.13!15.22!GATA3;;chr6:126240380..126240430,+!p2@NCOA7!1.11!31.01!NCOA7;;chr19:37464453..37464515,+!p4@ZNF568!1.11!11.75!ZNF568;;chr11:32457075..32457095,-!p1@WT1!1.09!11.36!WT1;;chr11:46299199..46299233,+!p1@CREB3L1!1.08!57.02!CREB3L1;;chr19:52956798..52956843,+!p1@ZNF578!1.05!20.80!ZNF578;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!1.03!9.82!ZNF676;;chr15:83953397..83953425,-!p1@BNC1!1.02!10.79!BNC1;;chr4:188916918..188916942,+!p1@ZFP42!1.02!9.44!ZFP42;;chr11:65686732..65686756,+!p2@DRAP1!1.01!39.49!DRAP1;;chr16:86544113..86544145,+!p1@FOXF1!1.00!11.36!FOXF1;;chr7:26191809..26191890,+!p1@NFE2L3!0.98!43.34!NFE2L3;;chr5:178368186..178368238,+!p1@ZNF454!0.92!13.48!ZNF454;;chr11:65667884..65667895,-!p2@FOSL1!0.90!28.32!FOSL1;;chr6:126240356..126240379,+!p7@NCOA7!0.90!8.67!NCOA7;;chr1:25256756..25256774,-!p1@RUNX3!0.89!13.10!RUNX3;;chr11:32457103..32457123,-!p3@WT1!0.88!6.55!WT1;;chr17:7197911..7197964,-!p1@YBX2!0.88!6.55!YBX2;;chr19:45908292..45908374,-!p1@PPP1R13L!0.87!60.10!PPP1R13L;;chr19:53496768..53496799,-!p1@ZNF702P!0.86!10.02!ZNF702P;;chr6:85473156..85473210,-!p2@TBX18!0.86!7.70!TBX18;;chr19:58545369..58545404,+!p2@ZSCAN1!0.86!6.16!ZSCAN1;;chr4:299227..299272,-!p1@ZNF732!0.86!6.16!ZNF732;;chr8:67525473..67525518,-!p1@MYBL1!0.85!14.45!MYBL1;;chr1:203764633..203764674,+!p2@ZC3H11A!0.85!10.21!ZC3H11A;;chr11:65667846..65667868,-!p1@FOSL1!0.84!166.04!FOSL1;;chr15:67418047..67418093,+!p4@SMAD3!0.84!7.70!SMAD3;;chr20:42295713..42295738,+!p2@MYBL2!0.82!35.63!MYBL2;;chr19:53636125..53636178,-!p1@ZNF415!0.82!16.76!ZNF415;;chr5:72744445..72744466,-!p2@FOXD1!0.82!9.63!FOXD1;;chr4:174450089..174450153,-!p2@HAND2!0.82!5.59!HAND2;;chr19:9609247..9609262,-!p2@ZNF560!0.82!5.59!ZNF560;;chr17:46682321..46682362,-!p1@HOXB6!0.82!5.59!HOXB6;;chr19:22605136..22605154,-!p1@ZNF98!0.82!5.59!ZNF98;;chr19:52598958..52599026,-!p1@ZNF841!0.81!56.05!ZNF841;;chr12:54772960..54773015,-!p3@ZNF385A!0.81!28.70!ZNF385A;;chr1:44513995..44514031,+!p1@KLF17!0.81!5.39!KLF17;;chr3:128206762..128206781,-!p2@GATA2!0.80!36.02!GATA2;;chr11:65686802..65686818,+!p6@DRAP1!0.80!9.63!DRAP1;;chr5:134369905..134369972,-!p1@PITX1!0.79!8.28!PITX1;;chr8:67525443..67525459,-!p2@MYBL1!0.79!7.90!MYBL1;;chr6:10415484..10415508,-!p3@TFAP2A!0.79!5.20!TFAP2A;;chr20:2673383..2673441,+!p1@EBF4!0.78!8.28!EBF4;;chr6:126240442..126240459,+!p4@NCOA7!0.78!6.55!NCOA7;;chr7:5111723..5111807,+!p2@RBAK!0.78!5.01!RBAK;;chr8:55370487..55370503,+!p1@SOX17!0.78!5.01!SOX17;;chr9:126774018..126774055,+!p1@LHX2!0.78!5.01!LHX2;;chr19:56879653..56879743,+!p1@ZNF542!0.77!39.68!ZNF542;;chr20:50721803..50721857,-!p2@ZFP64!0.77!8.09!ZFP64;;chr19:38042240..38042309,+!p2@ZNF540!0.77!7.70!ZNF540;;chr12:54447599..54447630,+!p3@HOXC4!0.77!6.16!HOXC4;;chr19:56879534..56879615,+!p3@ZNF542!0.76!7.70!ZNF542;;chr15:67418119..67418162,+!p5@SMAD3!0.76!5.39!SMAD3;;chr6:10412576..10412599,-!p5@TFAP2A!0.76!4.82!TFAP2A;;chr7:27153454..27153469,-!p2@HOXA3!0.76!4.82!HOXA3;;chr12:54378923..54378966,+!p1@HOXC10!0.76!4.82!HOXC10;;chr8:106330656..106330684,+!p1@ZFPM2!0.75!13.10!ZFPM2;;chr19:58629742..58629787,-!p2@ZSCAN18!0.75!4.62!ZSCAN18;;chr3:69811882..69811898,+!p6@MITF!0.73!4.43!MITF;;chr19:58545454..58545498,+!p1@ZSCAN1!0.72!4.24!ZSCAN1;;chr3:141868357..141868393,-!p3@TFDP2!0.71!30.43!TFDP2;;chr20:55204351..55204377,+!p1@TFAP2C!0.71!5.39!TFAP2C;;chr19:53758058..53758088,-!p2@ZNF677!0.70!14.64!ZNF677;;chr19:57352109..57352153,-!p2@ZIM2!0.70!4.05!ZIM2;;chr17:46687959..46688007,-!p2@HOXB7!0.69!5.59!HOXB7;;chr19:2867325..2867348,+!p1@ZNF556!0.69!3.85!ZNF556;;chr20:42295745..42295765,+!p1@MYBL2!0.68!71.85!MYBL2;;chr8:67525524..67525543,-!p3@MYBL1!0.68!6.74!MYBL1;;chr19:45260775..45260838,+!p5@BCL3!0.68!5.20!BCL3;;chr7:19157043..19157088,-!p2@TWIST1!0.67!10.21!TWIST1;;chr11:615570..615721,-!p2@IRF7!0.67!7.90!IRF7;;chr19:22817119..22817145,+!p1@ZNF492!0.67!6.55!ZNF492;;chr19:22966925..22966958,-!p1@ZNF99!0.67!3.66!ZNF99;;chr2:176969228..176969260,+!p1@HOXD11!0.67!3.66!HOXD11;;chr2:63277948..63277974,+!p1@OTX1!0.67!3.66!OTX1;;chr9:124976185..124976212,-!p4@LHX6!0.67!3.66!LHX6;;chr9:96717678..96717689,-!p2@BARX1!0.67!3.66!BARX1;;chr16:30537839..30537929,-!p1@ZNF768!0.65!25.04!ZNF768;;chr5:178157651..178157689,-!p1@ZNF354A!0.65!16.37!ZNF354A;;chr20:55205825..55205847,+!p2@TFAP2C!0.65!3.47!TFAP2C;;chr12:54380404..54380433,+!p3@HOXC10!0.65!3.47!HOXC10;;chr17:46703687..46703740,-!p1@HOXB9!0.65!3.47!HOXB9;;chr8:60031762..60031803,-!p3@TOX!0.64!5.20!TOX;;chr17:17726892..17726903,-!p6@SREBF1!0.64!3.85!SREBF1;;chr19:19729477..19729542,-!p1@PBX4!0.63!7.70!PBX4;;chr20:50808667..50808729,-!p3@ZFP64!0.63!6.93!ZFP64;;chr1:41827095..41827155,+!p1@FOXO6!0.63!4.62!FOXO6;;chr5:142780237..142780261,-!p7@NR3C1!0.63!3.27!NR3C1;;chr17:17740287..17740307,-!p1@SREBF1!0.62!99.97!SREBF1;;chr7:27135591..27135658,-!p1@HOXA1!0.62!6.74!HOXA1;;chr10:8095593..8095625,+!p3@GATA3!0.62!3.85!GATA3;;chr5:178286925..178287007,+!p1@ZNF354B!0.61!20.61!ZNF354B;;chr16:4366021..4366045,+!p@chr16:4366021..4366045,+!0.61!17.34!GLIS2;;chr19:22235279..22235301,+!p1@ZNF257!0.61!6.36!ZNF257;;chr7:19157248..19157268,-!p1@TWIST1!0.60!9.44!TWIST1;;chr9:114287433..114287513,+!p1@ZNF483!0.60!8.86!ZNF483;;chr8:28347737..28347785,-!p1@FBXO16,p2@ZNF395!0.60!7.13!ZNF395;;chr11:65686776..65686787,+!p9@DRAP1!0.60!3.66!DRAP1;;chr17:46622229..46622257,-!p6@HOXB2!0.59!3.47!HOXB2;;chr17:46622440..46622477,-!p5@HOXB2!0.59!3.27!HOXB2;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!0.59!2.89!PEG3;;chr18:53068911..53068935,-!p4@TCF4!0.58!3.27!TCF4;;chr17:70117153..70117174,+!p1@SOX9!0.57!34.67!SOX9;;chr3:150126759..150126784,+!p2@TSC22D2!0.57!14.83!TSC22D2;;chr11:65430554..65430579,-!p3@RELA!0.57!8.09!RELA;;chr2:46524474..46524491,+!p4@EPAS1!0.57!7.51!EPAS1;;chr3:5021268..5021282,+!p4@BHLHE40!0.57!6.36!BHLHE40;;chr10:8100691..8100732,+!p5@GATA3!0.57!2.70!GATA3;;chr12:54393880..54393962,+!p1@HOXC9!0.57!2.70!HOXC9;;chr21:38071430..38071456,+!p1@SIM2!0.57!2.70!SIM2;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.57!2.70!SEBOX;;chr5:142780189..142780223,-!p6@NR3C1!0.57!2.70!NR3C1;;chr9:14314131..14314147,-!p2@NFIB!0.56!18.11!NFIB;;chr19:38146320..38146401,-!p1@ZFP30!0.56!17.53!ZFP30;;chr16:3493446..3493510,-!p1@ZNF597!0.56!14.25!ZNF597;;chr3:12329358..12329393,+!p3@PPARG!0.56!7.51!PPARG;;chr11:8102749..8102769,+!p2@TUB!0.56!5.78!TUB;;chr19:37464063..37464127,+!p2@ZNF568!0.56!3.66!ZNF568;;chr22:22863052..22863133,-!p1@ZNF280B!0.55!7.90!ZNF280B;;chr2:200323414..200323455,-!p1@SATB2!0.55!6.36!SATB2;;chr3:129158854..129158883,-!p3@MBD4!0.54!15.22!MBD4;;chr1:33004996..33005017,+!p3@ZBTB8A!0.54!3.66!ZBTB8A;;chr19:22398533..22398542,-!p@chr19:22398533..22398542,-!0.54!2.50!ZNF676;;chr12:54380036..54380091,+!p4@HOXC10!0.54!2.50!HOXC10;;chr12:54447637..54447659,+!p4@HOXC4!0.54!2.50!HOXC4;;chr5:2751785..2751808,-!p2@IRX2!0.54!2.50!IRX2;;chr2:238600789..238600925,+!p1@LRRFIP1!0.53!61.45!LRRFIP1;;chr12:124873357..124873401,-!p1@NCOR2!0.53!35.63!NCOR2;;chr4:1873011..1873063,+!p2@WHSC1!0.52!9.63!WHSC1;;chr19:53496806..53496848,-!p2@ZNF702P!0.52!3.85!ZNF702P;;chr16:54320158..54320200,-!p5@IRX3!0.52!3.66!IRX3;;chr9:110251836..110251887,-!p4@KLF4!0.52!3.27!KLF4;;chr5:134369879..134369898,-!p2@PITX1!0.52!2.31!PITX1;;chr7:35293665..35293680,-!p2@TBX20!0.52!2.31!TBX20;;chr19:56879625..56879636,+!p5@ZNF542!0.52!2.31!ZNF542;;chr11:65668011..65668020,-!p3@FOSL1!0.52!2.31!FOSL1;;chr12:54447219..54447237,+!p6@HOXC4!0.52!2.31!HOXC4;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!0.52!2.31!SEBOX;;chr1:26496382..26496457,+!p1@ZNF593!0.51!176.63!ZNF593;;chr5:72744594..72744609,-!p1@FOXD1!0.51!12.91!FOXD1;;chr14:61116183..61116208,-!p1@SIX1!0.51!10.59!SIX1;;chr19:44331493..44331552,+!p1@ZNF283!0.51!10.02!ZNF283;;chr8:106330696..106330719,+!p2@ZFPM2!0.51!3.08!ZFPM2;;chrX:128657457..128657475,-!p1@SMARCA1!0.50!32.94!SMARCA1;;chr15:67357924..67357952,+!p2@SMAD3!0.50!18.68!SMAD3;;chr2:46524897..46524911,+!p2@EPAS1!0.50!7.51!EPAS1;;chr5:150284532..150284549,-!p1@ZNF300!0.50!5.39!ZNF300;;chr17:46688334..46688385,-!p1@HOXB7!0.50!3.47!HOXB7;;chr6:44233252..44233296,-!p1@NFKBIE!0.49!27.16!NFKBIE;;chr1:935467..935484,-!p1@HES4!0.49!11.75!HES4;;chr19:12203100..12203132,+!p1@ZNF788!0.49!5.01!ZNF788;;chr5:174151553..174151610,+!p1@MSX2!0.49!4.05!MSX2;;chr8:28243785..28243799,-!p6@ZNF395!0.49!2.70!ZNF395;;chr6:10412477..10412490,-!p10@TFAP2A!0.49!2.12!TFAP2A;;chr6:10415263..10415274,-!p8@TFAP2A!0.49!2.12!TFAP2A;;chr19:48773337..48773339,+!p2@ZNF114!0.49!2.12!ZNF114;;chr10:64134045..64134083,+!p3@ZNF365!0.49!2.12!ZNF365;;chr3:12329339..12329356,+!p5@PPARG!0.49!2.12!PPARG;;chr4:174451370..174451387,-!p1@HAND2!0.49!2.12!HAND2;;chr8:37553292..37553317,+!p1@ZNF703!0.48!64.53!ZNF703;;chr19:53935221..53935258,+!p1@ZNF761!0.48!27.54!ZNF761;;chr7:149470641..149470694,-!p1@ZNF467!0.48!11.94!ZNF467;;chr3:44771092..44771160,+!p1@ZNF501!0.48!10.59!ZNF501;;chr3:5021191..5021202,+!p3@BHLHE40!0.48!6.74!BHLHE40;;chr5:178157700..178157734,-!p3@ZNF354A!0.48!5.01!ZNF354A;;chr6:27356527..27356557,+!p2@ZNF391!0.48!3.08!ZNF391;;chr4:4291861..4291913,-!p1@LYAR!0.47!61.45!LYAR;;chr7:139762641..139762768,-!p1@PARP12!0.47!36.60!PARP12;;chr7:137686824..137686865,-!p2@CREB3L2!0.47!33.52!CREB3L2;;chr5:56247935..56247959,-!p1@MIER3!0.47!13.87!MIE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|sample_dev_stage=
|ffid_belonging_in_development=CL:0000222
|sample_tissue=mesothelium
|sample_donor(cell lot)=
|sample_sex=female
|sample_age=61
|sample_ethnicity=J
|rna_rin=
|rna_od260/230=2.04
|rna_od260/280=2.07
|sample_cell_type=mesothelial cell
|sample_cell_line=ACC-MESO-1
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_experimental_condition=
|sample_disease=mesothelioma
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=50.6495
|rna_concentration=2.02598
|sample_note=
|profile_hcage=CNhs11263,LSID758,release008,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000076,CL:0000077,CL:0000144,CL:0000150,CL:0000151,CL:0000163,CL:0000174,CL:0000213,CL:0000215,CL:0000220,CL:0000222,CL:0000255,CL:0000548,CL:0002078,CL:0002097,CL:0002321,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000480,UBERON:0000916,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000926,UBERON:0000949,UBERON:0001062,UBERON:0001235,UBERON:0001851,UBERON:0002050,UBERON:0002100,UBERON:0002342,UBERON:0002346,UBERON:0002368,UBERON:0002369,UBERON:0002417,UBERON:0002530,UBERON:0002532,UBERON:0003075,UBERON:0004120,UBERON:0004121,UBERON:0005172,UBERON:0005173,UBERON:0005177,UBERON:0005423,UBERON:0006598,UBERON:0007284
|ancestors_in_disease_facet=DOID:0050686,DOID:0050687,DOID:14566,DOID:162,DOID:170,DOID:305,DOID:4,DOID:7
|sample_description=
|fonse_cell_line=FF:0101120,FF:0102424
|fonse_cell_line=FF:0101120,FF:0102424
|fonse_cell_line_closure=FF:0101120,FF:0102424
|fonse_cell_line_closure=FF:0101120,FF:0102424
Line 66: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mesothelioma%2520cell%2520line%253aACC-MESO-1.CNhs11263.10493-107B7.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mesothelioma%2520cell%2520line%253aACC-MESO-1.CNhs11263.10493-107B7.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mesothelioma%2520cell%2520line%253aACC-MESO-1.CNhs11263.10493-107B7.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/mesothelioma%2520cell%2520line%253aACC-MESO-1.CNhs11263.10493-107B7.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/mesothelioma%2520cell%2520line%253aACC-MESO-1.CNhs11263.10493-107B7.hg38.nobarcode.ctss.bed.gz
|id=FF:10493-107B7
|is_a=EFO:0002091;;FF:0000210;;FF:0102219;;FF:0102424
|is_obsolete=
|library_id=CNhs11263
|library_id_phase_based=2:CNhs11263
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10493
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10493
|name=mesothelioma cell line:ACC-MESO-1
|namespace=FANTOM5
|part_of=
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|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=107
|rna_catalog_number=
|rna_concentration=2.02598
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=2.04
|rna_od260/280=2.07
|rna_position=B7
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=107B7
|rna_weight_ug=50.6495
|sample_age=61
|sample_category=cell lines
|sample_cell_catalog=RCB2292
|sample_cell_line=ACC-MESO-1
|sample_cell_lot=
|sample_cell_type=mesothelial cell
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_company=RIKEN Bioresource centre
|sample_description=
|sample_dev_stage=
|sample_disease=mesothelioma
|sample_donor(cell lot)=
|sample_ethnicity=J
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.60287041739389e-264!GO:0043226;organelle;5.70312305953798e-212!GO:0043229;intracellular organelle;2.95062160498793e-211!GO:0043231;intracellular membrane-bound organelle;2.09474834848467e-209!GO:0043227;membrane-bound organelle;2.89555925556113e-209!GO:0005737;cytoplasm;2.78266680788966e-189!GO:0044422;organelle part;1.73420111064583e-143!GO:0044446;intracellular organelle part;7.38607961123322e-142!GO:0044444;cytoplasmic part;8.44485846901164e-132!GO:0032991;macromolecular complex;1.31582269592478e-95!GO:0044238;primary metabolic process;2.41805680483594e-92!GO:0005634;nucleus;9.16430994915334e-91!GO:0043170;macromolecule metabolic process;2.79358094072518e-90!GO:0044237;cellular metabolic process;6.21298221458273e-90!GO:0030529;ribonucleoprotein complex;1.81651539456445e-87!GO:0003723;RNA binding;7.05999245796392e-78!GO:0044428;nuclear part;1.42051792911262e-75!GO:0043233;organelle lumen;1.38768038614943e-71!GO:0031974;membrane-enclosed lumen;1.38768038614943e-71!GO:0005515;protein binding;4.88950023762358e-70!GO:0005739;mitochondrion;6.21185831083031e-61!GO:0043283;biopolymer metabolic process;3.37874141843986e-56!GO:0016043;cellular component organization and biogenesis;2.33558585740769e-53!GO:0031090;organelle membrane;2.43554822697127e-51!GO:0006412;translation;5.76150484080308e-51!GO:0010467;gene expression;1.82434620518842e-50!GO:0006396;RNA processing;2.07375736489485e-50!GO:0019538;protein metabolic process;1.05068028975996e-49!GO:0005840;ribosome;1.48859565507817e-49!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.97611508133182e-48!GO:0043234;protein complex;2.35621509179491e-46!GO:0031981;nuclear lumen;1.76454887334483e-45!GO:0044260;cellular macromolecule metabolic process;1.69845600871317e-44!GO:0044267;cellular protein metabolic process;3.30459925542583e-44!GO:0003735;structural constituent of ribosome;7.00603077793477e-44!GO:0033036;macromolecule localization;8.30994839871057e-44!GO:0015031;protein transport;2.626918732227e-43!GO:0045184;establishment of protein localization;2.41943957761329e-40!GO:0008104;protein localization;9.05467684944925e-40!GO:0044429;mitochondrial part;2.02010920261428e-39!GO:0016071;mRNA metabolic process;1.03133057189178e-38!GO:0005829;cytosol;5.43108709089425e-38!GO:0009059;macromolecule biosynthetic process;5.70903202315303e-38!GO:0031967;organelle envelope;8.89646635883461e-38!GO:0033279;ribosomal subunit;1.84141847183831e-37!GO:0031975;envelope;2.01210751732797e-37!GO:0009058;biosynthetic process;1.6222713753106e-36!GO:0044249;cellular biosynthetic process;4.33800762877558e-36!GO:0008380;RNA splicing;9.41186869091207e-36!GO:0043228;non-membrane-bound organelle;2.92686978984404e-35!GO:0043232;intracellular non-membrane-bound organelle;2.92686978984404e-35!GO:0046907;intracellular transport;5.07035034911921e-35!GO:0003676;nucleic acid binding;3.48242750333575e-34!GO:0006996;organelle organization and biogenesis;6.84343813213286e-34!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.06692172902683e-33!GO:0006397;mRNA processing;9.28065608622444e-33!GO:0065003;macromolecular complex assembly;8.25876507069247e-31!GO:0022607;cellular component assembly;3.83769220085441e-28!GO:0006886;intracellular protein transport;9.98017822002826e-28!GO:0005681;spliceosome;1.58183414150337e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.38336451370373e-26!GO:0000166;nucleotide binding;2.75434375944243e-26!GO:0005654;nucleoplasm;6.5625229990306e-26!GO:0005740;mitochondrial envelope;1.33669374305977e-25!GO:0051649;establishment of cellular localization;2.13945086904224e-25!GO:0016070;RNA metabolic process;2.53909634025296e-25!GO:0051641;cellular localization;4.07866030284886e-25!GO:0006259;DNA metabolic process;9.44820181032622e-25!GO:0017111;nucleoside-triphosphatase activity;3.33932367028264e-24!GO:0016462;pyrophosphatase activity;4.09749630915319e-24!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.18210828806044e-24!GO:0016817;hydrolase activity, acting on acid anhydrides;9.52467298001551e-24!GO:0031966;mitochondrial membrane;9.76777625833164e-24!GO:0012505;endomembrane system;1.7712877724739e-23!GO:0005730;nucleolus;1.40878810369323e-22!GO:0019866;organelle inner membrane;2.13896171101296e-22!GO:0044451;nucleoplasm part;1.12936162525356e-21!GO:0044445;cytosolic part;1.3234656739805e-21!GO:0005743;mitochondrial inner membrane;3.58767692584801e-21!GO:0006119;oxidative phosphorylation;3.19946110930637e-20!GO:0006512;ubiquitin cycle;7.30374058097265e-20!GO:0016874;ligase activity;9.20899284305277e-20!GO:0006457;protein folding;1.37093689473897e-19!GO:0022618;protein-RNA complex assembly;1.69325050904352e-19!GO:0015934;large ribosomal subunit;1.93901131552119e-19!GO:0032553;ribonucleotide binding;2.1055308647791e-19!GO:0032555;purine ribonucleotide binding;2.1055308647791e-19!GO:0007049;cell cycle;2.61298282849876e-19!GO:0005783;endoplasmic reticulum;4.76213313058963e-19!GO:0015935;small ribosomal subunit;4.76213313058963e-19!GO:0051603;proteolysis involved in cellular protein catabolic process;2.36349042164927e-18!GO:0044265;cellular macromolecule catabolic process;2.94721876392866e-18!GO:0017076;purine nucleotide binding;3.31938681727763e-18!GO:0019941;modification-dependent protein catabolic process;3.65806744683559e-18!GO:0043632;modification-dependent macromolecule catabolic process;3.65806744683559e-18!GO:0044257;cellular protein catabolic process;6.37845519029819e-18!GO:0006511;ubiquitin-dependent protein catabolic process;9.89508284002891e-18!GO:0043285;biopolymer catabolic process;1.11258222093843e-17!GO:0044455;mitochondrial membrane part;1.30807466910026e-17!GO:0005794;Golgi apparatus;3.50459374846956e-17!GO:0048770;pigment granule;9.80582806457917e-17!GO:0042470;melanosome;9.80582806457917e-17!GO:0008134;transcription factor binding;1.31977624067703e-16!GO:0008135;translation factor activity, nucleic acid binding;2.50972885766372e-16!GO:0009057;macromolecule catabolic process;5.68589656466496e-16!GO:0000502;proteasome complex (sensu Eukaryota);7.71727244273571e-16!GO:0030163;protein catabolic process;8.0849582016839e-16!GO:0031980;mitochondrial lumen;9.36088046679189e-16!GO:0005759;mitochondrial matrix;9.36088046679189e-16!GO:0005524;ATP binding;1.09352484859921e-15!GO:0044432;endoplasmic reticulum part;2.28228640378066e-15!GO:0032559;adenyl ribonucleotide binding;3.06337866203172e-15!GO:0016192;vesicle-mediated transport;3.50324917281313e-15!GO:0048193;Golgi vesicle transport;4.37117323996221e-15!GO:0042254;ribosome biogenesis and assembly;5.27864512193468e-15!GO:0051082;unfolded protein binding;7.50121710827756e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.51676062211364e-15!GO:0043412;biopolymer modification;9.67191461161433e-15!GO:0005761;mitochondrial ribosome;1.12371916022515e-14!GO:0000313;organellar ribosome;1.12371916022515e-14!GO:0022402;cell cycle process;5.41750741527164e-14!GO:0030554;adenyl nucleotide binding;6.06198348510652e-14!GO:0006974;response to DNA damage stimulus;6.38057353340101e-14!GO:0005746;mitochondrial respiratory chain;8.61013135245388e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;9.68256593031899e-14!GO:0000375;RNA splicing, via transesterification reactions;9.68256593031899e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.68256593031899e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.60296470062552e-13!GO:0050136;NADH dehydrogenase (quinone) activity;1.60913956529732e-13!GO:0003954;NADH dehydrogenase activity;1.60913956529732e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.60913956529732e-13!GO:0006605;protein targeting;3.10586885450806e-13!GO:0016887;ATPase activity;3.77312307700698e-13!GO:0005635;nuclear envelope;4.26463887243989e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.03308820951295e-13!GO:0050794;regulation of cellular process;9.51725983595879e-13!GO:0003743;translation initiation factor activity;1.38933756307674e-12!GO:0006464;protein modification process;1.46136228299343e-12!GO:0012501;programmed cell death;1.61915380591703e-12!GO:0044248;cellular catabolic process;2.14536345875315e-12!GO:0042623;ATPase activity, coupled;2.22279091723018e-12!GO:0006915;apoptosis;2.50525041324018e-12!GO:0000278;mitotic cell cycle;3.29564164988813e-12!GO:0031965;nuclear membrane;4.38701064352292e-12!GO:0051186;cofactor metabolic process;5.24629661213646e-12!GO:0006413;translational initiation;5.99607100066791e-12!GO:0016604;nuclear body;7.09217899290005e-12!GO:0042775;organelle ATP synthesis coupled electron transport;9.25911395635706e-12!GO:0042773;ATP synthesis coupled electron transport;9.25911395635706e-12!GO:0003712;transcription cofactor activity;1.33064295983164e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.57325975147265e-11!GO:0030964;NADH dehydrogenase complex (quinone);1.65099828404112e-11!GO:0045271;respiratory chain complex I;1.65099828404112e-11!GO:0005747;mitochondrial respiratory chain complex I;1.65099828404112e-11!GO:0005793;ER-Golgi intermediate compartment;1.79954679549485e-11!GO:0005694;chromosome;1.81286190380251e-11!GO:0008219;cell death;2.52678920485615e-11!GO:0016265;death;2.52678920485615e-11!GO:0008639;small protein conjugating enzyme activity;2.84503011861118e-11!GO:0004386;helicase activity;2.92361168371442e-11!GO:0006281;DNA repair;3.69368865392172e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.9474412302367e-11!GO:0006446;regulation of translational initiation;4.2564038817317e-11!GO:0005789;endoplasmic reticulum membrane;5.89877931384504e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.55397580762876e-11!GO:0004842;ubiquitin-protein ligase activity;6.93022378825993e-11!GO:0043687;post-translational protein modification;9.25576232000001e-11!GO:0044453;nuclear membrane part;1.09410531015606e-10!GO:0006399;tRNA metabolic process;1.3291904365386e-10!GO:0019787;small conjugating protein ligase activity;1.33336643370011e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.41889313962815e-10!GO:0051276;chromosome organization and biogenesis;2.37592045679784e-10!GO:0006366;transcription from RNA polymerase II promoter;4.66842537872526e-10!GO:0016881;acid-amino acid ligase activity;5.33279113209573e-10!GO:0051301;cell division;6.37443483683424e-10!GO:0008026;ATP-dependent helicase activity;7.30791929066247e-10!GO:0006913;nucleocytoplasmic transport;8.17342105172306e-10!GO:0005768;endosome;8.28954806783748e-10!GO:0006260;DNA replication;9.18473969671001e-10!GO:0006364;rRNA processing;1.02316543104274e-09!GO:0016607;nuclear speck;1.2018582237951e-09!GO:0009055;electron carrier activity;1.35251013006222e-09!GO:0051169;nuclear transport;1.5070460082171e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.54165160366821e-09!GO:0016072;rRNA metabolic process;1.83008412387749e-09!GO:0044427;chromosomal part;2.3551648310132e-09!GO:0005643;nuclear pore;2.58182245579486e-09!GO:0003924;GTPase activity;2.70504912074692e-09!GO:0022403;cell cycle phase;4.53978896388691e-09!GO:0006461;protein complex assembly;4.62197975000313e-09!GO:0006732;coenzyme metabolic process;4.88823748652184e-09!GO:0050789;regulation of biological process;5.09403414413195e-09!GO:0009259;ribonucleotide metabolic process;5.30153094859916e-09!GO:0000087;M phase of mitotic cell cycle;5.60864718923089e-09!GO:0007067;mitosis;7.47648786275765e-09!GO:0009719;response to endogenous stimulus;8.19487603773097e-09!GO:0006163;purine nucleotide metabolic process;8.28803827662397e-09!GO:0006403;RNA localization;8.95450997430387e-09!GO:0050657;nucleic acid transport;9.54459597118065e-09!GO:0051236;establishment of RNA localization;9.54459597118065e-09!GO:0050658;RNA transport;9.54459597118065e-09!GO:0065002;intracellular protein transport across a membrane;1.24694418082715e-08!GO:0008565;protein transporter activity;1.40955488719129e-08!GO:0006164;purine nucleotide biosynthetic process;2.05583845365426e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.11472476110336e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.1599102463766e-08!GO:0009150;purine ribonucleotide metabolic process;2.34424959263904e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;2.53224134551817e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.67881549726223e-08!GO:0004812;aminoacyl-tRNA ligase activity;2.67881549726223e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.67881549726223e-08!GO:0009260;ribonucleotide biosynthetic process;3.15388357508314e-08!GO:0043067;regulation of programmed cell death;3.18912047570351e-08!GO:0042981;regulation of apoptosis;3.72476384119933e-08!GO:0046930;pore complex;3.91852168061285e-08!GO:0051246;regulation of protein metabolic process;4.32804497236704e-08!GO:0006888;ER to Golgi vesicle-mediated transport;4.3846096177692e-08!GO:0043038;amino acid activation;4.4446716466037e-08!GO:0006418;tRNA aminoacylation for protein translation;4.4446716466037e-08!GO:0043039;tRNA aminoacylation;4.4446716466037e-08!GO:0007005;mitochondrion organization and biogenesis;5.11495179274543e-08!GO:0009152;purine ribonucleotide biosynthetic process;5.50289935447646e-08!GO:0009199;ribonucleoside triphosphate metabolic process;5.81348379046536e-08!GO:0019222;regulation of metabolic process;6.34028830875172e-08!GO:0006323;DNA packaging;7.15050102720283e-08!GO:0015986;ATP synthesis coupled proton transport;7.52501242159586e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.52501242159586e-08!GO:0043069;negative regulation of programmed cell death;1.01497503154604e-07!GO:0009141;nucleoside triphosphate metabolic process;1.0165823980871e-07!GO:0044431;Golgi apparatus part;1.08089648372194e-07!GO:0006916;anti-apoptosis;1.08270657743241e-07!GO:0048523;negative regulation of cellular process;1.15807063882495e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.15807063882495e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.15807063882495e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.15807063882495e-07!GO:0051726;regulation of cell cycle;1.38459615035889e-07!GO:0019829;cation-transporting ATPase activity;1.44785807314155e-07!GO:0000074;regulation of progression through cell cycle;1.5099665961954e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.56582391017086e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.56582391017086e-07!GO:0032446;protein modification by small protein conjugation;1.5850733859303e-07!GO:0043066;negative regulation of apoptosis;1.80963116048703e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.82046566846976e-07!GO:0015630;microtubule cytoskeleton;2.10344891186851e-07!GO:0016567;protein ubiquitination;2.11638884408897e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.8678857512221e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.21981403820598e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.21981403820598e-07!GO:0000279;M phase;3.47878890167919e-07!GO:0046034;ATP metabolic process;3.85328454133864e-07!GO:0017038;protein import;4.00713241195608e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.66823296894392e-07!GO:0000245;spliceosome assembly;4.78558265720733e-07!GO:0009056;catabolic process;4.85332862946023e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.85332862946023e-07!GO:0005839;proteasome core complex (sensu Eukaryota);5.5413351491674e-07!GO:0051028;mRNA transport;6.0269330489743e-07!GO:0030120;vesicle coat;6.07765358607495e-07!GO:0030662;coated vesicle membrane;6.07765358607495e-07!GO:0065004;protein-DNA complex assembly;7.19028392880416e-07!GO:0015078;hydrogen ion transmembrane transporter activity;7.67004193253905e-07!GO:0031988;membrane-bound vesicle;7.90179180491063e-07!GO:0006754;ATP biosynthetic process;8.57213344007403e-07!GO:0006753;nucleoside phosphate metabolic process;8.57213344007403e-07!GO:0016023;cytoplasmic membrane-bound vesicle;9.04339485938203e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.08139133553125e-06!GO:0048475;coated membrane;1.4202091435557e-06!GO:0030117;membrane coat;1.4202091435557e-06!GO:0005525;GTP binding;1.52457019353017e-06!GO:0005770;late endosome;1.84621181604647e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.85686343556212e-06!GO:0051188;cofactor biosynthetic process;1.90030932905443e-06!GO:0005788;endoplasmic reticulum lumen;1.9509166632472e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.04235015889236e-06!GO:0048519;negative regulation of biological process;2.39196564712314e-06!GO:0045259;proton-transporting ATP synthase complex;2.70302020701588e-06!GO:0005813;centrosome;2.73609198415356e-06!GO:0016779;nucleotidyltransferase activity;3.02678997409231e-06!GO:0031982;vesicle;3.07517864195634e-06!GO:0016568;chromatin modification;3.16704005590977e-06!GO:0004298;threonine endopeptidase activity;3.68818622611732e-06!GO:0043623;cellular protein complex assembly;3.83720318226941e-06!GO:0016563;transcription activator activity;4.32593397507102e-06!GO:0051789;response to protein stimulus;4.61646534893643e-06!GO:0006986;response to unfolded protein;4.61646534893643e-06!GO:0009060;aerobic respiration;4.75879984709045e-06!GO:0016740;transferase activity;4.97639922463705e-06!GO:0031410;cytoplasmic vesicle;5.29139090454134e-06!GO:0000139;Golgi membrane;5.69988169096787e-06!GO:0000785;chromatin;5.87627543729978e-06!GO:0005667;transcription factor complex;7.10034804657195e-06!GO:0044440;endosomal part;7.30371261097891e-06!GO:0010008;endosome membrane;7.30371261097891e-06!GO:0006333;chromatin assembly or disassembly;7.77655999701412e-06!GO:0016787;hydrolase activity;7.9832514537584e-06!GO:0031252;leading edge;9.34148239269458e-06!GO:0000151;ubiquitin ligase complex;9.92263675373089e-06!GO:0006613;cotranslational protein targeting to membrane;1.06759897734144e-05!GO:0005815;microtubule organizing center;1.11055263882785e-05!GO:0003713;transcription coactivator activity;1.24390513197209e-05!GO:0031323;regulation of cellular metabolic process;1.37847912088602e-05!GO:0003714;transcription corepressor activity;1.37847912088602e-05!GO:0003724;RNA helicase activity;1.49732347546247e-05!GO:0009117;nucleotide metabolic process;1.56815528374576e-05!GO:0043566;structure-specific DNA binding;1.81998620453063e-05!GO:0007010;cytoskeleton organization and biogenesis;2.08911293993659e-05!GO:0032561;guanyl ribonucleotide binding;2.3766260843101e-05!GO:0019001;guanyl nucleotide binding;2.3766260843101e-05!GO:0045333;cellular respiration;2.9151512538509e-05!GO:0009108;coenzyme biosynthetic process;2.93129347247492e-05!GO:0006793;phosphorus metabolic process;2.96291146864586e-05!GO:0006796;phosphate metabolic process;2.96291146864586e-05!GO:0005762;mitochondrial large ribosomal subunit;3.07018663324866e-05!GO:0000315;organellar large ribosomal subunit;3.07018663324866e-05!GO:0006752;group transfer coenzyme metabolic process;3.2187299430359e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.06054860142117e-05!GO:0048471;perinuclear region of cytoplasm;4.13981955411616e-05!GO:0016564;transcription repressor activity;4.2058923056754e-05!GO:0006350;transcription;4.38354503089118e-05!GO:0000314;organellar small ribosomal subunit;4.38354503089118e-05!GO:0005763;mitochondrial small ribosomal subunit;4.38354503089118e-05!GO:0003697;single-stranded DNA binding;4.91949746305321e-05!GO:0065007;biological regulation;4.99959926288637e-05!GO:0051427;hormone receptor binding;5.03242733480806e-05!GO:0005773;vacuole;5.05106828335223e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.17317508417826e-05!GO:0008654;phospholipid biosynthetic process;5.21990232649113e-05!GO:0051170;nuclear import;5.34805704370019e-05!GO:0030036;actin cytoskeleton organization and biogenesis;7.64481172891944e-05!GO:0031072;heat shock protein binding;8.44577346104101e-05!GO:0006606;protein import into nucleus;9.38960630619833e-05!GO:0035257;nuclear hormone receptor binding;0.000103660125103177!GO:0006612;protein targeting to membrane;0.000110892896655668!GO:0005798;Golgi-associated vesicle;0.000112850860739296!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000113883113180667!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000118767549880837!GO:0016853;isomerase activity;0.000118997425313452!GO:0030867;rough endoplasmic reticulum membrane;0.000124509886735131!GO:0005819;spindle;0.000125071855458122!GO:0044452;nucleolar part;0.000126556556934429!GO:0045045;secretory pathway;0.000127564670542475!GO:0006099;tricarboxylic acid cycle;0.000127942513401882!GO:0046356;acetyl-CoA catabolic process;0.000127942513401882!GO:0051187;cofactor catabolic process;0.000128342292146513!GO:0033116;ER-Golgi intermediate compartment membrane;0.000131672595979546!GO:0031324;negative regulation of cellular metabolic process;0.00013986087300479!GO:0005048;signal sequence binding;0.000145570773035871!GO:0005769;early endosome;0.000146463318612725!GO:0045454;cell redox homeostasis;0.000149380895536412!GO:0051168;nuclear export;0.000178071650689048!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000178549209764456!GO:0043021;ribonucleoprotein binding;0.000184321077829243!GO:0006084;acetyl-CoA metabolic process;0.000193618092504327!GO:0016310;phosphorylation;0.000198378477262745!GO:0010468;regulation of gene expression;0.000217368174749017!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000240638735993096!GO:0016859;cis-trans isomerase activity;0.000297059271039706!GO:0008186;RNA-dependent ATPase activity;0.000312118954500952!GO:0019899;enzyme binding;0.000346116271427766!GO:0006261;DNA-dependent DNA replication;0.000381439320576229!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000388583752433941!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000390624866236284!GO:0015399;primary active transmembrane transporter activity;0.000390624866236284!GO:0009892;negative regulation of metabolic process;0.000393859932394547!GO:0008250;oligosaccharyl transferase complex;0.000415440119527945!GO:0030029;actin filament-based process;0.000440117239077098!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000448607156695613!GO:0031968;organelle outer membrane;0.000470100522097476!GO:0003899;DNA-directed RNA polymerase activity;0.000493111584726665!GO:0000323;lytic vacuole;0.000544529885505082!GO:0005764;lysosome;0.000544529885505082!GO:0003729;mRNA binding;0.000554722265609316!GO:0005885;Arp2/3 protein complex;0.000557704380709281!GO:0007051;spindle organization and biogenesis;0.000594229275604006!GO:0006402;mRNA catabolic process;0.00064244607002328!GO:0008033;tRNA processing;0.000655988168507366!GO:0009109;coenzyme catabolic process;0.000676825784706543!GO:0019867;outer membrane;0.000690118357931978!GO:0007243;protein kinase cascade;0.000727420216858203!GO:0005791;rough endoplasmic reticulum;0.000736546718129179!GO:0016481;negative regulation of transcription;0.000742570395377605!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000746836113714071!GO:0045786;negative regulation of progression through cell cycle;0.00082796321124998!GO:0006352;transcription initiation;0.000839803157910656!GO:0006414;translational elongation;0.000845857763568389!GO:0019843;rRNA binding;0.000853252020534329!GO:0046474;glycerophospholipid biosynthetic process;0.000901268554966019!GO:0004004;ATP-dependent RNA helicase activity;0.000901268554966019!GO:0006891;intra-Golgi vesicle-mediated transport;0.000922835214777133!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000952919903509866!GO:0000049;tRNA binding;0.00102230853072965!GO:0004576;oligosaccharyl transferase activity;0.00106030480544153!GO:0048522;positive regulation of cellular process;0.00106745167734093!GO:0001726;ruffle;0.00107177088966612!GO:0048487;beta-tubulin binding;0.00109617690515883!GO:0051325;interphase;0.00110332793703185!GO:0051920;peroxiredoxin activity;0.00110332793703185!GO:0030659;cytoplasmic vesicle membrane;0.0011161721737146!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00114689963201622!GO:0006401;RNA catabolic process;0.00132666456058574!GO:0044433;cytoplasmic vesicle part;0.00135397592480057!GO:0051329;interphase of mitotic cell cycle;0.00136883136239571!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00136883136239571!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00136883136239571!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00136883136239571!GO:0016197;endosome transport;0.00137654822178234!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00141659770837455!GO:0006839;mitochondrial transport;0.00143933723636003!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00145907710146384!GO:0032774;RNA biosynthetic process;0.00145907710146384!GO:0006351;transcription, DNA-dependent;0.0015232827985134!GO:0046467;membrane lipid biosynthetic process;0.00157787215108491!GO:0005741;mitochondrial outer membrane;0.0016063490189823!GO:0043681;protein import into mitochondrion;0.00162917046970441!GO:0016251;general RNA polymerase II transcription factor activity;0.00163955425943355!GO:0046489;phosphoinositide biosynthetic process;0.00167274845776802!GO:0012506;vesicle membrane;0.00173209381500435!GO:0030027;lamellipodium;0.00184393250774611!GO:0006626;protein targeting to mitochondrion;0.00190156125523311!GO:0005684;U2-dependent spliceosome;0.00193121907577082!GO:0000059;protein import into nucleus, docking;0.00195890810355988!GO:0016044;membrane organization and biogenesis;0.00200896707865609!GO:0006334;nucleosome assembly;0.0020305412334573!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00205983844455131!GO:0009165;nucleotide biosynthetic process;0.0020663879399097!GO:0043492;ATPase activity, coupled to movement of substances;0.00220683679531756!GO:0007264;small GTPase mediated signal transduction;0.00223669719637445!GO:0031497;chromatin assembly;0.00226010544443913!GO:0030134;ER to Golgi transport vesicle;0.00233547163557251!GO:0030132;clathrin coat of coated pit;0.00250404154280944!GO:0032940;secretion by cell;0.00265263654400068!GO:0016272;prefoldin complex;0.00267559456231625!GO:0030133;transport vesicle;0.00272700706730828!GO:0008361;regulation of cell size;0.00285747821591976!GO:0018196;peptidyl-asparagine modification;0.00288184315700662!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00288184315700662!GO:0008092;cytoskeletal protein binding;0.00296090050188914!GO:0051252;regulation of RNA metabolic process;0.00302451085579362!GO:0030127;COPII vesicle coat;0.00302913930559017!GO:0012507;ER to Golgi transport vesicle membrane;0.00302913930559017!GO:0005905;coated pit;0.00306289750755057!GO:0042802;identical protein binding;0.00306357355651859!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0030658175881811!GO:0030880;RNA polymerase complex;0.00320433269756878!GO:0003702;RNA polymerase II transcription factor activity;0.00323752609104257!GO:0003690;double-stranded DNA binding;0.00330270430843987!GO:0000775;chromosome, pericentric region;0.00330462522171019!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00331628714521678!GO:0016363;nuclear matrix;0.00360788035644859!GO:0048500;signal recognition particle;0.00368728961914167!GO:0003684;damaged DNA binding;0.00379492966456102!GO:0006497;protein amino acid lipidation;0.00388129768589019!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00390669807915215!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00390669807915215!GO:0035258;steroid hormone receptor binding;0.00398430357159591!GO:0015980;energy derivation by oxidation of organic compounds;0.00406222573177051!GO:0003711;transcription elongation regulator activity;0.00406785152406009!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00406785152406009!GO:0030176;integral to endoplasmic reticulum membrane;0.00420383540124592!GO:0008270;zinc ion binding;0.00420594145954146!GO:0004674;protein serine/threonine kinase activity;0.00433843342978276!GO:0051087;chaperone binding;0.00444729847404346!GO:0045449;regulation of transcription;0.00444729847404346!GO:0017166;vinculin binding;0.00445638018925018!GO:0008287;protein serine/threonine phosphatase complex;0.00456055433515097!GO:0003746;translation elongation factor activity;0.00456055433515097!GO:0016049;cell growth;0.00456055433515097!GO:0005874;microtubule;0.00456055433515097!GO:0030658;transport vesicle membrane;0.00459580998290233!GO:0008139;nuclear localization sequence binding;0.00476675112383636!GO:0030865;cortical cytoskeleton organization and biogenesis;0.00485261840455289!GO:0043624;cellular protein complex disassembly;0.00504967601698272!GO:0015631;tubulin binding;0.00533708174199666!GO:0030521;androgen receptor signaling pathway;0.00541290364896421!GO:0005669;transcription factor TFIID complex;0.00546697833614878!GO:0008637;apoptotic mitochondrial changes;0.00547961492737325!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00582043185901116!GO:0030663;COPI coated vesicle membrane;0.00638599629101371!GO:0030126;COPI vesicle coat;0.00638599629101371!GO:0008312;7S RNA binding;0.00638875438853729!GO:0008632;apoptotic program;0.00644478527856478!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00674964199774575!GO:0000428;DNA-directed RNA polymerase complex;0.00674964199774575!GO:0008601;protein phosphatase type 2A regulator activity;0.00685447426008778!GO:0031902;late endosome membrane;0.00692002838391947!GO:0007006;mitochondrial membrane organization and biogenesis;0.00692249272381123!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00693976059116193!GO:0045047;protein targeting to ER;0.00693976059116193!GO:0006650;glycerophospholipid metabolic process;0.00709142404403028!GO:0006417;regulation of translation;0.00727871791843131!GO:0006302;double-strand break repair;0.00742060461777271!GO:0006383;transcription from RNA polymerase III promoter;0.00747726168844812!GO:0043022;ribosome binding;0.00756329415717845!GO:0030137;COPI-coated vesicle;0.00779048035286783!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00811525776209041!GO:0015002;heme-copper terminal oxidase activity;0.00811525776209041!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00811525776209041!GO:0004129;cytochrome-c oxidase activity;0.00811525776209041!GO:0006611;protein export from nucleus;0.00844866627048415!GO:0031901;early endosome membrane;0.00861429056040748!GO:0051052;regulation of DNA metabolic process;0.00861429056040748!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00881151066205242!GO:0007052;mitotic spindle organization and biogenesis;0.00921723152760195!GO:0030660;Golgi-associated vesicle membrane;0.00923856825191999!GO:0043488;regulation of mRNA stability;0.00923856825191999!GO:0043487;regulation of RNA stability;0.00923856825191999!GO:0043284;biopolymer biosynthetic process;0.00931761784457148!GO:0032508;DNA duplex unwinding;0.00942709471839476!GO:0032392;DNA geometric change;0.00942709471839476!GO:0032984;macromolecular complex disassembly;0.009870064762571!GO:0048468;cell development;0.00988436034563349!GO:0005774;vacuolar membrane;0.0100706328922043!GO:0006376;mRNA splice site selection;0.010145456309716!GO:0000389;nuclear mRNA 3'-splice site recognition;0.010145456309716!GO:0000209;protein polyubiquitination;0.01019659246173!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0107512497972887!GO:0046483;heterocycle metabolic process;0.0107744475817966!GO:0006595;polyamine metabolic process;0.0108234337850891!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0109035059776497!GO:0000159;protein phosphatase type 2A complex;0.0109105141036428!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0109185674367803!GO:0006672;ceramide metabolic process;0.0110742420802386!GO:0006405;RNA export from nucleus;0.0110742420802386!GO:0030384;phosphoinositide metabolic process;0.0114173285650172!GO:0016491;oxidoreductase activity;0.0114827327631859!GO:0042158;lipoprotein biosynthetic process;0.0116475135688224!GO:0003682;chromatin binding;0.0118212200874286!GO:0006818;hydrogen transport;0.0120100364497498!GO:0003678;DNA helicase activity;0.012243569977047!GO:0031529;ruffle organization and biogenesis;0.0126972065276564!GO:0015992;proton transport;0.0129757722015715!GO:0001558;regulation of cell growth;0.0130047935914017!GO:0004177;aminopeptidase activity;0.0131702314521902!GO:0005657;replication fork;0.0136839448833904!GO:0008022;protein C-terminus binding;0.0137120981339117!GO:0006506;GPI anchor biosynthetic process;0.0138219557160441!GO:0005862;muscle thin filament tropomyosin;0.0139040975350019!GO:0043241;protein complex disassembly;0.0146101504952217!GO:0008094;DNA-dependent ATPase activity;0.0149624076139934!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.015483712275338!GO:0005832;chaperonin-containing T-complex;0.015483712275338!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0157549210801118!GO:0008234;cysteine-type peptidase activity;0.0158752067941816!GO:0022406;membrane docking;0.0160807817741354!GO:0048278;vesicle docking;0.0160807817741354!GO:0000082;G1/S transition of mitotic cell cycle;0.0163512261372088!GO:0046914;transition metal ion binding;0.0174375000405284!GO:0032200;telomere organization and biogenesis;0.0175621251318625!GO:0000723;telomere maintenance;0.0175621251318625!GO:0050681;androgen receptor binding;0.0179092889153905!GO:0007088;regulation of mitosis;0.0180822344864943!GO:0009112;nucleobase metabolic process;0.0182118247923565!GO:0031625;ubiquitin protein ligase binding;0.0183752443688965!GO:0006144;purine base metabolic process;0.0184616593258861!GO:0022890;inorganic cation transmembrane transporter activity;0.0186529939473707!GO:0030118;clathrin coat;0.0186718859540693!GO:0051098;regulation of binding;0.0191372840754056!GO:0006505;GPI anchor metabolic process;0.0192201381892558!GO:0009116;nucleoside metabolic process;0.0192201381892558!GO:0000776;kinetochore;0.0193073697373073!GO:0019783;small conjugating protein-specific protease activity;0.0197706145445198!GO:0016584;nucleosome positioning;0.0199509575494362!GO:0000075;cell cycle checkpoint;0.0200303661435959!GO:0006268;DNA unwinding during replication;0.0205112294389034!GO:0006355;regulation of transcription, DNA-dependent;0.0211568332743473!GO:0030433;ER-associated protein catabolic process;0.0214946211486379!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0214946211486379!GO:0009967;positive regulation of signal transduction;0.0215477096382001!GO:0031970;organelle envelope lumen;0.021743123749854!GO:0006338;chromatin remodeling;0.0219229748243394!GO:0005758;mitochondrial intermembrane space;0.0220936361593455!GO:0045892;negative regulation of transcription, DNA-dependent;0.0221084109828146!GO:0044437;vacuolar part;0.0222586323319599!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0223087952024626!GO:0007030;Golgi organization and biogenesis;0.0223894785589379!GO:0031124;mRNA 3'-end processing;0.0223894785589379!GO:0005765;lysosomal membrane;0.0224865869975909!GO:0003677;DNA binding;0.022712135643427!GO:0006904;vesicle docking during exocytosis;0.0228068336303333!GO:0051128;regulation of cellular component organization and biogenesis;0.0231451198276733!GO:0046519;sphingoid metabolic process;0.0232601139304419!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0233966237258079!GO:0051101;regulation of DNA binding;0.0234772273600433!GO:0004527;exonuclease activity;0.0235537247716574!GO:0050811;GABA receptor binding;0.0237514982144459!GO:0046966;thyroid hormone receptor binding;0.0238727861343525!GO:0004843;ubiquitin-specific protease activity;0.0239417885240335!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.024529930023518!GO:0007040;lysosome organization and biogenesis;0.024529930023518!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0248636002994541!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0250011730983868!GO:0010257;NADH dehydrogenase complex assembly;0.0250011730983868!GO:0033108;mitochondrial respiratory chain complex assembly;0.0250011730983868!GO:0007017;microtubule-based process;0.025083034031121!GO:0048518;positive regulation of biological process;0.0257639871157076!GO:0006892;post-Golgi vesicle-mediated transport;0.0260004790265054!GO:0065009;regulation of a molecular function;0.0261887011857334!GO:0005869;dynactin complex;0.0275690022501113!GO:0042168;heme metabolic process;0.0281754245718005!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0283979145242946!GO:0031326;regulation of cellular biosynthetic process;0.028740264867015!GO:0022411;cellular component disassembly;0.028778937488054!GO:0006778;porphyrin metabolic process;0.0289212265086169!GO:0033013;tetrapyrrole metabolic process;0.0289212265086169!GO:0005100;Rho GTPase activator activity;0.0294323382635049!GO:0006091;generation of precursor metabolites and energy;0.0295493114018191!GO:0003756;protein disulfide isomerase activity;0.0295883389336699!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0295883389336699!GO:0030518;steroid hormone receptor signaling pathway;0.0297117647358788!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0314237289933747!GO:0008538;proteasome activator activity;0.0314922676211295!GO:0022415;viral reproductive process;0.0315388819371669!GO:0003725;double-stranded RNA binding;0.0317539355733445!GO:0008180;signalosome;0.0318723910843035!GO:0001836;release of cytochrome c from mitochondria;0.0318847531667175!GO:0030119;AP-type membrane coat adaptor complex;0.0328476856819645!GO:0009889;regulation of biosynthetic process;0.0329047398339556!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0330138730338366!GO:0019206;nucleoside kinase activity;0.0331211862769847!GO:0000339;RNA cap binding;0.0332658775009105!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0332658775009105!GO:0005784;translocon complex;0.0336342702956192!GO:0006354;RNA elongation;0.0336342702956192!GO:0005938;cell cortex;0.0341007284475763!GO:0030125;clathrin vesicle coat;0.0345686968415304!GO:0030665;clathrin coated vesicle membrane;0.0345686968415304!GO:0006740;NADPH regeneration;0.034570683636114!GO:0006098;pentose-phosphate shunt;0.034570683636114!GO:0016791;phosphoric monoester hydrolase activity;0.0349813370390932!GO:0006310;DNA recombination;0.034986847735918!GO:0043065;positive regulation of apoptosis;0.035331846394591!GO:0005665;DNA-directed RNA polymerase II, core complex;0.035331846394591!GO:0051059;NF-kappaB binding;0.0358394370635253!GO:0030031;cell projection biogenesis;0.0372982319894189!GO:0043068;positive regulation of programmed cell death;0.0379106574554709!GO:0030911;TPR domain binding;0.0382150651227484!GO:0009451;RNA modification;0.0390184534210311!GO:0035035;histone acetyltransferase binding;0.0390905689873554!GO:0008168;methyltransferase activity;0.0399472244157!GO:0016790;thiolester hydrolase activity;0.0402679487860866!GO:0006007;glucose catabolic process;0.0405307517719056!GO:0016741;transferase activity, transferring one-carbon groups;0.0405307517719056!GO:0045893;positive regulation of transcription, DNA-dependent;0.0405497325581989!GO:0006378;mRNA polyadenylation;0.0415097425943262!GO:0000781;chromosome, telomeric region;0.0416250828113623!GO:0008047;enzyme activator activity;0.0416753852504299!GO:0043189;H4/H2A histone acetyltransferase complex;0.0418485115102167!GO:0004221;ubiquitin thiolesterase activity;0.0422926591228921!GO:0031371;ubiquitin conjugating enzyme complex;0.0424833781894538!GO:0045767;regulation of anti-apoptosis;0.0428355760241309!GO:0005876;spindle microtubule;0.0428355760241309!GO:0008610;lipid biosynthetic process;0.0429733116417881!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0433905859730329!GO:0016311;dephosphorylation;0.0434552811550313!GO:0000786;nucleosome;0.0434552811550313!GO:0005637;nuclear inner membrane;0.0435706859951544!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0439260876800428!GO:0007004;telomere maintenance via telomerase;0.0442137210026249!GO:0000096;sulfur amino acid metabolic process;0.0446877901280647!GO:0045941;positive regulation of transcription;0.045155877714661!GO:0043130;ubiquitin binding;0.0455849440813192!GO:0032182;small conjugating protein binding;0.0455849440813192!GO:0009615;response to virus;0.0467782203676577!GO:0051540;metal cluster binding;0.0471526739172443!GO:0051536;iron-sulfur cluster binding;0.0471526739172443!GO:0008097;5S rRNA binding;0.0471526739172443!GO:0006914;autophagy;0.0472972102774221!GO:0004532;exoribonuclease activity;0.0472972102774221!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0472972102774221!GO:0044262;cellular carbohydrate metabolic process;0.0472972102774221!GO:0008017;microtubule binding;0.0473152611371749!GO:0019904;protein domain specific binding;0.0473152611371749!GO:0004680;casein kinase activity;0.0473682773189928!GO:0007021;tubulin folding;0.047635000740054!GO:0007093;mitotic cell cycle checkpoint;0.0478488266818402!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0479236209760208!GO:0006897;endocytosis;0.0491498854324102!GO:0010324;membrane invagination;0.0491498854324102!GO:0016126;sterol biosynthetic process;0.0496145748087738!GO:0031418;L-ascorbic acid binding;0.0496145748087738!GO:0000738;DNA catabolic process, exonucleolytic;0.0496145748087738!GO:0006360;transcription from RNA polymerase I promoter;0.0496145748087738!GO:0046979;TAP2 binding;0.0496145748087738!GO:0046977;TAP binding;0.0496145748087738!GO:0046978;TAP1 binding;0.0496145748087738
|sample_id=10493
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=mesothelium
|top_motifs=FOXQ1:1.28511443378;PITX1..3:1.26387129252;SP1:1.23733658422;HMGA1,2:1.17834270083;ADNP_IRX_SIX_ZHX:1.11638871109;PDX1:1.07533721399;CDX1,2,4:0.981074772004;HIF1A:0.918469427304;ZNF148:0.884125432389;XCPE1{core}:0.869905682944;ELK1,4_GABP{A,B1}:0.860203653807;EN1,2:0.803534820594;bHLH_family:0.772152479283;IRF7:0.717869182648;EVI1:0.629142985514;AHR_ARNT_ARNT2:0.619355259339;STAT5{A,B}:0.613435003593;IRF1,2:0.587011107453;LHX3,4:0.573404595698;ZNF384:0.536108415396;CRX:0.527920942253;TEAD1:0.525022680293;ONECUT1,2:0.516000183397;RXR{A,B,G}:0.506925493474;T:0.499179035627;XBP1:0.497281929918;TBX4,5:0.467953200043;FOXM1:0.450423290094;FOXP1:0.435107139974;MYOD1:0.412814317675;NRF1:0.386179708554;HOX{A4,D4}:0.36840809849;ZNF143:0.363398593607;PAX6:0.360438889907;STAT1,3:0.357013834792;BACH2:0.334057605502;NFE2L2:0.326077897021;VSX1,2:0.323087322135;NR3C1:0.32205605681;PAX4:0.315669952941;FOXA2:0.306336987567;NKX2-2,8:0.305463280026;ZIC1..3:0.301504951515;MYB:0.2912563905;TFDP1:0.246488473414;ATF4:0.239823041319;TFAP2B:0.239597595336;NFE2:0.230731996583;TEF:0.224935840569;TLX1..3_NFIC{dimer}:0.223084613928;PRRX1,2:0.205423241312;HOX{A5,B5}:0.199251404727;FOS_FOS{B,L1}_JUN{B,D}:0.178704615611;NKX3-2:0.173066577895;POU3F1..4:0.167421243868;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.166631399493;AIRE:0.164515602804;CEBPA,B_DDIT3:0.147478410878;STAT2,4,6:0.142178448758;NKX6-1,2:0.138360971847;NFKB1_REL_RELA:0.12941883888;NFY{A,B,C}:0.123518179883;EP300:0.117795014711;ZBTB16:0.115703643583;HBP1_HMGB_SSRP1_UBTF:0.11174361572;ZFP161:0.0987983323848;HSF1,2:0.097165641357;RBPJ:0.0953472034564;PAX2:0.0690200233185;RFX1:0.0669854253385;LMO2:0.0645403000875;JUN:0.0429059764744;TP53:0.0388589428724;MTE{core}:0.0361716571659;HIC1:0.031923566207;FOSL2:0.027103984201;RXRA_VDR{dimer}:0.00722252463838;TOPORS:0.0047661320313;FOXD3:-0.000917554849787;ESRRA:-0.00528841129809;GTF2A1,2:-0.00845506565488;HLF:-0.0192942976047;GFI1B:-0.0195457206177;MAZ:-0.0266227026994;POU6F1:-0.036080297948;E2F1..5:-0.0452880191908;EGR1..3:-0.0468681504756;NANOG:-0.048359185095;ARID5B:-0.0518887665464;POU1F1:-0.0623278819789;IKZF1:-0.0630207181986;HNF1A:-0.0662326185081;NFATC1..3:-0.0668733804351;NR5A1,2:-0.0672936849773;HOXA9_MEIS1:-0.0726254483461;GTF2I:-0.0752286654615;GLI1..3:-0.0856911328803;HES1:-0.0864077894033;CREB1:-0.0922043482949;SNAI1..3:-0.102258772864;ZEB1:-0.119887125732;NR6A1:-0.127758780093;PPARG:-0.135132512245;FOXP3:-0.141739507638;OCT4_SOX2{dimer}:-0.16095609703;CUX2:-0.163037374765;FOX{F1,F2,J1}:-0.168960191453;PAX8:-0.176104093184;NKX3-1:-0.177657494228;TFCP2:-0.178288264315;SOX17:-0.179059760891;ZBTB6:-0.183698610693;GATA6:-0.189797395175;ATF5_CREB3:-0.194970102435;RORA:-0.195116656565;GFI1:-0.203920290937;TAL1_TCF{3,4,12}:-0.20521521414;ZNF238:-0.212689003047;NKX2-3_NKX2-5:-0.21452832337;MEF2{A,B,C,D}:-0.214848220055;PAX3,7:-0.242211656122;SRF:-0.246807336994;FOX{I1,J2}:-0.246820879048;POU5F1:-0.254997931647;HOX{A6,A7,B6,B7}:-0.282176435658;UFEwm:-0.294231188627;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.327639992946;PATZ1:-0.333777961852;RREB1:-0.348988293944;TFAP2{A,C}:-0.354322393211;DBP:-0.355904159768;ATF6:-0.356510942171;HNF4A_NR2F1,2:-0.357763478856;FOXL1:-0.378353800004;NFIX:-0.380318235664;LEF1_TCF7_TCF7L1,2:-0.391146382168;ELF1,2,4:-0.396955648947;HAND1,2:-0.420732314464;IKZF2:-0.430686453758;SPIB:-0.430812097126;FOX{D1,D2}:-0.442761750096;POU2F1..3:-0.443595810767;CDC5L:-0.447783416028;MYBL2:-0.46071349802;DMAP1_NCOR{1,2}_SMARC:-0.470733090509;FOXN1:-0.471213706155;ALX1:-0.481750564151;REST:-0.491960143896;RFX2..5_RFXANK_RFXAP:-0.495765931869;PAX1,9:-0.52415434186;RUNX1..3:-0.526080501894;MAFB:-0.535383785808;SOX2:-0.537070648786;ETS1,2:-0.547526039966;PBX1:-0.551082817164;GCM1,2:-0.552618859088;PAX5:-0.564958141969;ZNF423:-0.576929153609;BREu{core}:-0.578544732787;MZF1:-0.599143390659;EBF1:-0.626109179926;NFE2L1:-0.631396154363;MTF1:-0.665108475682;SOX5:-0.672400091955;NR1H4:-0.67357798375;SPI1:-0.68176309145;SOX{8,9,10}:-0.707326717437;SMAD1..7,9:-0.710452631596;AR:-0.72357640339;KLF4:-0.745321447223;SREBF1,2:-0.771114341277;ALX4:-0.799957434933;NFIL3:-0.803412044559;PRDM1:-0.824478642929;TBP:-0.832382778956;TFAP4:-0.868429578363;NKX2-1,4:-0.881691134765;TLX2:-0.88938102582;GZF1:-0.946557630775;GATA4:-0.967126022539;NHLH1,2:-0.978613257159;ATF2:-0.996759613503;MED-1{core}:-1.06921078758;HMX1:-1.08394677839;MYFfamily:-1.08808056142;BPTF:-1.11993372314;FOXO1,3,4:-1.19049796932;TGIF1:-1.23059246305;ESR1:-1.24506691522;YY1:-1.30404013092;NANOG{mouse}:-1.68845706401;SPZ1:-1.760428143
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10493-107B7;search_select_hide=table117:FF:10493-107B7
}}
}}

Latest revision as of 14:27, 3 June 2020

Name:mesothelioma cell line:ACC-MESO-1
Species:Human (Homo sapiens)
Library ID:CNhs11263
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuemesothelium
dev stageNA
sexfemale
age61
cell typemesothelial cell
cell lineACC-MESO-1
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005627
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11263 CAGE DRX007936 DRR008808
Accession ID Hg19

Library idBAMCTSS
CNhs11263 DRZ000233 DRZ001618
Accession ID Hg38

Library idBAMCTSS
CNhs11263 DRZ011583 DRZ012968
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0876
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.104
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0554
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.282
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0721
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.123
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.266
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0183
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.00998
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.0377
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.168
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.0765
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.248
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.285
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11263

Jaspar motifP-value
MA0002.20.167
MA0003.10.64
MA0004.10.483
MA0006.10.668
MA0007.10.823
MA0009.10.58
MA0014.10.0946
MA0017.10.977
MA0018.20.344
MA0019.10.429
MA0024.10.532
MA0025.10.432
MA0027.10.778
MA0028.11.57527e-4
MA0029.10.0324
MA0030.10.0735
MA0031.10.946
MA0035.20.00726
MA0038.10.0354
MA0039.21.65383e-4
MA0040.10.992
MA0041.10.701
MA0042.10.722
MA0043.10.27
MA0046.10.815
MA0047.20.313
MA0048.10.175
MA0050.15.22881e-8
MA0051.19.58328e-9
MA0052.10.616
MA0055.15.41455e-7
MA0057.10.599
MA0058.10.829
MA0059.10.374
MA0060.14.88808e-7
MA0061.10.568
MA0062.22.65946e-4
MA0065.20.811
MA0066.10.944
MA0067.10.45
MA0068.10.0341
MA0069.10.232
MA0070.10.783
MA0071.10.483
MA0072.10.602
MA0073.10.617
MA0074.10.127
MA0076.11.95397e-5
MA0077.10.281
MA0078.10.372
MA0079.20.358
MA0080.23.28273e-10
MA0081.10.022
MA0083.10.516
MA0084.10.16
MA0087.10.123
MA0088.10.438
MA0090.10.00511
MA0091.10.136
MA0092.10.0726
MA0093.10.365
MA0099.22.94515e-6
MA0100.10.493
MA0101.10.0125
MA0102.20.0301
MA0103.10.09
MA0104.20.192
MA0105.10.155
MA0106.10.718
MA0107.10.00625
MA0108.20.0296
MA0111.10.278
MA0112.20.0362
MA0113.10.905
MA0114.10.623
MA0115.10.156
MA0116.10.00977
MA0117.10.872
MA0119.10.303
MA0122.10.634
MA0124.10.844
MA0125.10.734
MA0131.10.118
MA0135.10.0277
MA0136.15.29478e-7
MA0137.20.164
MA0138.20.00317
MA0139.10.866
MA0140.10.00719
MA0141.10.638
MA0142.10.294
MA0143.10.457
MA0144.10.944
MA0145.10.327
MA0146.10.235
MA0147.10.145
MA0148.10.574
MA0149.10.0378
MA0150.10.0269
MA0152.10.746
MA0153.10.857
MA0154.10.00896
MA0155.10.516
MA0156.10.86
MA0157.10.468
MA0159.10.577
MA0160.10.225
MA0162.10.93
MA0163.10.0126
MA0164.10.345
MA0258.10.271
MA0259.10.0766



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11263

Novel motifP-value
10.741
100.319
1000.178
1010.0558
1020.592
1030.327
1040.79
1050.886
1060.00231
1070.153
1080.269
1090.178
110.217
1100.928
1110.156
1120.00776
1130.186
1140.957
1150.561
1160.2
1170.544
1180.0562
1190.602
120.584
1200.655
1210.516
1220.177
1230.785
1240.544
1250.167
1260.545
1270.33
1280.0289
1290.94
130.212
1300.579
1310.392
1320.658
1330.0987
1340.183
1350.137
1360.0292
1370.236
1380.306
1390.458
140.239
1400.0559
1410.722
1420.078
1430.658
1440.852
1450.00483
1460.934
1470.664
1480.646
1490.16
150.227
1500.334
1510.356
1520.352
1530.463
1540.235
1550.214
1560.337
1570.589
1580.784
1590.194
160.213
1600.174
1610.967
1620.624
1630.919
1640.32
1650.517
1660.662
1670.656
1680.254
1690.888
170.461
180.727
190.177
20.307
200.0251
210.752
220.652
230.22
240.829
250.217
260.353
270.254
280.202
290.391
30.285
300.982
310.314
320.00281
330.85
340.361
350.00132
360.118
370.842
380.33
390.977
40.565
400.0562
410.149
420.0504
430.85
440.108
450.56
460.0698
470.982
480.896
490.445
50.373
500.245
510.237
520.897
530.447
540.251
550.944
560.42
570.656
580.283
590.0327
60.354
600.0839
610.00286
620.0767
630.629
640.68
650.685
664.49061e-7
670.738
680.0729
690.36
70.559
700.816
710.464
720.696
730.227
740.765
750.266
760.245
770.23
780.726
790.13
80.396
800.278
810.331
820.378
830.241
840.431
850.34
860.155
870.15
880.71
890.25
90.089
900.698
910.113
920.945
930.589
940.975
950.338
960.997
970.137
980.0908
990.6



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11263


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000151 (secretory cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000150 (glandular epithelial cell)
0000163 (endocrine cell)
0000215 (barrier cell)
0000174 (steroid hormone secreting cell)
0000255 (eukaryotic cell)
0000077 (mesothelial cell)
0002097 (cortical cell of adrenal gland)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
305 (carcinoma)
170 (endocrine gland cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002369 (adrenal gland)
0002100 (trunk)
0001851 (cortex)
0001235 (adrenal cortex)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002368 (endocrine gland)
0005177 (trunk region element)
0005172 (abdomen element)
0002530 (gland)
0006858 (adrenal/interrenal gland)
0010317 (germ layer / neural crest derived structure)
0005173 (abdominal segment element)
0002417 (abdominal segment of trunk)
0000949 (endocrine system)
0000916 (abdomen)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0102219 (adrenocortical carcinoma cell)
0102424 (mesothelioma cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000222 (mesodermal cell)

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