FFCP PHASE1:Hg19::chr11:108800302..108800338,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:108800302..108800338,+ to FFCP PHASE1:Hg19::chr11:108800302..108800338,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1662 | |EntrezGene=1662 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2735 | |HGNC=2735 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_ENST00000534221_5end | |||
|cluster_id=chr11:108800302..108800338,+ | |||
|coexpression_cluster_id=C2093 | |||
|description=CAGE_peak_2_at_DDX10_5end | |||
|id=chr11:108800302..108800338,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.41e-24!679;CL:0000004!2.41e-24!679;CL:0000255!2.41e-24!679;CL:0000012!1.02e-23!682;CL:0000055!1.63e-23!180;CL:0002371!6.50e-23!591;CL:0000144!7.24e-23!625;CL:0000220!2.20e-19!246;CL:0002321!7.92e-19!248;CL:0000003!9.76e-17!722;CL:0000222!3.18e-16!119;CL:0000680!4.11e-14!57;CL:0000056!4.11e-14!57;CL:0000355!4.11e-14!57;CL:0000187!7.34e-13!54;CL:0000183!1.52e-12!59;CL:0000393!2.65e-12!60;CL:0000211!2.65e-12!60;CL:0000192!4.76e-12!42;CL:0000514!4.76e-12!42;CL:0000057!2.07e-11!75;CL:0000359!1.38e-10!32;CL:0002620!1.29e-09!23;CL:0000723!1.68e-08!436;CL:0000048!4.04e-08!430;CL:0000034!1.84e-07!444;CL:0002139!4.94e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.02e-11;32!CL:0002620;3.16e-10;23!CL:0000860;1.64e-09;33!CL:0002057;1.64e-09;33!CL:0000192;4.44e-09;43!CL:0002539;2.81e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.86e-11,43;CL:0000514,1.86e-11,43;CL:0000359,3.62e-11,32;CL:0000222,4.29e-11,121;CL:0002620,3.35e-10,23;CL:0000680,7.07e-10,58;CL:0000056,7.07e-10,58;CL:0000355,7.07e-10,58;CL:0002321,1.52e-09,250;CL:0000187,4.40e-09,55;CL:0000393,9.28e-09,61;CL:0000211,9.28e-09,61;CL:0000723,2.99e-08,433;CL:0000048,4.22e-08,427;CL:0000034,1.56e-07,441;CL:0002539,2.47e-07,10;CL:0000057,6.55e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;4.44e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.49e-07;5!DOID:450;7.49e-07;5!DOID:66;7.49e-07;5!DOID:423;7.49e-07;5!DOID:0080000;7.49e-07;5!DOID:11722;7.49e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.35e-07,5;DOID:450,7.35e-07,5;DOID:66,7.35e-07,5;DOID:423,7.35e-07,5;DOID:0080000,7.35e-07,5;DOID:11722,7.35e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002049!8.70e-16!79;UBERON:0007798!8.70e-16!79;UBERON:0001637!7.31e-15!42;UBERON:0003509!7.31e-15!42;UBERON:0004572!7.31e-15!42;UBERON:0000914!2.11e-14!83;UBERON:0002329!2.11e-14!83;UBERON:0003077!2.11e-14!83;UBERON:0003059!2.11e-14!83;UBERON:0007282!2.11e-14!83;UBERON:0009618!2.11e-14!83;UBERON:0007285!2.11e-14!83;UBERON:0004573!2.24e-14!33;UBERON:0004571!2.24e-14!33;UBERON:0004290!5.86e-13!70;UBERON:0000490!9.72e-13!138;UBERON:0001981!1.67e-12!60;UBERON:0007500!1.67e-12!60;UBERON:0004537!1.67e-12!60;UBERON:0006965!1.67e-12!60;UBERON:0000055!4.87e-12!69;UBERON:0001134!5.07e-12!61;UBERON:0002036!5.07e-12!61;UBERON:0003082!5.07e-12!61;UBERON:0004872!1.97e-11!84;UBERON:0004535!1.98e-11!110;UBERON:0002385!4.25e-11!63;UBERON:0001015!4.25e-11!63;UBERON:0000383!4.25e-11!63;UBERON:0001009!1.64e-10!113;UBERON:0005256!2.51e-10!143;UBERON:0003914!5.99e-10!118;UBERON:0000486!9.02e-10!82;UBERON:0002204!9.90e-10!167;UBERON:0000467!3.29e-09!625;UBERON:0000480!4.51e-09!626;UBERON:0000947!6.65e-08!21;UBERON:0010191!6.65e-08!21;UBERON:0000468!1.57e-07!659;UBERON:0000926!3.49e-07!448;UBERON:0004120!3.49e-07!448;UBERON:0006603!3.49e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.52e-14;33!UBERON:0004571;1.52e-14;33!UBERON:0001637;9.94e-12;42!UBERON:0003509;9.94e-12;42!UBERON:0004572;9.94e-12;42!UBERON:0001135;6.06e-08;15!UBERON:0000947;2.00e-07;21!UBERON:0010191;2.00e-07;21!UBERON:0004237;2.81e-07;10!UBERON:0004695;2.81e-07;10!UBERON:0002111;2.81e-07;10!UBERON:0004178;2.81e-07;10!UBERON:0007500;3.57e-07;56!UBERON:0001981;3.57e-07;56!UBERON:0004537;3.57e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,5.12e-16,33;UBERON:0004571,5.12e-16,33;UBERON:0001637,7.70e-16,42;UBERON:0003509,7.70e-16,42;UBERON:0004572,7.70e-16,42;UBERON:0002049,5.05e-13,78;UBERON:0007798,5.05e-13,78;UBERON:0007500,9.44e-11,59;UBERON:0001981,9.44e-11,59;UBERON:0004537,9.44e-11,59;UBERON:0006965,9.44e-11,59;UBERON:0000055,1.18e-10,68;UBERON:0007503,4.31e-10,78;UBERON:0004535,5.92e-10,109;UBERON:0002329,2.13e-09,71;UBERON:0003059,2.13e-09,71;UBERON:0007282,2.13e-09,71;UBERON:0004290,2.13e-09,71;UBERON:0009618,2.13e-09,71;UBERON:0002204,2.56e-09,167;UBERON:0001009,2.59e-09,112;UBERON:0004872,2.80e-09,83;UBERON:0003077,4.03e-09,72;UBERON:0007285,4.03e-09,72;UBERON:0000490,4.42e-09,148;UBERON:0003914,6.85e-09,117;UBERON:0007524,7.47e-09,73;UBERON:0001134,1.25e-08,62;UBERON:0002036,1.25e-08,62;UBERON:0003082,1.25e-08,62;UBERON:0002385,4.49e-08,64;UBERON:0001015,4.49e-08,64;UBERON:0000383,4.49e-08,64;UBERON:0001135,5.31e-08,15;UBERON:0000947,1.78e-07,21;UBERON:0010191,1.78e-07,21;UBERON:0004237,2.47e-07,10;UBERON:0004695,2.47e-07,10;UBERON:0002111,2.47e-07,10;UBERON:0004178,2.47e-07,10;UBERON:0000926,3.18e-07,315;UBERON:0004120,3.18e-07,315;UBERON:0006603,3.18e-07,315;UBERON:0003081,5.53e-07,203;UBERON:0005256,7.33e-07,122 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,1.72013755551056,0,0,0,15.842093178886,8.61633176892581,0.672325146451775,1.20538905604795,1.46062018077475,1.95173119516203,0.984968464614303,1.42800483870977,0,1.71741592278634,4.10623275218653,0.376627918784408,0,0,0,0,0,0,0.919421224478927,0.30120591877825,19.227208528673,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,1.39457422143411,2.87817521615278,4.95530193432166,2.01384674625505,1.5369642391746,3.78371567821736,1.37898272294647,3.87290810150296,1.35426486594342,1.12945403725563,1.91034305040492,2.47195832889593,3.67300670845083,6.41858054152187,0.639337125799041,0.659702600373432,0.598390972864896,1.27867425159808,13.0594157382863,23.2627942123367,18.0618452208717,2.00998932205395,3.12889751052121,2.6062661364614,12.7133895553007,13.2579948955523,14.5572698222807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.255725123687061,1.0843174571537,1.50401373190767,5.5041677205113,0,0.973269740605272,1.13441780596881,0.221729397462564,0.614843499851882,0,0.728590576585084,0.741568885568859,0,0,0,0,0,0,11.1306948125355,3.4409383804245,2.77712401286075,0.56530794192401,5.45349267072878,5.22724279686128,1.67195973229448,1.55050055501597,0.35576626268671,1.67360306382335,2.41697590265488,5.32190474002959,0.488124115096339,3.67663080345869,0,0.625098097988558,0.673588117878509,0.450445921933289,1.53316637465883,0.949265659568129,0.732806975721629,0,0,0,0,0.506522046658319,4.237093786023,0.860509862246441,1.41867352879343,0,0,0.98667019366864,0.622422070799533,8.08264032418128,4.57693328717684,2.72443369760877,8.06646294271999,36.3198219342385,0.312160076830321,1.71141546463335,0,1.64408298101271,2.42809416552197,0.280901613404497,17.148950385411,0.245668634623536,5.57959218349133,0,0.741800787835671,0,0,0.673344455816265,0.875829639103749,7.48073111807294,0.438977620880838,0,0.150238058906597,1.13432183160021,27.6260038960847,62.5723149238403,6.78182083710598,33.0100205692843,47.7133210373972,8.50213782150576,5.3973888336161,3.20675031258406,1.07180705677318,17.4179304228439,41.1463046931078,0.161646056818812,83.0722446488878,82.9189768413479,12.2083626463551,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0,2.76269842704961,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,3.08822058537346,0.109750285408626,10.1161577931858,0.904760751704678,1.11106134190236,9.77424915930974,1.03993478527958,1.44331342025273,7.88326753830522,0.117408694235822,1.73239737313289,0,1.90254152234598,0,0,0,0,0,10.3107217385455,0.335964256397719,0.425325291727159,2.14940454486836,3.48760726216754,0.383382679165211,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,21.6412992786546,3.05172048183296,34.9823623365932,0.904902010304444,0,0,0.26593811658487,0,1.54324424557285,0,4.52917704327369,33.3138725223484,0,0,0,24.5220444632357,8.71147060226772,0,0,0,0,0,0,2.39624855491583,0,0,8.97644101338991,6.36976599906189,0.895304816199478,0,0,0,0,0.254094624222463,1.30139853857622,3.09315525111078,3.51784157202132,0.637938751653163,0,0,0,1.71768088406796,0.500170521059677,32.5518028439683,0,0.178428988797162,0.315404830067869,0.819989904948992,0.300946099727719,0,1.03473071292505,5.97803038681893,2.76553752812555,0.0868836144680828,0.783204629850962,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.306923946576125,0,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0.177561725313127,1.47828880824856,23.8857037424466,0.929683027679674,0,0.40101294060657,16.6666589973972,5.1666501674073,0.910455840033585,0.917870904715969,0.902399225814824,0.308061348417659,0,0,0.105551628892876,1.13733384070897,5.95327968467805,1.94324324491925,1.54227252690289,0.270946437543853,0,0.509752546090077,0,0,0,0,0,0,0.325378394664303,0,0,0,0,1.30012049207304,0,0.870036464629098,0.308097234229289,0.307007349452259,1.10269257987624,0.214840489736547,0.145016693914229,0.596586391912706,0.0890320356467374,29.7512847649761,15.1830153218434,2.04180339991335,21.1419761988099,19.9883586197833,14.4813679542094,16.0318572136938,8.93297382510658,7.45228442443831,25.2280567701771,1.11194531462352,6.01124524316363,1.86079184679834,0.316379424718726,0.38126038784765,0.255897791311334,0,7.95508119814842,2.35484592059769,4.49681143958287,12.3541663381225,8.95374257827217,6.46983941034611,68.1594381043935,6.7401352998237,0.48763373908959,7.55511817856982,6.33900880540533,0.136499911407986,33.2302765091225,1.13008116620243,18.1950563370221,9.95158462861829,6.13831239355268,0,0,0.405820753925408,0,0.563391205064483,0,0,0,2.48332744849418,0.633322905892992,0,7.96893664908002,6.29882496440969,15.3955380360819,2.68120910214315,5.44454924306613,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,1.8922479853894,0,0,0,0,0,39.8847861758404,0,0,1.07842021376792,83.9609309228607,0,0,0,3.33410970433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| ||
|short_description=p2@DDX10 | |||
}} | }} |
Latest revision as of 00:17, 25 September 2015
Short description: | p2@DDX10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DDX10_5end |
Coexpression cluster: | C2093_mesenchymal_mucinous_bile_Fibroblast_lung_Smooth_liposarcoma |
Association with transcript: | 56bp_to_ENST00000534221_5end |
EntrezGene: | DDX10 |
HGNC: | 2735 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.86e-11 | 43 |
smooth muscle myoblast | 1.86e-11 | 43 |
vascular associated smooth muscle cell | 3.62e-11 | 32 |
mesodermal cell | 4.29e-11 | 121 |
skin fibroblast | 3.35e-10 | 23 |
muscle precursor cell | 7.07e-10 | 58 |
myoblast | 7.07e-10 | 58 |
multi-potent skeletal muscle stem cell | 7.07e-10 | 58 |
embryonic cell | 1.52e-09 | 250 |
muscle cell | 4.40e-09 | 55 |
electrically responsive cell | 9.28e-09 | 61 |
electrically active cell | 9.28e-09 | 61 |
somatic stem cell | 2.99e-08 | 433 |
multi fate stem cell | 4.22e-08 | 427 |
stem cell | 1.56e-07 | 441 |
aortic smooth muscle cell | 2.47e-07 | 10 |
fibroblast | 6.55e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.35e-07 | 5 |
myotonic disease | 7.35e-07 | 5 |
muscle tissue disease | 7.35e-07 | 5 |
myopathy | 7.35e-07 | 5 |
muscular disease | 7.35e-07 | 5 |
myotonic dystrophy | 7.35e-07 | 5 |