FFCP PHASE1:Hg19::chr11:123301202..123301218,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:123301202..123301218,+ to FFCP PHASE1:Hg19::chr11:123301202..123301218,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=E9PS84 | |UniProt=E9PS84 | ||
|association_with_transcript=144bp_to_ENST00000533341,uc001pyu.2_5end | |||
|cluster_id=chr11:123301202..123301218,+ | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_7_at_ENST00000533341_5end,CAGE_peak_7_at_uc001pyu.2_5end | |||
|id=chr11:123301202..123301218,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.84e-23!119;CL:0000738!1.65e-22!140;CL:0000988!7.81e-20!182;CL:0002031!8.36e-20!124;CL:0000037!3.99e-19!172;CL:0000566!3.99e-19!172;CL:0000860!2.25e-18!45;CL:0002057!2.14e-16!42;CL:0002032!2.24e-16!165;CL:0000837!2.24e-16!165;CL:0002194!1.64e-14!63;CL:0000576!1.64e-14!63;CL:0000040!1.64e-14!63;CL:0000559!1.64e-14!63;CL:0000766!2.50e-14!76;CL:0002009!1.44e-13!65;CL:0000557!2.62e-13!71;CL:0000839!1.10e-12!70;CL:0000084!5.32e-11!25;CL:0000827!5.32e-11!25;CL:0000791!1.65e-10!18;CL:0000789!1.65e-10!18;CL:0002420!1.65e-10!18;CL:0002419!1.65e-10!18;CL:0000790!1.65e-10!18;CL:0000763!5.25e-09!112;CL:0000049!5.25e-09!112;CL:0000838!2.26e-08!52;CL:0000542!5.15e-08!53;CL:0000051!5.15e-08!53;CL:0000134!4.58e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000624;1.05e-14;6!CL:0000791;3.00e-14;18!CL:0000789;3.00e-14;18!CL:0002419;3.00e-14;18!CL:0000784;4.28e-12;3!CL:0000084;5.65e-12;25!CL:0000767;1.35e-11;3!CL:0000623;1.47e-10;3!CL:0000094;3.34e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.88e-17,136;CL:0000988,7.30e-16,177;CL:0000037,7.62e-15,168;CL:0000624,1.14e-14,6;CL:0000791,4.14e-14,18;CL:0000789,4.14e-14,18;CL:0002420,4.14e-14,18;CL:0002419,4.14e-14,18;CL:0000790,4.14e-14,18;CL:0002087,4.54e-13,115;CL:0000784,4.31e-12,3;CL:0000084,8.07e-12,25;CL:0000827,8.07e-12,25;CL:0000767,1.16e-11,3;CL:0002032,2.89e-11,161;CL:0000837,2.89e-11,161;CL:0002031,4.63e-11,120;CL:0000623,1.50e-10,3;CL:0000825,1.50e-10,3;CL:0000838,3.86e-08,52;CL:0000766,4.59e-08,72;CL:0000542,6.20e-08,53;CL:0000051,6.20e-08,53;CL:0000860,2.63e-07,42;CL:0002057,2.63e-07,42;CL:0000094,3.25e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;3.00e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.02e-16!102;UBERON:0003061!7.02e-16!102;UBERON:0002193!4.51e-15!112;UBERON:0001474!1.33e-12!86;UBERON:0002371!2.82e-12!80;UBERON:0002405!4.39e-10!115;UBERON:0004765!8.22e-10!101;UBERON:0001434!8.22e-10!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.77e-08;2!UBERON:0005058;2.77e-08;2!UBERON:0009113;2.77e-08;2!UBERON:0001905;1.03e-07;2!UBERON:0002757;1.03e-07;2!UBERON:0010134;1.03e-07;2!UBERON:0005408;1.03e-07;2!UBERON:0001899;1.03e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.74e-10,98;UBERON:0003061,8.74e-10,98;UBERON:0003351,1.43e-09,6;UBERON:0002370,6.81e-09,4;UBERON:0005058,6.81e-09,4;UBERON:0009113,6.81e-09,4;UBERON:0003295,6.81e-09,4;UBERON:0005562,6.81e-09,4;UBERON:0002193,1.94e-08,108;UBERON:0001905,8.73e-08,2;UBERON:0002757,8.73e-08,2;UBERON:0010134,8.73e-08,2;UBERON:0005408,8.73e-08,2;UBERON:0001899,8.73e-08,2;UBERON:0002405,2.74e-07,93 | |||
|phase1_expression=0,0.642301571672949,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0.382067028739756,0.57470412614962,0.393553906568396,2.75354993794233,3.45446458287491,3.2511385896376,0,0,0,0,0,1.46800219667424,0,0.200544447470142,0.868043482863407,0.447830948479849,0.971680998056939,0.77272670290256,0.145398238779565,1.51150377475524,0.242584061187816,0,0.822335776043652,0.929119112685311,0.575384784644301,1.2808035326455,0.709446689665756,0,0,0,0.564727018627814,0.545812300115692,0.898893937780338,0.306083892370903,1.92557416245656,0.639337125799041,0.659702600373432,1.39624560335142,2.13112375266347,0,0.56738522469114,0.622822248995575,0.502497330513487,1.5644487552606,2.38907729175628,0,0.736555271975129,0.316462387440884,1.47878700418359,0.637812899895131,1.46761051855863,0.44931452458598,0.600707571366025,0.48217676009124,2.28010194992999,0.99458338599545,1.82664153764634,0,0,0,0,0,0,0,0,0,0,0,0,2.80254281490768,0.790152254325231,1.37696839079683,2.35806457649499,5.96244347098577,0.334372990781356,0.651844533267181,1.89379122293893,1.94826728407911,1.55974639639243,2.3568472597987,0.886135578334485,0.812411591295047,0.896639238079726,0.390178042679635,2.46656856905514,0.829050053357545,1.15921234294021,1.33457906845854,1.87278579662799,0,1.58633079776593,4.21542542962113,2.40539211837841,3.28925599625354,0.637130828648193,0.651083453856419,0,0.903450714466637,0.639933055772092,1.24930726552346,0.473554504088034,0,5.44338206706778,2.13952156626806,2.17236605824198,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,22.1796280603968,15.4438625910635,21.9159925784443,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0.805658634218294,0,0,0,0,0.0892997282840798,0.22452937262617,0.450445921933289,0,0,0.183201743930407,1.31780417436063,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0.404132016209064,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0.300476117813194,0.113432183160021,0.358779271377724,0,0,0.600182192168805,0.103052529238439,0.515281080091258,0,0.506328996723799,0.0974370051611986,0.504867548488229,0,0.161646056818812,0,0.302256294682921,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.354920400119532,0.168584690078102,0.241011029883482,0.220587945464788,0,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0.336393253036082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.716243852959582,0.112085143993527,2.95546140302891,1.2937654491571,1.28343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0.620304078368662,0.431428401637234,3.62873696531711,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0.308419387605311,0,0.246381468041427,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0.532306030317022,0.869932992075073,0,0,0,0,0,0,0,0.95460974377781,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0,0,0,0,0.213648142254946,0,0,0,0.432807638929335,0,0.318852545457645,0.798317485731266,0,0.211673582723883,0,0,0.912938716132769,0.313359791546046,0,0,0,0.201799707191048,0.425846237690326,0.343505344755765,0,0.447352215784832,0.166849141711909,0.390776190804081,0,0,0,0,0,0,0,0,1.22587722705226,0,0,0,0,0,0,0.222617410045812,0.16480387422676,0,0,0.276283915531148,0.251932747854276,0.102268682502155,0.123084805461069,0,0,0,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0.472775363535873,0,0.583209226766509,0,0,0,0,0.221158519862449,0.295547618953547,0.219385397153973,0.32681539055697,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,1.23563938946503,1.98401704060365,0.269604531922708,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0.751617097072463,0.207376382794494,1.32930774541437,0.330991955875499,0,1.19472429772959,0,0,0,0,0,0.17472666824203,0,0.774050650312681,1.0232504392066,1.14961639874493,0,0,0.451961481561065,0.274083849293502,0,0,0.195551382734803,0,0.213452994739353,0.19980960958213,0,0,0,0.288109595976299,0,0.471388069233591,0,0,0,0,0,0,2.55493176133945,0,0.262887354279314,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.508039992394707,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.209818352539992,0,0.896436696664224,0,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0.1133120915201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| 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| ||
|short_description=p7@ENST00000533341,p7@uc001pyu.2 | |||
}} | }} |
Latest revision as of 09:28, 16 September 2015
Short description: | p7@ENST00000533341, p7@uc001pyu.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ENST00000533341_5end, CAGE_peak_7_at_uc001pyu.2_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 144bp_to_ENST00000533341, uc001pyu.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.88e-17 | 136 |
hematopoietic cell | 7.30e-16 | 177 |
hematopoietic stem cell | 7.62e-15 | 168 |
CD4-positive, alpha-beta T cell | 1.14e-14 | 6 |
mature alpha-beta T cell | 4.14e-14 | 18 |
alpha-beta T cell | 4.14e-14 | 18 |
immature T cell | 4.14e-14 | 18 |
mature T cell | 4.14e-14 | 18 |
immature alpha-beta T cell | 4.14e-14 | 18 |
nongranular leukocyte | 4.54e-13 | 115 |
plasmacytoid dendritic cell | 4.31e-12 | 3 |
T cell | 8.07e-12 | 25 |
pro-T cell | 8.07e-12 | 25 |
basophil | 1.16e-11 | 3 |
hematopoietic oligopotent progenitor cell | 2.89e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.89e-11 | 161 |
hematopoietic lineage restricted progenitor cell | 4.63e-11 | 120 |
natural killer cell | 1.50e-10 | 3 |
pro-NK cell | 1.50e-10 | 3 |
lymphoid lineage restricted progenitor cell | 3.86e-08 | 52 |
myeloid leukocyte | 4.59e-08 | 72 |
lymphocyte | 6.20e-08 | 53 |
common lymphoid progenitor | 6.20e-08 | 53 |
classical monocyte | 2.63e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.63e-07 | 42 |
granulocyte | 3.25e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.74e-10 | 98 |
blood island | 8.74e-10 | 98 |
pharyngeal epithelium | 1.43e-09 | 6 |
thymus | 6.81e-09 | 4 |
hemolymphoid system gland | 6.81e-09 | 4 |
thymic region | 6.81e-09 | 4 |
pharyngeal gland | 6.81e-09 | 4 |
thymus primordium | 6.81e-09 | 4 |
hemolymphoid system | 1.94e-08 | 108 |
pineal body | 8.73e-08 | 2 |
regional part of epithalamus | 8.73e-08 | 2 |
secretory circumventricular organ | 8.73e-08 | 2 |
circumventricular organ | 8.73e-08 | 2 |
epithalamus | 8.73e-08 | 2 |
immune system | 2.74e-07 | 93 |