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{{f5samples
{{f5samples
|DRA_sample_Accession=CAGE@SAMD00005519
|DRA_sample_Accession=CAGE@SAMD00005519
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005519
|HumanCAGEScanFiles=NCig10038;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor0.NCig10038.11207-116A1.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor0.NCig10038.11207-116A1.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor0.NCig10038.11207-116A1.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor0.NCig10038.11207-116A1.hg19.GCTATA.pairs.bed.gz
|HumanCAGEScanFiles=NCig10038;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor0.NCig10038.11207-116A1.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor0.NCig10038.11207-116A1.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor0.NCig10038.11207-116A1.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor0.NCig10038.11207-116A1.hg19.GCTATA.pairs.bed.gz
|accession_numbers=CAGE;DRX008216;DRR009088;DRZ000513;DRZ001898;DRZ011863;DRZ013248
|accession_numbers=CAGE;DRX008216;DRR009088;DRZ000513;DRZ001898;DRZ011863;DRZ013248
|accession_numbers_RNASeq=sRNA-Seq;DRX037013;DRR041379;DRZ007021
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000947,UBERON:0001637,UBERON:0000483,UBERON:0000479,UBERON:0000055,UBERON:0004111,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0000490,UBERON:0006914,UBERON:0004573,UBERON:0000487,UBERON:0003509,UBERON:0004638,UBERON:0003915,UBERON:0004700,UBERON:0007500,UBERON:0001981,UBERON:0002049,UBERON:0001986,UBERON:0010317,UBERON:0007798,UBERON:0004852,UBERON:0001917,UBERON:0004535,UBERON:0004571,UBERON:0010191,UBERON:0004572,UBERON:0004537,UBERON:0001009
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000947,UBERON:0001637,UBERON:0000483,UBERON:0000479,UBERON:0000055,UBERON:0004111,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0000490,UBERON:0006914,UBERON:0004573,UBERON:0000487,UBERON:0003509,UBERON:0004638,UBERON:0003915,UBERON:0004700,UBERON:0007500,UBERON:0001981,UBERON:0002049,UBERON:0001986,UBERON:0010317,UBERON:0007798,UBERON:0004852,UBERON:0001917,UBERON:0004535,UBERON:0004571,UBERON:0010191,UBERON:0004572,UBERON:0004537,UBERON:0001009
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000076,CL:0002139,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0000071,CL:1000413,CL:0002544
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000076,CL:0002139,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0000071,CL:1000413,CL:0002544
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|rna_tube_id=116A1
|rna_tube_id=116A1
|rna_weight_ug=25
|rna_weight_ug=25
|rnaseq_library_id=SRhi10003.TGACCA
|sample_age=
|sample_age=
|sample_category=primary cells
|sample_category=primary cells
Line 104: Line 107:
|top_motifs=SOX{8,9,10}:1.95206185597;NFATC1..3:1.32395005182;SOX2:1.24390842708;RXR{A,B,G}:1.17150101813;ELF1,2,4:1.07752730354;SOX5:1.06398591378;FOX{I1,J2}:1.05943654225;POU3F1..4:1.0282875008;GATA6:1.00565210104;TLX1..3_NFIC{dimer}:0.967999008093;PAX6:0.948385935036;HBP1_HMGB_SSRP1_UBTF:0.832239425385;ETS1,2:0.806967774737;CRX:0.791119828517;TFDP1:0.762054502617;PAX8:0.756806659672;NANOG:0.732217225491;TFAP4:0.701241971642;AR:0.644084665528;ADNP_IRX_SIX_ZHX:0.609586772378;IKZF1:0.601053677276;PAX1,9:0.593731848669;bHLH_family:0.591447338388;MYB:0.583406934718;XCPE1{core}:0.573998209265;SOX17:0.573522121938;LHX3,4:0.568326333661;SPIB:0.546896979861;TP53:0.545102711302;ZNF148:0.540178655429;GFI1B:0.538329425126;LEF1_TCF7_TCF7L1,2:0.524689310324;PBX1:0.523017596385;GTF2A1,2:0.492799810745;NFE2:0.454234620929;NFE2L2:0.425444335926;NFY{A,B,C}:0.417065841193;HAND1,2:0.39883775652;ALX1:0.393091262646;TFAP2{A,C}:0.390489334675;E2F1..5:0.380067993147;ZFP161:0.378792309639;HES1:0.370573636713;BACH2:0.370135650248;HOX{A5,B5}:0.36785401366;ONECUT1,2:0.363932719603;FOS_FOS{B,L1}_JUN{B,D}:0.355393213051;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.31677358542;ZNF238:0.312520946778;FOXA2:0.309667034209;POU1F1:0.306834615357;YY1:0.306307457262;CDC5L:0.296269692659;NKX2-2,8:0.2642162575;GFI1:0.253637391355;PITX1..3:0.253138530151;NR3C1:0.249200356922;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.237909957499;MTE{core}:0.232703298846;ZNF143:0.231770755117;TFAP2B:0.213039800165;FOSL2:0.204391030096;IKZF2:0.194048282202;ARID5B:0.171268483938;TEAD1:0.162819831242;SP1:0.161558877623;HIC1:0.155960110527;SRF:0.152795445289;NR5A1,2:0.147866380192;RORA:0.128446409748;MYOD1:0.117169390544;STAT5{A,B}:0.0914063152586;NRF1:0.0750363713901;STAT2,4,6:0.0711058986065;NFE2L1:0.0674516989564;RBPJ:0.0649489849733;ZNF423:0.0449416984109;TBP:0.0431321253974;EN1,2:0.0426069009608;FOXM1:0.0234420570787;FOXD3:-0.00671609925218;NHLH1,2:-0.0134840988715;TLX2:-0.0216404255828;PAX2:-0.0318913532253;TAL1_TCF{3,4,12}:-0.0346062527078;POU2F1..3:-0.0357298055589;REST:-0.0463562329259;GTF2I:-0.0556076135793;CUX2:-0.0683662663468;SPI1:-0.0755323729907;HNF4A_NR2F1,2:-0.0804512781511;CEBPA,B_DDIT3:-0.0821461303834;ATF2:-0.0827606369216;ZBTB6:-0.0944149391147;MEF2{A,B,C,D}:-0.0959678332747;STAT1,3:-0.105135194579;MAZ:-0.113574695466;PAX5:-0.121351010728;EGR1..3:-0.122087588446;GLI1..3:-0.128446057796;PAX3,7:-0.142315606395;FOXL1:-0.152564484582;ESRRA:-0.163500613781;SPZ1:-0.163887666148;ELK1,4_GABP{A,B1}:-0.170388870066;HMGA1,2:-0.175168817316;NFIX:-0.177784884164;SMAD1..7,9:-0.182703052227;GATA4:-0.192063550806;HNF1A:-0.195644800714;MED-1{core}:-0.213384257275;PRDM1:-0.21341198437;ATF6:-0.219985783708;LMO2:-0.221171545999;NKX3-2:-0.224299921399;ZIC1..3:-0.238996214748;DMAP1_NCOR{1,2}_SMARC:-0.241718810028;VSX1,2:-0.247213056783;GZF1:-0.258359547631;JUN:-0.271108341177;PATZ1:-0.279163045595;PRRX1,2:-0.302486053653;HLF:-0.305001269017;GCM1,2:-0.319714657799;NFKB1_REL_RELA:-0.329546683001;TFCP2:-0.331550836696;RFX1:-0.333016778021;OCT4_SOX2{dimer}:-0.338198314643;MTF1:-0.338873254168;NANOG{mouse}:-0.343095077419;MYBL2:-0.353356420689;POU5F1:-0.355937804915;EBF1:-0.356586490934;KLF4:-0.370065554078;HSF1,2:-0.390500416769;MZF1:-0.39557420124;RUNX1..3:-0.399166638711;FOXO1,3,4:-0.405811585618;BREu{core}:-0.419789638858;SREBF1,2:-0.434093119118;EP300:-0.465487732753;PPARG:-0.473004896233;FOX{F1,F2,J1}:-0.477875760872;HIF1A:-0.4964497301;UFEwm:-0.507390402123;FOX{D1,D2}:-0.508991352341;MAFB:-0.512873564379;NKX2-3_NKX2-5:-0.516955037296;IRF1,2:-0.517968189909;IRF7:-0.523025956932;EVI1:-0.530912405129;SNAI1..3:-0.535176761859;TBX4,5:-0.58125859178;CREB1:-0.583864625279;FOXP1:-0.596623652321;ZNF384:-0.613212918346;TGIF1:-0.613729188502;RREB1:-0.61470801603;HOX{A6,A7,B6,B7}:-0.616013339456;TEF:-0.62421614943;AHR_ARNT_ARNT2:-0.625137085212;PAX4:-0.647649636176;BPTF:-0.660473247063;DBP:-0.662448786139;HMX1:-0.6948410309;HOXA9_MEIS1:-0.697038405636;NFIL3:-0.706839871844;MYFfamily:-0.712134003179;ATF4:-0.734554210612;ALX4:-0.738633614638;FOXN1:-0.755410846053;FOXQ1:-0.76641933508;ZEB1:-0.779436281274;ATF5_CREB3:-0.785629973878;AIRE:-0.80218532684;XBP1:-0.808125729968;TOPORS:-0.863750653425;POU6F1:-0.883667996602;FOXP3:-0.913138561448;ESR1:-0.927157824706;NR6A1:-0.941763332456;NR1H4:-0.999846967565;RXRA_VDR{dimer}:-1.05918493464;T:-1.07072441464;RFX2..5_RFXANK_RFXAP:-1.11967182918;HOX{A4,D4}:-1.182953808;NKX6-1,2:-1.18958273596;ZBTB16:-1.19352753515;PDX1:-1.23907049562;NKX3-1:-1.24051441062;CDX1,2,4:-1.51890610551;NKX2-1,4:-1.76804491249
|top_motifs=SOX{8,9,10}:1.95206185597;NFATC1..3:1.32395005182;SOX2:1.24390842708;RXR{A,B,G}:1.17150101813;ELF1,2,4:1.07752730354;SOX5:1.06398591378;FOX{I1,J2}:1.05943654225;POU3F1..4:1.0282875008;GATA6:1.00565210104;TLX1..3_NFIC{dimer}:0.967999008093;PAX6:0.948385935036;HBP1_HMGB_SSRP1_UBTF:0.832239425385;ETS1,2:0.806967774737;CRX:0.791119828517;TFDP1:0.762054502617;PAX8:0.756806659672;NANOG:0.732217225491;TFAP4:0.701241971642;AR:0.644084665528;ADNP_IRX_SIX_ZHX:0.609586772378;IKZF1:0.601053677276;PAX1,9:0.593731848669;bHLH_family:0.591447338388;MYB:0.583406934718;XCPE1{core}:0.573998209265;SOX17:0.573522121938;LHX3,4:0.568326333661;SPIB:0.546896979861;TP53:0.545102711302;ZNF148:0.540178655429;GFI1B:0.538329425126;LEF1_TCF7_TCF7L1,2:0.524689310324;PBX1:0.523017596385;GTF2A1,2:0.492799810745;NFE2:0.454234620929;NFE2L2:0.425444335926;NFY{A,B,C}:0.417065841193;HAND1,2:0.39883775652;ALX1:0.393091262646;TFAP2{A,C}:0.390489334675;E2F1..5:0.380067993147;ZFP161:0.378792309639;HES1:0.370573636713;BACH2:0.370135650248;HOX{A5,B5}:0.36785401366;ONECUT1,2:0.363932719603;FOS_FOS{B,L1}_JUN{B,D}:0.355393213051;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.31677358542;ZNF238:0.312520946778;FOXA2:0.309667034209;POU1F1:0.306834615357;YY1:0.306307457262;CDC5L:0.296269692659;NKX2-2,8:0.2642162575;GFI1:0.253637391355;PITX1..3:0.253138530151;NR3C1:0.249200356922;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.237909957499;MTE{core}:0.232703298846;ZNF143:0.231770755117;TFAP2B:0.213039800165;FOSL2:0.204391030096;IKZF2:0.194048282202;ARID5B:0.171268483938;TEAD1:0.162819831242;SP1:0.161558877623;HIC1:0.155960110527;SRF:0.152795445289;NR5A1,2:0.147866380192;RORA:0.128446409748;MYOD1:0.117169390544;STAT5{A,B}:0.0914063152586;NRF1:0.0750363713901;STAT2,4,6:0.0711058986065;NFE2L1:0.0674516989564;RBPJ:0.0649489849733;ZNF423:0.0449416984109;TBP:0.0431321253974;EN1,2:0.0426069009608;FOXM1:0.0234420570787;FOXD3:-0.00671609925218;NHLH1,2:-0.0134840988715;TLX2:-0.0216404255828;PAX2:-0.0318913532253;TAL1_TCF{3,4,12}:-0.0346062527078;POU2F1..3:-0.0357298055589;REST:-0.0463562329259;GTF2I:-0.0556076135793;CUX2:-0.0683662663468;SPI1:-0.0755323729907;HNF4A_NR2F1,2:-0.0804512781511;CEBPA,B_DDIT3:-0.0821461303834;ATF2:-0.0827606369216;ZBTB6:-0.0944149391147;MEF2{A,B,C,D}:-0.0959678332747;STAT1,3:-0.105135194579;MAZ:-0.113574695466;PAX5:-0.121351010728;EGR1..3:-0.122087588446;GLI1..3:-0.128446057796;PAX3,7:-0.142315606395;FOXL1:-0.152564484582;ESRRA:-0.163500613781;SPZ1:-0.163887666148;ELK1,4_GABP{A,B1}:-0.170388870066;HMGA1,2:-0.175168817316;NFIX:-0.177784884164;SMAD1..7,9:-0.182703052227;GATA4:-0.192063550806;HNF1A:-0.195644800714;MED-1{core}:-0.213384257275;PRDM1:-0.21341198437;ATF6:-0.219985783708;LMO2:-0.221171545999;NKX3-2:-0.224299921399;ZIC1..3:-0.238996214748;DMAP1_NCOR{1,2}_SMARC:-0.241718810028;VSX1,2:-0.247213056783;GZF1:-0.258359547631;JUN:-0.271108341177;PATZ1:-0.279163045595;PRRX1,2:-0.302486053653;HLF:-0.305001269017;GCM1,2:-0.319714657799;NFKB1_REL_RELA:-0.329546683001;TFCP2:-0.331550836696;RFX1:-0.333016778021;OCT4_SOX2{dimer}:-0.338198314643;MTF1:-0.338873254168;NANOG{mouse}:-0.343095077419;MYBL2:-0.353356420689;POU5F1:-0.355937804915;EBF1:-0.356586490934;KLF4:-0.370065554078;HSF1,2:-0.390500416769;MZF1:-0.39557420124;RUNX1..3:-0.399166638711;FOXO1,3,4:-0.405811585618;BREu{core}:-0.419789638858;SREBF1,2:-0.434093119118;EP300:-0.465487732753;PPARG:-0.473004896233;FOX{F1,F2,J1}:-0.477875760872;HIF1A:-0.4964497301;UFEwm:-0.507390402123;FOX{D1,D2}:-0.508991352341;MAFB:-0.512873564379;NKX2-3_NKX2-5:-0.516955037296;IRF1,2:-0.517968189909;IRF7:-0.523025956932;EVI1:-0.530912405129;SNAI1..3:-0.535176761859;TBX4,5:-0.58125859178;CREB1:-0.583864625279;FOXP1:-0.596623652321;ZNF384:-0.613212918346;TGIF1:-0.613729188502;RREB1:-0.61470801603;HOX{A6,A7,B6,B7}:-0.616013339456;TEF:-0.62421614943;AHR_ARNT_ARNT2:-0.625137085212;PAX4:-0.647649636176;BPTF:-0.660473247063;DBP:-0.662448786139;HMX1:-0.6948410309;HOXA9_MEIS1:-0.697038405636;NFIL3:-0.706839871844;MYFfamily:-0.712134003179;ATF4:-0.734554210612;ALX4:-0.738633614638;FOXN1:-0.755410846053;FOXQ1:-0.76641933508;ZEB1:-0.779436281274;ATF5_CREB3:-0.785629973878;AIRE:-0.80218532684;XBP1:-0.808125729968;TOPORS:-0.863750653425;POU6F1:-0.883667996602;FOXP3:-0.913138561448;ESR1:-0.927157824706;NR6A1:-0.941763332456;NR1H4:-0.999846967565;RXRA_VDR{dimer}:-1.05918493464;T:-1.07072441464;RFX2..5_RFXANK_RFXAP:-1.11967182918;HOX{A4,D4}:-1.182953808;NKX6-1,2:-1.18958273596;ZBTB16:-1.19352753515;PDX1:-1.23907049562;NKX3-1:-1.24051441062;CDX1,2,4:-1.51890610551;NKX2-1,4:-1.76804491249
|xref=
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11207-116A1;search_select_hide=table117:FF:11207-116A1
}}
}}

Latest revision as of 16:24, 3 June 2020

Name:Endothelial Cells - Aortic, donor0
Species:Human (Homo sapiens)
Library ID:CNhs10837
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueaorta
dev stageNA
sexNA
ageNA
cell typeblood vessel endothelial cell
cell lineNA
companyCell Applications
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberCA304-R10a
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005519
CollapseLibrary accession numbers

Library idMethodExp. accession idRun accession id
CNhs10837 CAGE DRX008216 DRR009088
CollapseAccession ID Hg19

Library idBAMCTSS
CNhs10837 DRZ000513 DRZ001898
CollapseAccession ID Hg38

Library idBAMCTSS
CNhs10837 DRZ011863 DRZ013248
Download raw sequence, BAM & CTSS
CollapseHg19
FastaBAMCTSS
downloaddownloaddonwload
CollapseHg38
BAMCTSS
downloaddonwload
HumanCAGEScan Download raw sequence, BAM & CTSS

Library id3prime-FASTQ5prime-FASTQBAMCTSS
NCig10038downloaddownloaddownloaddownload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005519
CollapseLibrary accession numbers

Library idMethodExp. accession idRun accession id
SRhi10003.TGACCA sRNA-Seq DRX037013 DRR041379
CollapseAccession ID Hg19

Library idBAMCTSS
SRhi10003.TGACCA DRZ007021


Relative expression to median (log10)


Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample


JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10837



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10837



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10837


FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0002139 (endothelial cell of vascular tree)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0000071 (blood vessel endothelial cell)
1000413 (endothelial cell of artery)
0002544 (aortic endothelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000947 (aorta)
0001637 (artery)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0006914 (squamous epithelium)
0004573 (systemic artery)
0000487 (simple squamous epithelium)
0003509 (arterial blood vessel)
0004638 (blood vessel endothelium)
0003915 (endothelial tube)
0004700 (arterial system endothelium)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0002049 (vasculature)
0001986 (endothelium)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0004852 (cardiovascular system endothelium)
0001917 (endothelium of artery)
0004535 (cardiovascular system)
0004571 (systemic arterial system)
0010191 (aortic system)
0004572 (arterial system)
0004537 (blood vasculature)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000046 (human endothelial cell sample)
0000047 (human endothelial cell of the artery sample)
0000048 (human endothelial cell of the aorta sample)
0000001 (sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0002546 (embryonic blood vessel endothelial progenitor cell)
CL:0000222 (mesodermal cell)