FFCP PHASE1:Hg19::chr11:64512273..64512337,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:64512273..64512337,- to FFCP PHASE1:Hg19::chr11:64512273..64512337,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10235 | |EntrezGene=10235 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9879 | |HGNC=9879 | ||
|TSSclassifier=strong | |||
|UniProt=A6NJ28,Q7LDG7,E7EMB4 | |UniProt=A6NJ28,Q7LDG7,E7EMB4 | ||
|association_with_transcript=0bp_to_ENST00000377487,ENST00000377497,ENST00000441258,ENST00000480443,NM_001098670,uc009ypv.2_5end | |||
|cluster_id=chr11:64512273..64512337,- | |||
|coexpression_cluster_id=C272 | |||
|description=CAGE_peak_3_at_RASGRP2_5end | |||
|id=chr11:64512273..64512337,- | |||
|ontology_enrichment_celltype=CL:0000037!5.86e-37!172;CL:0000566!5.86e-37!172;CL:0000988!1.50e-33!182;CL:0002032!2.36e-33!165;CL:0000837!2.36e-33!165;CL:0000738!5.22e-27!140;CL:0002087!3.78e-24!119;CL:0000542!3.90e-20!53;CL:0000051!3.90e-20!53;CL:0002031!1.26e-19!124;CL:0000838!1.44e-19!52;CL:0000763!2.51e-14!112;CL:0000049!2.51e-14!112;CL:0000791!1.41e-12!18;CL:0000789!1.41e-12!18;CL:0002420!1.41e-12!18;CL:0002419!1.41e-12!18;CL:0000790!1.41e-12!18;CL:0000084!8.75e-12!25;CL:0000827!8.75e-12!25;CL:0000236!1.34e-10!14;CL:0002057!2.04e-09!42;CL:0000625!2.10e-08!11;CL:0000766!3.35e-08!76;CL:0000860!8.30e-08!45;CL:0000945!1.24e-07!24;CL:0000826!1.24e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.53e-15;18!CL:0000789;2.53e-15;18!CL:0002419;2.53e-15;18!CL:0000084;1.18e-14;25!CL:0000542;1.71e-14;53!CL:0000236;7.93e-13;13!CL:0000625;4.28e-10;11!CL:0002087;7.31e-09;104!CL:0000988;3.01e-07;177!CL:0000945;3.98e-07;24!CL:0000094;9.60e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.54e-40,168;CL:0000988,2.71e-36,177;CL:0002032,8.94e-36,161;CL:0000837,8.94e-36,161;CL:0000738,1.88e-28,136;CL:0002087,3.66e-27,115;CL:0000542,1.17e-22,53;CL:0000051,1.17e-22,53;CL:0000838,5.78e-22,52;CL:0002031,1.45e-20,120;CL:0000791,2.67e-15,18;CL:0000789,2.67e-15,18;CL:0002420,2.67e-15,18;CL:0002419,2.67e-15,18;CL:0000790,2.67e-15,18;CL:0000084,7.30e-15,25;CL:0000827,7.30e-15,25;CL:0000763,1.38e-14,108;CL:0000049,1.38e-14,108;CL:0000236,7.83e-13,14;CL:0000625,4.26e-10,11;CL:0000860,4.67e-09,42;CL:0002057,4.67e-09,42;CL:0000766,4.76e-08,72;CL:0000945,4.55e-07,24;CL:0000826,4.55e-07,24;CL:0000094,9.01e-07,8;CL:0000473,9.80e-07,48;CL:0000234,9.80e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000790;2.53e-15;18!CL:0000051;1.71e-14;53 | |||
|ontology_enrichment_disease=DOID:1240!1.86e-12!39;DOID:2531!1.30e-10!51;DOID:0060083!1.30e-10!51;DOID:8692!1.80e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.41e-12;31!DOID:1240;5.21e-12;39!DOID:2531;9.74e-09;51!DOID:0060083;9.74e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.21e-15,39;DOID:2531,2.36e-13,51;DOID:0060083,2.36e-13,51;DOID:8692,1.62e-12,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.84e-22!115;UBERON:0002390!1.14e-08!102;UBERON:0003061!1.14e-08!102;UBERON:0002193!5.21e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.60e-08;15!UBERON:0000179;5.60e-08;15!UBERON:0000463;5.60e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.47e-21,114;UBERON:0002390,1.08e-09,98;UBERON:0003061,1.08e-09,98;UBERON:0002193,1.71e-08,108;UBERON:0000178,5.92e-08,15;UBERON:0000179,5.92e-08,15;UBERON:0000463,5.92e-08,15 | |||
|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0.572471974262113,0.136874425072884,0.251085279189606,0.916960868975415,0.164201178899891,0.314843125254717,5.90046415273356,6.52509976765262,10.8371286321253,0,0,0,14.3314321073558,6.25544622944655,12.6248188913984,9.41792194504192,5.61524452916397,13.4546739843828,0,1.6194683300949,0.515151135268373,2.4717700592526,2.64513160582167,2.18325655069035,0.929716147622738,2.46700732813095,1.85823822537062,2.3015391385772,1.7931249457037,1.89185783910868,2.41321976515633,3.87290810150296,0,2.63539275359647,2.45615535052061,1.57306439111559,0.918251677112708,2.56743221660875,0,1.64925650093358,2.39356389145958,3.40979800426155,0.870627715885752,3.40431134814684,1.24564449799115,2.51248665256743,2.60741459210101,0.868755378820466,3.63239701580021,1.47311054395026,0.632924774881769,9.29523259772544,6.59073329891635,7.54771123830153,5.27944566388527,3.60424542819615,3.53596290733576,12.8255734683562,7.9566670879636,7.12390199682072,61.5986855614629,69.3596036302907,75.6082865784022,59.3155009367445,84.4835532645986,74.1430647541283,74.0370257519046,63.9216015538694,73.4284730151188,44.6300263921913,47.4018802875284,6.60856642895129,9.52864557068611,16.8565814256049,24.3920114941153,19.6505381374582,22.4105633909465,17.7217685114119,31.6144598634583,27.9334205383493,29.2240092611867,12.7007920849098,12.668054021418,11.9628303075155,16.519035689666,19.8541545574796,15.7371810547453,20.5547380754595,25.1478516185122,18.5473974870434,33.2161901483015,24.8812970123433,51.2224066644386,17.5629481181228,24.9093320841249,25.084803520232,15.9402405972287,22.6181444170109,22.7879208849746,19.0090408889675,27.856397029388,22.2696703408688,18.7396089828519,22.9673934482696,24.6338399076314,12.7012248231581,11.4999284186908,21.4340117746542,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,1.33037638477538,1.31752178539689,2.22664428346111,0,0,0.324547393654683,0.174129737299267,0.398873881556595,7.3932093534656,4.0039643754609,4.45749001595478,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0.367663080345869,0,0,0,0,0,0,0.183201743930407,17.1314542666882,38.7780264148325,0.436094052142534,0,0,0,0,0.354668382198357,1.12135520028461,0,0.24666754841716,0,0.67355336034844,0.163461903113459,0.756787138224657,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0.427114777637135,0,0,0,0,0,0,0,0,0.184099797284599,1.13152239773168,0,0,0,0,0.272746120590835,0,1.46368447355514,1.45782745153634,0.580969714347592,1.45125477021519,0.252320850875628,2.18986415445498,0,1.92972281457866,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0.982827216677626,0,12.3609667836102,0.122988438543114,0.857839051492628,0,0,0,0.0925884451585296,0,0,0,0,1.87853910777315,0,0,0,0,0,0,0.702012795417713,0.297262324577456,0.93733833986777,0.16798212819886,0,0,0.290633938513962,0,0,0.44024217006613,0.621984346622316,0.144119953416961,0.37872730027914,0,0,0,1.71072446022705,0,0,0,0.336393253036082,1.74384027533312,0.1466765716419,0,7.15312891703765,0,0.797814349754612,1.04007436911366,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,6.164682919644,14.5802762549426,14.2314199407281,18.6097402605635,0.254094624222463,0,0,0.837581326671744,0.637938751653163,9.73709131131337,14.9580729602012,16.5766205374414,0,0,0,1.24782516918484,0,1.26161932027148,0.937131319941706,0,0,2.0694614258501,0,0,0.260650843404249,1.37060810223918,0.686286847621712,15.7143699853394,16.3942792622149,18.0369572687821,0,0,0,0,0.306923946576125,0,0,0,0.321707842287215,2.96836132889982,0,0,0,0,0,0.483437798366489,0.601519410909855,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0.261435451024901,0,0,0.325378394664303,1.33953315142039,0.640986253728404,0.330037999682352,0,0,1.6068392984416,0,0,0,0.275673144969061,0.107420244868274,0,0.255679882248303,0,0.330569830721956,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0.744316738719335,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.9554993798559,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0.35667105148125,0,0,0,0,0.349934720244983,0,1.34060455107157,0,1.12972560932135,0,0,0,0.229723400206959,31.4617517723945,25.9976650428408,36.4574199791464,25.7290317494412,24.2703741120855,33.7206121820213,17.2810059916197,30.1387566991823,0.213648142254946,1.92495971052672,0.490080431962063,15.9790730608118,6.05930694501068,6.47390774470568,6.85532972733936,10.1785479430736,5.1706449935739,3.59845090630601,2.921597462471,4.49275484981534,15.9764275323235,17.2347885350326,5.01268954180134,3.21654377823046,4.33587802779989,10.2917850667434,2.98092366383228,6.87010689511529,5.53033375755224,5.81557880520281,6.34026738505252,10.9417333425143,0,1.2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| 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| ||
|short_description=p3@RASGRP2 | |||
}} | }} |
Latest revision as of 04:12, 19 September 2015
Short description: | p3@RASGRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RASGRP2_5end |
Coexpression cluster: | C272_CD19_CD4_CD8_Whole_Peripheral_lymph_tonsil |
Association with transcript: | 0bp_to_ENST00000377487, ENST00000377497, ENST00000441258, ENST00000480443, NM_001098670, uc009ypv.2_5end |
EntrezGene: | RASGRP2 |
HGNC: | 9879 |
UniProt: | A6NJ28Q7LDG7E7EMB4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.54e-40 | 168 |
hematopoietic cell | 2.71e-36 | 177 |
hematopoietic oligopotent progenitor cell | 8.94e-36 | 161 |
hematopoietic multipotent progenitor cell | 8.94e-36 | 161 |
leukocyte | 1.88e-28 | 136 |
nongranular leukocyte | 3.66e-27 | 115 |
lymphocyte | 1.17e-22 | 53 |
common lymphoid progenitor | 1.17e-22 | 53 |
lymphoid lineage restricted progenitor cell | 5.78e-22 | 52 |
hematopoietic lineage restricted progenitor cell | 1.45e-20 | 120 |
mature alpha-beta T cell | 2.67e-15 | 18 |
alpha-beta T cell | 2.67e-15 | 18 |
immature T cell | 2.67e-15 | 18 |
mature T cell | 2.67e-15 | 18 |
immature alpha-beta T cell | 2.67e-15 | 18 |
T cell | 7.30e-15 | 25 |
pro-T cell | 7.30e-15 | 25 |
myeloid cell | 1.38e-14 | 108 |
common myeloid progenitor | 1.38e-14 | 108 |
B cell | 7.83e-13 | 14 |
CD8-positive, alpha-beta T cell | 4.26e-10 | 11 |
classical monocyte | 4.67e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.67e-09 | 42 |
myeloid leukocyte | 4.76e-08 | 72 |
lymphocyte of B lineage | 4.55e-07 | 24 |
pro-B cell | 4.55e-07 | 24 |
granulocyte | 9.01e-07 | 8 |
defensive cell | 9.80e-07 | 48 |
phagocyte | 9.80e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.47e-21 | 114 |
hematopoietic system | 1.08e-09 | 98 |
blood island | 1.08e-09 | 98 |
hemolymphoid system | 1.71e-08 | 108 |
blood | 5.92e-08 | 15 |
haemolymphatic fluid | 5.92e-08 | 15 |
organism substance | 5.92e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.21e-15 | 39 |
hematologic cancer | 2.36e-13 | 51 |
immune system cancer | 2.36e-13 | 51 |
myeloid leukemia | 1.62e-12 | 31 |