FFCP PHASE1:Hg19::chr11:75283475..75283488,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:75283475..75283488,+ to FFCP PHASE1:Hg19::chr11:75283475..75283488,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:75283475..75283488,+ | |||
|description=CAGE_peak_at_chr11:75283475..75283488,+ | |||
|id=chr11:75283475..75283488,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.55e-27!180;CL:0000057!1.02e-14!75;CL:0000393!1.59e-13!60;CL:0000211!1.59e-13!60;CL:0000183!3.70e-13!59;CL:0000680!3.89e-13!57;CL:0000056!3.89e-13!57;CL:0000355!3.89e-13!57;CL:0000187!5.63e-13!54;CL:0000222!1.90e-11!119;CL:0000192!6.65e-11!42;CL:0000514!6.65e-11!42;CL:0000144!1.59e-09!625;CL:0002321!6.33e-09!248;CL:0000220!8.86e-09!246;CL:0000548!2.91e-08!679;CL:0000004!2.91e-08!679;CL:0000255!2.91e-08!679;CL:0000012!8.21e-08!682;CL:0000359!6.20e-07!32;CL:0000499!6.63e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.05e-10;12!CL:0000192;3.05e-07;43!CL:0000187;8.06e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.21e-15,76;CL:0000393,1.97e-11,61;CL:0000211,1.97e-11,61;CL:0000048,2.24e-11,427;CL:0000680,4.16e-11,58;CL:0000056,4.16e-11,58;CL:0000355,4.16e-11,58;CL:0000187,6.31e-11,55;CL:0000723,6.85e-11,433;CL:0000034,1.01e-10,441;CL:0000192,1.17e-10,43;CL:0000514,1.17e-10,43;CL:0002334,7.85e-10,12;CL:0002594,9.01e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;3.05e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.68e-13!83;UBERON:0002329!4.68e-13!83;UBERON:0003077!4.68e-13!83;UBERON:0003059!4.68e-13!83;UBERON:0007282!4.68e-13!83;UBERON:0009618!4.68e-13!83;UBERON:0007285!4.68e-13!83;UBERON:0001134!4.55e-12!61;UBERON:0002036!4.55e-12!61;UBERON:0003082!4.55e-12!61;UBERON:0004290!1.02e-11!70;UBERON:0002385!4.50e-11!63;UBERON:0001015!4.50e-11!63;UBERON:0000383!4.50e-11!63;UBERON:0000486!2.01e-10!82;UBERON:0005256!2.68e-09!143;UBERON:0002100!3.08e-08!216;UBERON:0004872!1.76e-07!84;UBERON:0000490!1.83e-07!138;UBERON:0001637!4.66e-07!42;UBERON:0003509!4.66e-07!42;UBERON:0004572!4.66e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.72e-07;6!UBERON:0002358;4.72e-07;6!UBERON:0003684;4.72e-07;6!UBERON:0001178;4.72e-07;6!UBERON:0001135;5.22e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.38e-11,73;UBERON:0001134,4.25e-11,62;UBERON:0002036,4.25e-11,62;UBERON:0003082,4.25e-11,62;UBERON:0002329,1.38e-10,71;UBERON:0003059,1.38e-10,71;UBERON:0007282,1.38e-10,71;UBERON:0004290,1.38e-10,71;UBERON:0009618,1.38e-10,71;UBERON:0002385,1.58e-10,64;UBERON:0001015,1.58e-10,64;UBERON:0000383,1.58e-10,64;UBERON:0003077,2.46e-10,72;UBERON:0007285,2.46e-10,72;UBERON:0007503,8.01e-10,78;UBERON:0000486,1.08e-08,83;UBERON:0001637,1.69e-08,42;UBERON:0003509,1.69e-08,42;UBERON:0004572,1.69e-08,42;UBERON:0004872,1.85e-07,83;UBERON:0005256,4.75e-07,122;UBERON:0001135,5.72e-07,15;UBERON:0003688,7.54e-07,6;UBERON:0002358,7.54e-07,6;UBERON:0003684,7.54e-07,6;UBERON:0001178,7.54e-07,6;UBERON:0001310,9.01e-07,4 | |||
|phase1_expression=2.72517568905835,2.5692062866918,1.26858963686374,1.0007329835313,3.5756887554183,0.872338524100369,0,0.631719873426831,0,0,0,0.218441372130172,0.263766978228454,0.990130823680373,0.331397375727916,2.01697543935533,1.20538905604795,0,1.46379839637152,0,0,0.313454721478088,0.286235987131057,0,0.376627918784408,0.152826811495903,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.02290049474824,0.361439152384566,1.50401373190767,1.30361867064741,0,1.94653948121054,0.189069634328136,1.55210578223795,0.614843499851882,0.130979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0.419499436209906,1.10047216776027,0,0.516833518338658,0.35576626268671,0,0,0,0.732186172644509,0,0.81014194788176,0.357198913136319,0,0,1.53316637465883,0,0.549605231791222,0,0,0,1.49091585508596,2.15271869829786,0.926864265692532,3.44203944898576,1.06400514659507,2.24271040056923,4.2699598291882,4.44001587150888,0,0.67355336034844,0.326923806226917,0,0,0.468642863667593,0.312160076830321,1.1409436430889,0.597794722207204,0.117434498643765,0,0.140450806702248,0,0.61417158655884,0.206651562351531,0,2.96720315134268,0,0.718618141816238,0.673344455816265,0.125118519871964,0.277064115484183,0.438977620880838,2.75839016219118,0.600952235626387,1.70148274740032,0.89694817844431,1.06778694409284,1.48352330811693,1.20036438433761,0.206105058476878,1.8034837803194,1.30281799432113,1.85653965465393,1.16924406193438,1.26216887122057,1.47279837827679,0.80823028409406,1.42003837006646,0.10075209822764,1.3564847384839,0,0,0,0.365921118388786,0.132529768321485,0.580969714347592,0.621966330092223,1.00928340350251,1.09493207722749,0,1.92972281457866,0,0.928735856063958,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0.474541238222193,0.134831308160164,0.196221465125346,0.769494313892781,0,0,0.8231480226628,4.41026134156626,0,0,0.590789906681404,0.441463099414651,0.368965315629341,0.514703430895577,0.439001141634502,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0.288732895522148,1.38895653772983,0.380508304469197,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0.300343057843917,0.571652865261156,0,0.43596006883328,0.36669142910475,0.129271715757778,7.15312891703765,5.071816515336,0.797814349754612,0,0.514414748524284,2.83698264046557,0,0.57191197463259,2.17048642156577,0,0.65147236858747,0,3.16780749173372,0.904318131178758,0.871533458600294,0.599837947092342,0,0,0,0.958499421966331,1.14861935834114,0,0.579125226670317,1.84928690295345,0,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0.49076596687656,2.50085260529839,0.542530047399471,2.28767947683888,12.6684582045985,2.20783381047509,0.585707074963566,0.601892199455438,2.27407504055985,2.0694614258501,0.664225598535437,1.65932251687533,0.955719759148911,0.195801157462741,0.686286847621712,0,0,0,0.606255142892519,3.32870879020994,0.30239029332968,2.23297027036899,1.07423381301644,1.12264037773229,2.43464383585832,0,2.41280881715411,1.48418066444991,2.31314540703983,2.30830242907065,0.739144404124282,2.59627214591811,0.464841513839837,0.846016147141356,0.601519410909855,0.0920809889358963,1.95184561879831,2.36718518408732,1.04899531967539,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0.431831832204279,0,0,1.50506932156456,0,0,0.447749509444357,0,0,0,0,0.325378394664303,0.9273691048295,0,0,0,0,4.82051789532479,0.676695028044854,1.07834031980251,0.614014698904518,0.137836572484531,0.966782203814463,2.32026710262766,0.596586391912706,0.890320356467374,0.495854746082934,0.192190067365106,0.127612712494584,0.10115778085555,0.929691098594572,2.83331112147576,1.3940745403212,0,1.06461206063404,0,0.55597265731176,0.715624433709956,0.372158369359667,0.316379424718726,0.762520775695299,0.511795582622668,0.42793898803392,0.636406495851874,2.35484592059769,1.2591072030832,2.74537029736055,1.53156123049392,0.404364963146632,0,0.421258456238981,2.92580243453754,0.243713489631284,0,0.545999645631943,2.12108147930569,1.13008116620243,1.10273068709225,1.32687795048244,0.438450885253763,1.73632660280006,1.31178950409327,1.01455188481352,2.478587984798,1.97186921772569,0,0.687743287091848,1.78335525740625,0.354761064070598,1.05553817648832,0.987884678879706,0.75894634753143,0,0.48111056362756,0.670302275535787,0,0.564862804660675,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0.568272293612826,0.23874448473769,0,0.614321404198464,0,0,0.445234820091624,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0.173624994933292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| ||
|short_description=p@chr11:75283475..75283488,+ | |||
}} | }} |
Latest revision as of 02:35, 24 July 2015
Short description: | p@chr11:75283475..75283488, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:75283475..75283488, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.21e-15 | 76 |
electrically responsive cell | 1.97e-11 | 61 |
electrically active cell | 1.97e-11 | 61 |
multi fate stem cell | 2.24e-11 | 427 |
muscle precursor cell | 4.16e-11 | 58 |
myoblast | 4.16e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.16e-11 | 58 |
muscle cell | 6.31e-11 | 55 |
somatic stem cell | 6.85e-11 | 433 |
stem cell | 1.01e-10 | 441 |
smooth muscle cell | 1.17e-10 | 43 |
smooth muscle myoblast | 1.17e-10 | 43 |
preadipocyte | 7.85e-10 | 12 |
smooth muscle cell of the umbilical artery | 9.01e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 3.38e-11 | 73 |
skeletal muscle tissue | 4.25e-11 | 62 |
striated muscle tissue | 4.25e-11 | 62 |
myotome | 4.25e-11 | 62 |
somite | 1.38e-10 | 71 |
presomitic mesoderm | 1.38e-10 | 71 |
presumptive segmental plate | 1.38e-10 | 71 |
dermomyotome | 1.38e-10 | 71 |
trunk paraxial mesoderm | 1.38e-10 | 71 |
muscle tissue | 1.58e-10 | 64 |
musculature | 1.58e-10 | 64 |
musculature of body | 1.58e-10 | 64 |
paraxial mesoderm | 2.46e-10 | 72 |
presumptive paraxial mesoderm | 2.46e-10 | 72 |
epithelial vesicle | 8.01e-10 | 78 |
multilaminar epithelium | 1.08e-08 | 83 |
artery | 1.69e-08 | 42 |
arterial blood vessel | 1.69e-08 | 42 |
arterial system | 1.69e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 1.85e-07 | 83 |
trunk mesenchyme | 4.75e-07 | 122 |
smooth muscle tissue | 5.72e-07 | 15 |
omentum | 7.54e-07 | 6 |
peritoneum | 7.54e-07 | 6 |
abdominal cavity | 7.54e-07 | 6 |
visceral peritoneum | 7.54e-07 | 6 |
umbilical artery | 9.01e-07 | 4 |