FFCP PHASE1:Hg19::chr12:107474519..107474540,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:107474519..107474540,- to FFCP PHASE1:Hg19::chr12:107474519..107474540,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:107474519..107474540,- | |||
|coexpression_cluster_id=C119 | |||
|description=CAGE_peak_at_chr12:107474519..107474540,- | |||
|id=chr12:107474519..107474540,- | |||
|ontology_enrichment_celltype=CL:0000738!7.41e-12!140;CL:0002057!4.00e-11!42;CL:0000860!9.35e-10!45;CL:0000037!9.29e-09!172;CL:0000566!9.29e-09!172;CL:0002087!2.13e-08!119;CL:0002031!3.04e-08!124;CL:0000988!1.10e-07!182;CL:0002032!3.21e-07!165;CL:0000837!3.21e-07!165;CL:0000624!5.71e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000623;8.81e-22;3!CL:0002393;7.27e-11;6!CL:0002397;7.27e-11;6!CL:0000791;7.53e-10;18!CL:0000789;7.53e-10;18!CL:0002419;7.53e-10;18!CL:0000084;5.08e-07;25!CL:0000542;7.97e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,5.39e-22,3;CL:0000825,5.39e-22,3;CL:0000738,2.16e-18,136;CL:0000037,3.83e-14,168;CL:0002087,5.89e-14,115;CL:0002031,2.76e-13,120;CL:0000988,3.19e-13,177;CL:0000838,5.95e-12,52;CL:0002032,7.41e-12,161;CL:0000837,7.41e-12,161;CL:0000542,1.08e-11,53;CL:0000051,1.08e-11,53;CL:0000791,7.33e-10,18;CL:0000789,7.33e-10,18;CL:0002420,7.33e-10,18;CL:0002419,7.33e-10,18;CL:0000790,7.33e-10,18;CL:0002393,1.87e-07,9;CL:0002397,1.87e-07,9;CL:0000084,4.99e-07,25;CL:0000827,4.99e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;7.53e-10;18!UBERON:0005425;4.40e-08;1!CL:0000051;7.97e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;4.40e-08;1!UBERON:0001785;4.40e-08;1!UBERON:0002464;4.40e-08;1!UBERON:0004904;4.40e-08;1!UBERON:0001021;4.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.57e-08,1;UBERON:0001785,3.57e-08,1;UBERON:0002464,3.57e-08,1;UBERON:0004904,3.57e-08,1;UBERON:0001021,3.57e-08,1;UBERON:0003902,3.57e-08,1;UBERON:0005425,3.57e-08,1 | |||
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| ||
|short_description=p@chr12:107474519..107474540,- | |||
}} | }} |
Latest revision as of 04:31, 24 July 2015
Short description: | p@chr12:107474519..107474540, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:107474519..107474540, - |
Coexpression cluster: | C119_CD4_CD8_Natural_Neutrophils_CD14_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 5.39e-22 | 3 |
pro-NK cell | 5.39e-22 | 3 |
leukocyte | 2.16e-18 | 136 |
hematopoietic stem cell | 3.83e-14 | 168 |
nongranular leukocyte | 5.89e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 2.76e-13 | 120 |
hematopoietic cell | 3.19e-13 | 177 |
lymphoid lineage restricted progenitor cell | 5.95e-12 | 52 |
hematopoietic oligopotent progenitor cell | 7.41e-12 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-12 | 161 |
lymphocyte | 1.08e-11 | 53 |
common lymphoid progenitor | 1.08e-11 | 53 |
mature alpha-beta T cell | 7.33e-10 | 18 |
alpha-beta T cell | 7.33e-10 | 18 |
immature T cell | 7.33e-10 | 18 |
mature T cell | 7.33e-10 | 18 |
immature alpha-beta T cell | 7.33e-10 | 18 |
intermediate monocyte | 1.87e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.87e-07 | 9 |
T cell | 4.99e-07 | 25 |
pro-T cell | 4.99e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.57e-08 | 1 |
cranial nerve | 3.57e-08 | 1 |
nerve trunk | 3.57e-08 | 1 |
nerve connecting eye with brain | 3.57e-08 | 1 |
nerve | 3.57e-08 | 1 |
retinal neural layer | 3.57e-08 | 1 |
presumptive neural retina | 3.57e-08 | 1 |