FFCP PHASE1:Hg19::chr14:103602520..103602537,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:103602520..103602537,+ to FFCP PHASE1:Hg19::chr14:103602520..103602537,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7127 | |EntrezGene=7127 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11895 | |HGNC=11895 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-202bp_to_ENST00000561217_5end | |||
|cluster_id=chr14:103602520..103602537,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_TNFAIP2_5end | |||
|id=chr14:103602520..103602537,+ | |||
|ontology_enrichment_celltype=CL:0002194!8.46e-37!63;CL:0000576!8.46e-37!63;CL:0000040!8.46e-37!63;CL:0000559!8.46e-37!63;CL:0000766!1.33e-36!76;CL:0002009!2.49e-36!65;CL:0002057!2.66e-35!42;CL:0000860!4.23e-33!45;CL:0000557!2.90e-31!71;CL:0000839!8.65e-31!70;CL:0000763!3.57e-23!112;CL:0000049!3.57e-23!112;CL:0000738!4.34e-18!140;CL:0002087!5.49e-16!119;CL:0002031!6.47e-13!124;CL:0000037!7.50e-12!172;CL:0000566!7.50e-12!172;CL:0002032!1.52e-11!165;CL:0000837!1.52e-11!165;CL:0000988!8.41e-11!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.11e-78;33!CL:0002057;1.11e-78;33!CL:0000473;3.19e-65;39!CL:0000234;3.19e-65;39!CL:0000576;3.51e-48;48!CL:0000766;1.81e-34;69!CL:0000763;7.05e-19;100!CL:0002087;1.28e-13;104!CL:0000738;6.35e-10;136!CL:0000771;1.04e-09;2!CL:0000988;1.18e-07;177!CL:0000235;7.76e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.33e-82,48;CL:0000234,2.33e-82,48;CL:0000860,2.45e-77,42;CL:0002057,2.45e-77,42;CL:0002194,3.45e-73,59;CL:0000576,3.45e-73,59;CL:0000040,3.45e-73,59;CL:0000559,3.45e-73,59;CL:0002009,1.42e-70,61;CL:0000766,1.07e-66,72;CL:0000839,1.03e-64,66;CL:0000557,1.20e-63,67;CL:0000763,1.58e-44,108;CL:0000049,1.58e-44,108;CL:0002087,2.73e-36,115;CL:0000738,1.01e-33,136;CL:0002031,2.73e-32,120;CL:0000037,2.03e-27,168;CL:0002032,3.25e-27,161;CL:0000837,3.25e-27,161;CL:0000988,1.34e-25,177;CL:0000134,5.83e-11,354;CL:0002320,1.41e-10,361;CL:0000771,9.96e-10,2;CL:0000219,3.18e-09,386;CL:0000048,1.42e-07,427;CL:0000723,2.39e-07,433;CL:0000034,4.70e-07,441;CL:0000235,7.02e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-56;42!CL:0000049;8.40e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.85e-30!102;UBERON:0003061!6.85e-30!102;UBERON:0002193!6.20e-29!112;UBERON:0002371!1.85e-26!80;UBERON:0001474!1.34e-24!86;UBERON:0004765!3.32e-21!101;UBERON:0001434!3.32e-21!101;UBERON:0002405!5.52e-18!115;UBERON:0002204!1.68e-12!167;UBERON:0003081!2.69e-09!216;UBERON:0000926!7.22e-09!448;UBERON:0004120!7.22e-09!448;UBERON:0006603!7.22e-09!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.03e-56,98;UBERON:0003061,9.03e-56,98;UBERON:0002371,2.79e-55,76;UBERON:0001474,1.04e-50,82;UBERON:0002193,7.26e-50,108;UBERON:0004765,1.49e-45,90;UBERON:0002405,7.59e-44,93;UBERON:0001434,7.28e-43,100;UBERON:0002204,3.66e-24,167;UBERON:0003081,3.80e-24,203;UBERON:0000926,2.29e-14,315;UBERON:0004120,2.29e-14,315;UBERON:0006603,2.29e-14,315;UBERON:0002384,4.72e-10,371 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0.786728553697808,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.60435557976113,3.25516306073778,2.01523926815932,0.971680998056939,1.54545340580512,1.16318591023652,2.26725566213286,0.970336244751265,1.16214518452842,1.23350366406548,2.16794459626573,8.34307937734236,3.84241059793651,4.96612682766029,1.03423704220986,0.645484683583826,4.06279459783025,1.88242339542605,0.818718450173537,2.02251136000576,5.81559395504715,1.60464513538047,5.75403413219137,1.64925650093358,1.39624560335142,1.27867425159808,7.83564944297177,5.6738522469114,5.60540024096017,1.25624332628372,0.521482918420201,2.38907729175628,7.26479403160043,6.99727508376373,8.86094684834476,0.633765858935825,0.850417199860174,0.419317291016752,0.44931452458598,1.65194582125657,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0.577465791044295,0.462985512576611,0.761016608938393,0,0,0.984868024349589,0.702012795417713,0.891786973732369,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,2.43247561282381,1.50677127429638,4.21667878966063,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0.500170521059677,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0.320182673410333,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0.393373244878272,0,0.308061348417659,0.784349769176855,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.386682873168488,0,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0,0,0,0,0.731140468893853,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26664581178598,0.329294892959902,0,0,0,0,0,0,0.43050537267123,1.68471475667626,0,0,0.507447609232169,0.764637207142375,0,1.42939065274673,1.23408681925858,0,1.62009431171434,3.96562588147135,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0,1.2700414963433,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0.102268682502155,0,0,0.0898683511473268,0.716084698702437,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0.227884111694002,0,0.269272933229316,0,0.957003479195758,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0.632994193584081,0.326465616318295,0,0,0,0.0884575645033392,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0,0,0,0,0.313932918407225,0,0.853828638089378,0,0.173559738335131,0.0979923974143777,0.174118413160805,0.17472666824203,0,0,0.146178634172371,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0,0.124252535565433,1.41416420770077,0.407712618220842,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,0.717873024576814,0,0.429226048136571,0,0.0671834724867263,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0,0.2249738915515,0,0.0607495566580247,0,0.157611414598396,0.157363764404994,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0.327872630709804,0.314108192500469,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0.521745061811734,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0.336749488765919,0,0.770479321629213,0.214441591374926,0,0.226705925512272,0.463044948647668,0.734210113519403,0.179088841081487,0.617602894321944,0,0,0,0,0.256241518587947,0,0.303859956177382,0,0.389720617678777,0.664324201566815,0.327130788511688,0,0.49154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| 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| ||
|short_description=p6@TNFAIP2 | |||
}} | }} |
Latest revision as of 14:55, 18 September 2015
Short description: | p6@TNFAIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TNFAIP2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -202bp_to_ENST00000561217_5end |
EntrezGene: | TNFAIP2 |
HGNC: | 11895 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.33e-82 | 48 |
phagocyte | 2.33e-82 | 48 |
classical monocyte | 2.45e-77 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.45e-77 | 42 |
monopoietic cell | 3.45e-73 | 59 |
monocyte | 3.45e-73 | 59 |
monoblast | 3.45e-73 | 59 |
promonocyte | 3.45e-73 | 59 |
macrophage dendritic cell progenitor | 1.42e-70 | 61 |
myeloid leukocyte | 1.07e-66 | 72 |
myeloid lineage restricted progenitor cell | 1.03e-64 | 66 |
granulocyte monocyte progenitor cell | 1.20e-63 | 67 |
myeloid cell | 1.58e-44 | 108 |
common myeloid progenitor | 1.58e-44 | 108 |
nongranular leukocyte | 2.73e-36 | 115 |
leukocyte | 1.01e-33 | 136 |
hematopoietic lineage restricted progenitor cell | 2.73e-32 | 120 |
hematopoietic stem cell | 2.03e-27 | 168 |
hematopoietic oligopotent progenitor cell | 3.25e-27 | 161 |
hematopoietic multipotent progenitor cell | 3.25e-27 | 161 |
hematopoietic cell | 1.34e-25 | 177 |
mesenchymal cell | 5.83e-11 | 354 |
connective tissue cell | 1.41e-10 | 361 |
eosinophil | 9.96e-10 | 2 |
motile cell | 3.18e-09 | 386 |
multi fate stem cell | 1.42e-07 | 427 |
somatic stem cell | 2.39e-07 | 433 |
stem cell | 4.70e-07 | 441 |
macrophage | 7.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.03e-56 | 98 |
blood island | 9.03e-56 | 98 |
bone marrow | 2.79e-55 | 76 |
bone element | 1.04e-50 | 82 |
hemolymphoid system | 7.26e-50 | 108 |
skeletal element | 1.49e-45 | 90 |
immune system | 7.59e-44 | 93 |
skeletal system | 7.28e-43 | 100 |
musculoskeletal system | 3.66e-24 | 167 |
lateral plate mesoderm | 3.80e-24 | 203 |
mesoderm | 2.29e-14 | 315 |
mesoderm-derived structure | 2.29e-14 | 315 |
presumptive mesoderm | 2.29e-14 | 315 |
connective tissue | 4.72e-10 | 371 |