FFCP PHASE1:Hg19::chr14:61748076..61748115,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:61748076..61748115,- to FFCP PHASE1:Hg19::chr14:61748076..61748115,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=161291 | |EntrezGene=161291 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27254 | |HGNC=27254 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=78bp_to_ENST00000557163,uc010apr.1_5end | |||
|cluster_id=chr14:61748076..61748115,- | |||
|coexpression_cluster_id=C2305 | |||
|description=CAGE_peak_3_at_TMEM30B_5end | |||
|id=chr14:61748076..61748115,- | |||
|ontology_enrichment_celltype=CL:0000066!1.71e-16!254;CL:0002076!4.82e-16!43;CL:0000223!9.47e-12!59;CL:0002368!3.21e-09!13;CL:0002251!6.35e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.81e-18;42!CL:0002368;6.22e-12;13!CL:0002251;2.20e-10;20!CL:0002202;7.53e-08;9!CL:0002632;7.53e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.75e-23,42;CL:0000066,3.95e-21,253;CL:0000223,3.37e-16,58;CL:0002368,5.99e-12,13;CL:0002251,2.61e-10,20;CL:0002202,7.29e-08,9;CL:0002632,7.29e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000223;4.40e-09;58!UBERON:0006595;3.34e-08;86 | |||
|ontology_enrichment_disease=DOID:305!1.05e-11!106;DOID:1749!3.15e-10!14;DOID:299!1.74e-07!25;DOID:0050687!7.08e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;8.25e-12;14!DOID:299;1.52e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.26e-15,106;DOID:1749,8.83e-12,14;DOID:299,1.35e-10,25;DOID:0050687,2.77e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.70e-23!169;UBERON:0000925!9.70e-23!169;UBERON:0006595!9.70e-23!169;UBERON:0001007!6.94e-18!155;UBERON:0001555!6.94e-18!155;UBERON:0007026!6.94e-18!155;UBERON:0004921!4.50e-15!129;UBERON:0004185!4.50e-15!129;UBERON:0005911!1.21e-13!82;UBERON:0000077!7.31e-13!130;UBERON:0001004!2.05e-12!72;UBERON:0005153!5.92e-11!37;UBERON:0000464!6.20e-11!104;UBERON:0000466!1.16e-10!126;UBERON:0000065!1.35e-09!53;UBERON:0000161!8.03e-09!35;UBERON:0005178!1.36e-08!34;UBERON:0002224!1.36e-08!34;UBERON:0000915!2.68e-08!52;UBERON:0001041!3.00e-08!98;UBERON:0005181!3.81e-08!35;UBERON:0000974!7.23e-08!10;UBERON:0005157!8.42e-08!51;UBERON:0005156!1.41e-07!59;UBERON:0000990!1.41e-07!59;UBERON:0004807!1.98e-07!28;UBERON:0002048!3.04e-07!22;UBERON:0000117!3.04e-07!22;UBERON:0000171!3.04e-07!22;UBERON:0000170!3.04e-07!22;UBERON:0005597!3.04e-07!22;UBERON:0000118!3.04e-07!22;UBERON:0000344!3.29e-07!12;UBERON:0009569!3.47e-07!113;UBERON:0001008!3.73e-07!45;UBERON:0005177!7.06e-07!107;UBERON:0006554!7.73e-07!44;UBERON:0005631!8.62e-07!14;UBERON:0000158!8.62e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.09e-10;33!UBERON:0005178;4.99e-10;34!UBERON:0002224;4.99e-10;34!UBERON:0005911;3.45e-09;36!UBERON:0005181;4.91e-09;35!UBERON:0002048;6.31e-09;22!UBERON:0000117;6.31e-09;22!UBERON:0000171;6.31e-09;22!UBERON:0000170;6.31e-09;22!UBERON:0004807;1.25e-08;22!UBERON:0005409;1.26e-08;22!UBERON:0000974;2.41e-08;6!UBERON:0001555;3.33e-08;54!UBERON:0000344;3.50e-08;20!UBERON:0005631;7.55e-08;10!UBERON:0000158;7.55e-08;10!UBERON:0000160;7.11e-07;17!UBERON:0002294;9.01e-07;7!UBERON:0001173;9.01e-07;7!UBERON:0000065;9.20e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.45e-27,160;UBERON:0000925,5.45e-27,160;UBERON:0006595,5.45e-27,160;UBERON:0001007,1.78e-21,145;UBERON:0001555,1.78e-21,145;UBERON:0007026,1.78e-21,145;UBERON:0004921,1.16e-17,118;UBERON:0005911,1.16e-14,82;UBERON:0001004,3.35e-14,74;UBERON:0005153,1.56e-11,37;UBERON:0005178,2.55e-11,34;UBERON:0002224,2.55e-11,34;UBERON:0005181,8.07e-11,35;UBERON:0000065,8.82e-11,54;UBERON:0001041,2.40e-10,87;UBERON:0005157,1.07e-09,47;UBERON:0000915,1.15e-09,52;UBERON:0002048,6.26e-09,22;UBERON:0000117,6.26e-09,22;UBERON:0000171,6.26e-09,22;UBERON:0000170,6.26e-09,22;UBERON:0005597,6.26e-09,22;UBERON:0000118,6.26e-09,22;UBERON:0005177,6.85e-09,101;UBERON:0000161,1.12e-08,36;UBERON:0000344,4.07e-08,20;UBERON:0005631,1.01e-07,14;UBERON:0000158,1.01e-07,14;UBERON:0009569,1.02e-07,112;UBERON:0006554,1.09e-07,47;UBERON:0008947,1.54e-07,38;UBERON:0003258,1.54e-07,38;UBERON:0001008,2.10e-07,48;UBERON:0005156,2.91e-07,59;UBERON:0000990,2.91e-07,59;UBERON:0005409,3.38e-07,25;UBERON:0000166,6.46e-07,22;UBERON:0000160,6.73e-07,17;UBERON:0004807,6.97e-07,28;UBERON:0004175,9.20e-07,25 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,3.68600904752263,10.4670175195864,4.58726881473362,5.01157258634062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,2.75826367343678,4.51808878167375,4.43704812200145,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.786839080455332,1.17903228824749,0.411202997999018,0,0.977766799900771,0.473447805734733,0,0,0,0,0.541607727530031,0,0,0,0,0.579606171470105,1.4828656316206,1.07016331235885,0,0.113309342697566,0.383220493601921,1.03088233644789,0.506039384039006,1.27426165729639,0,0,0.150575119077773,0.127986611154418,0,0,0.821127996921047,0.201606743224732,0.267440195783507,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,2.22664428346111,4.73583874780305,6.67411997011973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,4.79703457356788,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44499962275583,2.45471508531751,4.87567812161307,1.21973706129595,0.927708378250397,1.2781333715647,1.0366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,7.2563178740437,0,2.85350742062426,2.24803506515239,5.62962245505133,4.44424536760942,0,0,0,0,0,0,0,0,7.90204397959275,4.29243081047436,0,0,0,0.93733833986777,2.68771405118175,2.69372684760534,3.67189943081678,0.871901815541886,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.224170287987055,0,0.646882724578552,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.07857100409308,0.426910231213777,1.81876542867756,0,0.604780586659361,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,3.02148623979056,4.41114234667227,7.27439812593581,0,0,0.131124414959424,0.451199612907412,1.5403067420883,0,2.92278449306521,0.527758144464379,0,0,0,1.54227252690289,0,0,3.05851527654046,9.14183609821597,0.223874754722178,0,0,0,0,0,3.81251743096572,0,0,1.14853107599234,3.90036147621913,0,0,0,0,0,0,0,0,0,2.97512847649761,10.3782636377157,3.1903178123646,11.1273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,3.36777394539292,5.3624182042863,3.26672954583968,3.10674542563371,7.31859133541091,1.68471475667626,8.86860307073351,6.20253180558791,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0,0,3.43056302373444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.42132431836989,0.146508179271894,0,0,0,10.027268358983,5.3453642549875,8.90766036087773,0,0,0,0,0.422250816255987,0.597743964753209,1.38141957765574,12.0927718970052,0,0,0.311039587661807,7.72867819867011,16.1119057208048,0,1.1837208676432,0,0,0,0.0927680981618513,0,4.94812746061943,12.5942399994522,1.44999915086959,9.33106275941097,11.4414142631745,8.74634422541365,0,0,0,0,0,0,0,0,0,0,5.29810228258692,1.76985594558733,0,4.15015027898508,0,14.3414530937051,10.5270382711533,3.11431817566332,5.33034776018635,0,0,0,0,0,0,0,0,0,9.95720129770801,4.09923907158428,0,4.97630965539252,6.98814759576379,7.94339188413713,0,0,0,0,0,0,0,5.47860933009851,0,7.10251925128903,3.62972148145992,0,0.126373159256976,0,0,0,0,0,0,1.42304773014896,0,4.85967267338367,5.87954384486266,4.61413794876134,6.29016005671309,0.51595809741485,0,0,0,2.23074737923365,0,0.677942222341597,0,0,0,6.2576442475137,2.40476460754601,4.26905989478705,0,12.6799567095613,0,0,0,0,7.54220910773745,0,0,0,0,0,0,0,0,0,0,0,0,11.3817030284425,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.964518890790115,1.51293380256957,0.83088067605837,0,0,0,3.35434687599266,3.78267395036151,2.98991152369489,0,0,4.2221343410278,0,0,0,0,0,0,0,0,0,0,1.02586563574658,1.32506888912221,0,0,0,12.6866704017001,6.40724475406168,2.98688179689365,10.3559763836799,0,0,0,3.19170628885091,0,0,0,0,4.08340650250609,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87510918106234,0,0,0,0,0,6.15469833965556,7.46492712039567,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0,0,0,0,0,0,6.18330626556461,7.3141228475599,7.15371534234548,9.58863029047807,0,0,0,0.601682626794058,0,10.9411961572633,0,0,7.39280431085226,0.0675375846183947,0,0,0,0,8.77212426971492,0,0,10.6042814940864,0,0,9.71144966778611,9.7894742281058,4.96733272910777,0,0,0,0,0.236387681767936,7.45250392676863,4.39561319962878,0,6.44625975621715,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,11.6161386881475,0,0,6.35080575286394,8.7060610046739,0,0,7.82988022584546,7.45941775475847,6.82740379900709,0,0.102662806856247,0,1.45713297917742,10.995154782719,0.198950775161368,0,2.2589216407792,0,16.4549499487674,12.1163428229473,5.02686989159102,3.76253837089218,0.4902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| ||
|short_description=p3@TMEM30B | |||
}} | }} |
Latest revision as of 21:30, 24 September 2015
Short description: | p3@TMEM30B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM30B_5end |
Coexpression cluster: | C2305_thyroid_pituitary_small_parotid_choriocarcinoma_salivary_bile |
Association with transcript: | 78bp_to_ENST00000557163, uc010apr.1_5end |
EntrezGene: | TMEM30B |
HGNC: | 27254 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.75e-23 | 42 |
epithelial cell | 3.95e-21 | 253 |
endodermal cell | 3.37e-16 | 58 |
respiratory epithelial cell | 5.99e-12 | 13 |
epithelial cell of alimentary canal | 2.61e-10 | 20 |
epithelial cell of tracheobronchial tree | 7.29e-08 | 9 |
epithelial cell of lower respiratory tract | 7.29e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.26e-15 | 106 |
squamous cell carcinoma | 8.83e-12 | 14 |
adenocarcinoma | 1.35e-10 | 25 |
cell type cancer | 2.77e-09 | 143 |