FFCP PHASE1:Hg19::chr15:35043922..35043932,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:35043922..35043932,- to FFCP PHASE1:Hg19::chr15:35043922..35043932,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:35043922..35043932,- | |||
|coexpression_cluster_id=C1736 | |||
|description=CAGE_peak_at_chr15:35043922..35043932,- | |||
|id=chr15:35043922..35043932,- | |||
|ontology_enrichment_celltype=CL:0000242!5.40e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.90e-12;2!CL:0000242;2.90e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.90e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0003056;8.31e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!9.24e-33!86;UBERON:0001017!4.32e-32!82;UBERON:0000073!3.21e-31!94;UBERON:0001016!3.21e-31!94;UBERON:0003075!1.28e-30!86;UBERON:0007284!1.28e-30!86;UBERON:0001049!1.16e-29!57;UBERON:0005068!1.16e-29!57;UBERON:0006241!1.16e-29!57;UBERON:0007135!1.16e-29!57;UBERON:0002346!5.87e-29!90;UBERON:0002780!9.93e-26!41;UBERON:0001890!9.93e-26!41;UBERON:0006240!9.93e-26!41;UBERON:0003080!4.99e-25!42;UBERON:0000955!2.24e-23!69;UBERON:0006238!2.24e-23!69;UBERON:0002616!2.98e-23!59;UBERON:0003056!1.09e-22!61;UBERON:0004121!4.46e-21!169;UBERON:0000924!2.09e-20!173;UBERON:0006601!2.09e-20!173;UBERON:0001869!1.60e-19!32;UBERON:0001893!3.18e-18!34;UBERON:0001871!6.57e-17!7;UBERON:0001950!2.08e-16!20;UBERON:0002791!3.10e-16!33;UBERON:0002020!1.09e-15!34;UBERON:0003528!1.09e-15!34;UBERON:0002619!8.20e-15!22;UBERON:0007023!8.38e-15!115;UBERON:0000033!1.11e-14!123;UBERON:0000153!1.00e-13!129;UBERON:0007811!1.00e-13!129;UBERON:0000956!7.03e-13!25;UBERON:0000203!7.03e-13!25;UBERON:0002771!6.70e-12!3;UBERON:0003296!4.13e-10!4;UBERON:0010133!4.13e-10!4;UBERON:0000200!4.21e-10!6;UBERON:0001894!8.03e-10!7;UBERON:0006222!8.03e-10!7;UBERON:0000007!2.31e-09!2;UBERON:0000369!2.73e-09!4;UBERON:0002435!2.73e-09!4;UBERON:0000204!2.73e-09!4;UBERON:0010082!2.73e-09!4;UBERON:0000025!4.92e-08!194;UBERON:0000483!2.62e-07!309;UBERON:0000119!3.64e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;5.74e-23;4!UBERON:0010133;5.74e-23;4!UBERON:0001894;1.40e-13;7!UBERON:0001905;1.85e-12;2!UBERON:0002757;1.85e-12;2!UBERON:0010134;1.85e-12;2!UBERON:0005408;1.85e-12;2!UBERON:0001899;1.85e-12;2!UBERON:0000007;2.90e-12;2!UBERON:0002780;5.72e-07;41!UBERON:0001890;5.72e-07;41!UBERON:0002784;7.27e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,7.18e-23,4;UBERON:0010133,7.18e-23,4;UBERON:0001894,1.58e-13,7;UBERON:0006222,1.58e-13,7;UBERON:0001905,2.07e-12,2;UBERON:0002757,2.07e-12,2;UBERON:0010134,2.07e-12,2;UBERON:0005408,2.07e-12,2;UBERON:0001899,2.07e-12,2;UBERON:0000007,3.24e-12,2;UBERON:0003056,4.81e-09,61;UBERON:0002780,9.81e-09,41;UBERON:0001890,9.81e-09,41;UBERON:0003080,9.81e-09,41;UBERON:0006240,9.81e-09,41;UBERON:0000955,5.04e-08,68;UBERON:0006238,5.04e-08,68;UBERON:0010371,1.62e-07,104;UBERON:0000073,7.27e-07,53;UBERON:0002616,7.27e-07,53;UBERON:0002784,7.70e-07,4;UBERON:0001017,8.84e-07,81;UBERON:0003075,8.84e-07,82;UBERON:0007284,8.84e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7774258493143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,1.72371686620732,0,0.347249989866585,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702793337176017,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,2.25980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0,1.40500471742064,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,1.64092442705466,0,0,0,0,0,2.01770233331294,1.21393120847326,0.455324382702595,0,0,0,0.135939465953663,0,0,0,0,0.628462359664008,0,0,0,0,0.285906176706625,4.58239474024907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549702583727146,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7774258493143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,1.72371686620732,0,0.347249989866585,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702793337176017,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,2.25980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0,1.40500471742064,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,1.64092442705466,0,0,0,0,0,2.01770233331294,1.21393120847326,0.455324382702595,0,0,0,0.135939465953663,0,0,0,0,0.628462359664008,0,0,0,0,0.285906176706625,4.58239474024907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549702583727146,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:35043922..35043932,- | |||
}} | }} |
Latest revision as of 00:58, 25 July 2015
Short description: | p@chr15:35043922..35043932, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:35043922..35043932, - |
Coexpression cluster: | C1736_retinoblastoma_eye_pituitary_Wilms_pineal_small_retina |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.90e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 7.18e-23 | 4 |
neuroendocrine gland | 7.18e-23 | 4 |
diencephalon | 1.58e-13 | 7 |
future diencephalon | 1.58e-13 | 7 |
pineal body | 2.07e-12 | 2 |
regional part of epithalamus | 2.07e-12 | 2 |
secretory circumventricular organ | 2.07e-12 | 2 |
circumventricular organ | 2.07e-12 | 2 |
epithalamus | 2.07e-12 | 2 |
pituitary gland | 3.24e-12 | 2 |
pre-chordal neural plate | 4.81e-09 | 61 |
regional part of forebrain | 9.81e-09 | 41 |
forebrain | 9.81e-09 | 41 |
anterior neural tube | 9.81e-09 | 41 |
future forebrain | 9.81e-09 | 41 |
brain | 5.04e-08 | 68 |
future brain | 5.04e-08 | 68 |
ecto-epithelium | 1.62e-07 | 104 |
regional part of nervous system | 7.27e-07 | 53 |
regional part of brain | 7.27e-07 | 53 |
regional part of diencephalon | 7.70e-07 | 4 |
central nervous system | 8.84e-07 | 81 |
neural plate | 8.84e-07 | 82 |
presumptive neural plate | 8.84e-07 | 82 |