FFCP PHASE1:Hg19::chr16:31469962..31470011,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:31469962..31470011,+ to FFCP PHASE1:Hg19::chr16:31469962..31470011,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79798 | |EntrezGene=79798 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25781 | |HGNC=25781 | ||
|TSSclassifier=strong | |||
|UniProt=F5H156 | |UniProt=F5H156 | ||
|association_with_transcript=-256bp_to_ENST00000538189,uc010vfo.1_5end | |||
|cluster_id=chr16:31469962..31470011,+ | |||
|description=CAGE_peak_2_at_ARMC5_5end | |||
|id=chr16:31469962..31470011,+ | |||
|ontology_enrichment_celltype=CL:0000048!2.58e-21!430;CL:0000723!7.35e-20!436;CL:0000115!5.54e-19!35;CL:0000034!8.32e-19!444;CL:0000222!6.39e-18!119;CL:0002371!9.85e-18!591;CL:0002139!4.67e-16!24;CL:0000144!1.23e-14!625;CL:0002078!1.56e-14!44;CL:0002320!2.89e-13!365;CL:0000071!4.81e-13!18;CL:0002546!4.81e-13!18;CL:0000213!1.02e-12!57;CL:0000215!1.02e-12!57;CL:0000134!1.16e-12!358;CL:0000055!8.14e-12!180;CL:0000219!2.80e-11!390;CL:0000763!1.37e-10!112;CL:0000049!1.37e-10!112;CL:0000359!3.70e-08!32;CL:0000012!4.89e-08!682;CL:0000548!1.14e-07!679;CL:0000004!1.14e-07!679;CL:0000255!1.14e-07!679;CL:0000680!1.17e-07!57;CL:0000056!1.17e-07!57;CL:0000355!1.17e-07!57;CL:1000413!1.57e-07!9;CL:0000187!4.47e-07!54;CL:0000192!5.30e-07!42;CL:0000514!5.30e-07!42;CL:0000037!7.22e-07!172;CL:0000566!7.22e-07!172;CL:0000557!8.46e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.53e-26;24!CL:0000115;2.40e-24;36!CL:0000071;1.49e-21;18!CL:0002078;3.99e-16;45!CL:1000413;5.09e-12;9!CL:0000213;1.67e-11;58!CL:0000215;1.67e-11;58!CL:0002544;1.75e-08;6!CL:0002543;6.52e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.00e-29,36;CL:0002139,1.01e-26,24;CL:0002078,6.24e-24,45;CL:0000071,1.76e-21,18;CL:0002546,1.76e-21,18;CL:0000213,1.43e-17,58;CL:0000215,1.43e-17,58;CL:0000222,3.95e-15,121;CL:0000048,2.16e-13,427;CL:0000034,8.89e-13,441;CL:0000723,1.07e-12,433;CL:1000413,6.38e-12,9;CL:0000763,2.18e-09,108;CL:0000049,2.18e-09,108;CL:0000134,6.02e-09,354;CL:0002320,6.37e-09,361;CL:0002544,2.04e-08,6;CL:0000219,2.41e-08,386;CL:0002543,6.72e-08,6;CL:0000037,4.86e-07,168;CL:0005020,7.74e-07,6;CL:0002138,7.74e-07,6;CL:0005022,7.74e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.49e-21;18 | |||
|ontology_enrichment_disease=DOID:8692!3.63e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.54e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.07e-10,31;DOID:1240,9.61e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0000055!1.54e-25!69;UBERON:0002049!3.23e-23!79;UBERON:0007798!3.23e-23!79;UBERON:0001981!2.17e-21!60;UBERON:0007500!2.17e-21!60;UBERON:0004537!2.17e-21!60;UBERON:0006965!2.17e-21!60;UBERON:0004872!3.67e-20!84;UBERON:0004535!3.83e-19!110;UBERON:0001009!1.76e-18!113;UBERON:0003081!4.64e-17!216;UBERON:0001637!1.35e-15!42;UBERON:0003509!1.35e-15!42;UBERON:0004572!1.35e-15!42;UBERON:0002204!3.04e-13!167;UBERON:0001986!4.81e-13!18;UBERON:0004638!4.81e-13!18;UBERON:0004852!4.81e-13!18;UBERON:0003914!8.08e-13!118;UBERON:0002384!1.55e-12!375;UBERON:0004573!7.96e-12!33;UBERON:0004571!7.96e-12!33;UBERON:0000487!1.92e-08!22;UBERON:0006914!2.45e-08!25;UBERON:0001134!6.38e-08!61;UBERON:0002036!6.38e-08!61;UBERON:0003082!6.38e-08!61;UBERON:0002385!1.02e-07!63;UBERON:0001015!1.02e-07!63;UBERON:0000383!1.02e-07!63;UBERON:0002405!1.27e-07!115;UBERON:0000947!1.51e-07!21;UBERON:0010191!1.51e-07!21;UBERON:0003915!1.57e-07!9;UBERON:0004700!1.57e-07!9;UBERON:0001917!1.57e-07!9;UBERON:0002371!2.93e-07!80;UBERON:0000490!3.45e-07!138;UBERON:0004290!5.49e-07!70;UBERON:0002193!6.92e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.49e-21;18!UBERON:0001986;1.49e-21;18!UBERON:0004852;1.49e-21;18!UBERON:0000487;2.47e-16;22!UBERON:0006914;2.38e-15;25!UBERON:0001637;8.05e-14;42!UBERON:0003509;8.05e-14;42!UBERON:0004572;8.05e-14;42!UBERON:0007500;1.78e-13;56!UBERON:0001981;1.78e-13;56!UBERON:0004537;1.78e-13;56!UBERON:0000055;2.65e-13;65!UBERON:0003915;5.09e-12;9!UBERON:0004700;5.09e-12;9!UBERON:0001917;5.09e-12;9!UBERON:0004573;7.05e-11;33!UBERON:0004571;7.05e-11;33!UBERON:0002049;4.32e-10;75!UBERON:0007798;4.32e-10;75!UBERON:0000490;1.92e-09;33!UBERON:0003914;9.74e-09;74 | |||
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|phase1_expression=0.726713517082227,1.92690471501885,0.422863212287913,0,0.893922188854576,0,0,0,0,0,2.09340350391728,0,0,0.37129905888014,1.32558950291166,0,0.602694528023977,0.730310090387373,2.92759679274304,1.23121058076788,2.44800829493104,1.88072832886853,0.286235987131057,0,0,0,0,0.314843125254717,4.32700704533794,0.383829398097213,1.39334510984468,3.67768489791571,0.30120591877825,0,0,0,5.5784083473621,2.21598163412751,1.60435557976113,0.868043482863407,0.447830948479849,0.647787332037959,1.03030227053675,1.45398238779565,0.755751887377619,1.94067248950253,1.39457422143411,0.822335776043652,0.309706370895104,0,1.2808035326455,0.945928919554341,0.344745680736619,0,1.35426486594342,1.88242339542605,0.545812300115692,0.224723484445085,0.612167784741805,0.320929027076094,2.55734850319616,0.989553900560148,0.398927315243264,0.852449501065388,0.290209238628584,0.56738522469114,0.622822248995575,1.00499466102697,1.0429658368404,1.3031330682307,0,0.368277635987565,0.949387162322653,0.633765858935825,0.850417199860174,1.25795187305026,1.34794357375794,0.450530678524519,0.803627933485401,0.855038231223746,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0,0,2.24203425192614,1.58030450865046,0.196709770113833,0.393010762749165,0.411202997999018,0,0,0,0,0.779873198196215,0,0.886135578334485,0,0.640456598628376,0.260118695119756,0.164437904603676,0.552700035571697,0.869409257205157,0,0,0,0.226618685395132,0.383220493601921,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0.301150238155546,0.127986611154418,2.49861453104692,0.473554504088034,0,2.01606743224732,2.94184215361858,0.724122019413995,0,2.01210257911091,0.639312809217652,1.0843174571537,1.50401373190767,2.60723734129483,0.795285947051099,1.94653948121054,0,0,0.263504357079378,0.196468613246569,0,0,0.324547393654683,0,0,5.24679373471752,3.43196946468077,8.54352253057999,4.17401055470081,6.881876760849,6.94281003215189,6.78369530308812,5.03399323451887,7.97842321626196,7.31482382878837,3.35941786920128,1.77883131343355,2.67776490211736,4.43112248820062,3.80136052859256,5.85748938115607,4.04429388380456,5.67099363517232,2.41109266367015,3.36794058939255,2.47745257063309,9.19899824795299,8.54339093611316,4.76324534219059,0,7.75560528296651,0,0.993943903390637,2.65924074495618,1.58891016975863,0.573673241497627,1.77334191099179,0.560677600142307,4.2699598291882,3.45334567784024,0.622422070799533,2.82892411346345,1.47115712802113,0.151357427644931,0.576175924479999,0.468642863667593,0.624320153660641,1.1409436430889,0.597794722207204,0.117434498643765,0.161872944368132,0,0.61246251376468,0.982674538494144,0.413303124703062,1.18800285728205,0.247266929278557,0.910161361938026,3.59309070908119,0,0.375355559615893,0.554128230968366,0.438977620880838,1.22595118319608,0.150238058906597,1.13432183160021,1.07633781413317,0,0.635795703478686,0.600182192168805,0.515262646192195,1.03056216018252,0.18611685633159,1.0126579934476,0.584622030967192,0.504867548488229,0.0920498986422993,0.484938170456436,0.355009592516614,0.806016785821122,0.67824236924195,0,1.36373060295417,0.286804595389004,0,0,0,0,0,0,0,0,1.38134921352481,1.39310378409594,0,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0.738155454624648,1.40241773803446,0,1.47008711385542,0,0,1.18157981336281,0,0,0.343135620597051,0.109750285408626,0,0,0.0925884451585296,0.651616610620649,2.07986957055916,0,0,0.117408694235822,3.89789408954899,1.38895653772983,3.23432058798817,0,0,0.984868024349589,0,0.297262324577456,0,0,0.141775097242386,0.358234090811393,0,1.15014803749563,0,9.77337617546809,16.1715930121802,16.8620345497845,11.614303875227,0.190493682876507,0.763976851116555,1.17217447210047,5.13217338068116,0.411309970813294,1.50171528921959,1.14330573052231,0.112131084345361,0,0.51336800074665,0.129271715757778,3.57656445851882,1.690605505112,0.797814349754612,0,0.771622122786426,0,0.532844358032199,0.142977993658148,0.542621605391443,0,1.62868092146868,0.710783897485092,0,0.301439377059586,0,0.499864955910285,0,0,0,1.19812427745791,0,0,1.15825045334063,1.02738161275192,0.716243852959582,0.896681151948218,3.74358444383662,2.58753089831421,1.66845947163673,0.254094624222463,0,0,0,0,0,0,0.828831026872071,0.981531933753119,1.00034104211935,0.813795071099207,0.415941723061614,0.178428988797162,0.473107245101804,0.585707074963566,0,2.27407504055985,2.0694614258501,1.32845119707087,1.65932251687533,0.347534457872331,0.391602314925481,0,0.413536052245775,1.94142780736755,1.921096040462,0.303127571446259,0,0,1.24053903909388,0.920771839728375,1.12264037773229,0.128139149255701,1.02341449813341,1.12597744800525,1.48418066444991,0.308419387605311,0.710246901252508,0.9033987161519,2.07701771673448,0.581051892299796,0,0.40101294060657,0.0920809889358963,0.34444334449382,0.728364672026868,0.262248829918848,0,0,0,0,0.105551628892876,4.54933536283586,1.53084334748864,1.72732732881711,10.7959076883203,0,0.501689773854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| ||
|short_description=p2@ARMC5 | |||
}} | }} |
Latest revision as of 12:36, 16 September 2015
Short description: | p2@ARMC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARMC5_5end |
Coexpression cluster: | NA |
Association with transcript: | -256bp_to_ENST00000538189, uc010vfo.1_5end |
EntrezGene: | ARMC5 |
HGNC: | 25781 |
UniProt: | F5H156 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.00e-29 | 36 |
endothelial cell of vascular tree | 1.01e-26 | 24 |
meso-epithelial cell | 6.24e-24 | 45 |
blood vessel endothelial cell | 1.76e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.76e-21 | 18 |
lining cell | 1.43e-17 | 58 |
barrier cell | 1.43e-17 | 58 |
mesodermal cell | 3.95e-15 | 121 |
multi fate stem cell | 2.16e-13 | 427 |
stem cell | 8.89e-13 | 441 |
somatic stem cell | 1.07e-12 | 433 |
endothelial cell of artery | 6.38e-12 | 9 |
myeloid cell | 2.18e-09 | 108 |
common myeloid progenitor | 2.18e-09 | 108 |
mesenchymal cell | 6.02e-09 | 354 |
connective tissue cell | 6.37e-09 | 361 |
aortic endothelial cell | 2.04e-08 | 6 |
motile cell | 2.41e-08 | 386 |
vein endothelial cell | 6.72e-08 | 6 |
hematopoietic stem cell | 4.86e-07 | 168 |
lymphangioblast | 7.74e-07 | 6 |
endothelial cell of lymphatic vessel | 7.74e-07 | 6 |
vascular lymphangioblast | 7.74e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.04e-26 | 68 |
vasculature | 3.94e-23 | 78 |
vascular system | 3.94e-23 | 78 |
epithelial tube open at both ends | 2.93e-22 | 59 |
blood vessel | 2.93e-22 | 59 |
blood vasculature | 2.93e-22 | 59 |
vascular cord | 2.93e-22 | 59 |
blood vessel endothelium | 1.76e-21 | 18 |
endothelium | 1.76e-21 | 18 |
cardiovascular system endothelium | 1.76e-21 | 18 |
cardiovascular system | 9.41e-21 | 109 |
splanchnic layer of lateral plate mesoderm | 1.05e-19 | 83 |
circulatory system | 1.15e-19 | 112 |
artery | 9.69e-17 | 42 |
arterial blood vessel | 9.69e-17 | 42 |
arterial system | 9.69e-17 | 42 |
lateral plate mesoderm | 1.55e-16 | 203 |
simple squamous epithelium | 2.79e-16 | 22 |
epithelial tube | 4.63e-16 | 117 |
squamous epithelium | 2.62e-15 | 25 |
systemic artery | 1.86e-12 | 33 |
systemic arterial system | 1.86e-12 | 33 |
endothelial tube | 6.38e-12 | 9 |
arterial system endothelium | 6.38e-12 | 9 |
endothelium of artery | 6.38e-12 | 9 |
connective tissue | 1.30e-08 | 371 |
mesoderm | 1.94e-08 | 315 |
mesoderm-derived structure | 1.94e-08 | 315 |
presumptive mesoderm | 1.94e-08 | 315 |
aorta | 6.03e-07 | 21 |
aortic system | 6.03e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.07e-10 | 31 |
leukemia | 9.61e-08 | 39 |