FFCP PHASE1:Hg19::chr17:1972226..1972253,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:1972226..1972253,- to FFCP PHASE1:Hg19::chr17:1972226..1972253,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:1972226..1972253,- | |||
|description=CAGE_peak_at_chr17:1972226..1972253,- | |||
|id=chr17:1972226..1972253,- | |||
|ontology_enrichment_celltype=CL:0000222!3.61e-23!119;CL:0002139!1.94e-19!24;CL:0000115!5.79e-18!35;CL:0000071!2.04e-16!18;CL:0002546!2.04e-16!18;CL:0002078!1.55e-14!44;CL:0000680!4.31e-13!57;CL:0000056!4.31e-13!57;CL:0000355!4.31e-13!57;CL:0000220!7.94e-12!246;CL:0000187!1.16e-11!54;CL:0002321!1.57e-11!248;CL:0000213!2.49e-11!57;CL:0000215!2.49e-11!57;CL:0000183!6.56e-11!59;CL:0000359!9.66e-11!32;CL:0000393!3.23e-10!60;CL:0000211!3.23e-10!60;CL:1000413!6.53e-10!9;CL:0000192!2.53e-09!42;CL:0000514!2.53e-09!42;CL:0000055!2.01e-08!180;CL:0002539!3.30e-08!10;CL:0002544!1.69e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.80e-20;24!CL:0000115;1.74e-18;36!CL:0000071;2.26e-16;18!CL:0002078;2.09e-12;45!CL:0000359;1.65e-11;32!CL:0002144;3.06e-11;3!CL:0002582;1.93e-10;3!CL:0002544;1.06e-08;6!CL:1000413;1.32e-08;9!CL:0002583;4.93e-08;2!CL:0002545;1.43e-07;2!CL:0002539;1.64e-07;10!CL:0002593;1.80e-07;2!CL:0000213;3.27e-07;58!CL:0000215;3.27e-07;58!CL:0002334;9.26e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.97e-22,36;CL:0002139,3.32e-20,24;CL:0000222,6.01e-19,121;CL:0002078,7.93e-17,45;CL:0000071,1.97e-16,18;CL:0002546,1.97e-16,18;CL:0000213,4.18e-12,58;CL:0000215,4.18e-12,58;CL:0000359,1.46e-11,32;CL:0002144,2.94e-11,3;CL:0002582,1.49e-10,3;CL:0002321,1.17e-09,250;CL:0000192,1.53e-09,43;CL:0000514,1.53e-09,43;CL:0000187,2.43e-09,55;CL:0002544,4.92e-09,6;CL:1000413,9.02e-09,9;CL:0000680,1.10e-08,58;CL:0000056,1.10e-08,58;CL:0000355,1.10e-08,58;CL:0000393,4.27e-08,61;CL:0000211,4.27e-08,61;CL:0002583,4.72e-08,2;CL:0002545,1.05e-07,2;CL:0002593,1.62e-07,2;CL:0002539,1.99e-07,10;CL:0002334,8.22e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;2.26e-16;18!CL:0000222;4.16e-07;121 | |||
|ontology_enrichment_disease=DOID:2394!2.69e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.58e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.99e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000055!1.41e-24!69;UBERON:0002049!1.59e-24!79;UBERON:0007798!1.59e-24!79;UBERON:0001981!3.19e-23!60;UBERON:0007500!3.19e-23!60;UBERON:0004537!3.19e-23!60;UBERON:0006965!3.19e-23!60;UBERON:0004872!1.33e-20!84;UBERON:0004535!9.38e-20!110;UBERON:0001009!1.67e-19!113;UBERON:0001637!1.70e-18!42;UBERON:0003509!1.70e-18!42;UBERON:0004572!1.70e-18!42;UBERON:0003914!6.19e-18!118;UBERON:0001986!2.04e-16!18;UBERON:0004638!2.04e-16!18;UBERON:0004852!2.04e-16!18;UBERON:0000490!2.92e-16!138;UBERON:0000487!3.32e-16!22;UBERON:0006914!2.06e-13!25;UBERON:0004573!3.27e-13!33;UBERON:0004571!3.27e-13!33;UBERON:0004111!2.43e-12!241;UBERON:0000025!1.28e-11!194;UBERON:0002385!1.55e-11!63;UBERON:0001015!1.55e-11!63;UBERON:0000383!1.55e-11!63;UBERON:0001134!1.63e-11!61;UBERON:0002036!1.63e-11!61;UBERON:0003082!1.63e-11!61;UBERON:0000119!3.52e-11!312;UBERON:0000947!1.20e-10!21;UBERON:0010191!1.20e-10!21;UBERON:0000483!1.85e-10!309;UBERON:0004290!2.95e-10!70;UBERON:0000477!3.86e-10!286;UBERON:0003915!6.53e-10!9;UBERON:0004700!6.53e-10!9;UBERON:0001917!6.53e-10!9;UBERON:0004237!3.30e-08!10;UBERON:0004695!3.30e-08!10;UBERON:0002111!3.30e-08!10;UBERON:0004178!3.30e-08!10;UBERON:0000486!7.62e-08!82;UBERON:0005256!2.82e-07!143;UBERON:0000914!4.79e-07!83;UBERON:0002329!4.79e-07!83;UBERON:0003077!4.79e-07!83;UBERON:0003059!4.79e-07!83;UBERON:0007282!4.79e-07!83;UBERON:0009618!4.79e-07!83;UBERON:0007285!4.79e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;6.18e-19;22!UBERON:0004638;2.26e-16;18!UBERON:0001986;2.26e-16;18!UBERON:0004852;2.26e-16;18!UBERON:0006914;2.51e-16;25!UBERON:0000055;4.46e-15;65!UBERON:0004573;2.68e-14;33!UBERON:0004571;2.68e-14;33!UBERON:0003914;1.92e-13;74!UBERON:0001637;9.89e-13;42!UBERON:0003509;9.89e-13;42!UBERON:0004572;9.89e-13;42!UBERON:0007500;2.02e-12;56!UBERON:0001981;2.02e-12;56!UBERON:0004537;2.02e-12;56!UBERON:0010523;3.06e-11;3!UBERON:0001915;3.06e-11;3!UBERON:0001982;3.06e-11;3!UBERON:0000490;8.73e-11;33!UBERON:0002049;1.56e-10;75!UBERON:0007798;1.56e-10;75!UBERON:0000947;1.93e-10;21!UBERON:0010191;1.93e-10;21!UBERON:0003915;1.32e-08;9!UBERON:0004700;1.32e-08;9!UBERON:0001917;1.32e-08;9!UBERON:0002119;7.10e-08;4!UBERON:0005800;1.43e-07;2!UBERON:0001515;1.43e-07;2!UBERON:0004237;1.64e-07;10!UBERON:0004695;1.64e-07;10!UBERON:0002111;1.64e-07;10!UBERON:0004178;1.64e-07;10!UBERON:0002456;1.80e-07;2!UBERON:0000025;1.83e-07;93 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.77e-27,68;UBERON:0007500,3.50e-25,59;UBERON:0001981,3.50e-25,59;UBERON:0004537,3.50e-25,59;UBERON:0006965,3.50e-25,59;UBERON:0002049,4.90e-23,78;UBERON:0007798,4.90e-23,78;UBERON:0004872,5.72e-21,83;UBERON:0000487,5.03e-19,22;UBERON:0003914,2.57e-18,117;UBERON:0001637,1.42e-17,42;UBERON:0003509,1.42e-17,42;UBERON:0004572,1.42e-17,42;UBERON:0004535,4.35e-17,109;UBERON:0001009,1.97e-16,112;UBERON:0004638,1.97e-16,18;UBERON:0001986,1.97e-16,18;UBERON:0004852,1.97e-16,18;UBERON:0006914,2.10e-16,25;UBERON:0004573,8.97e-16,33;UBERON:0004571,8.97e-16,33;UBERON:0010523,2.94e-11,3;UBERON:0001915,2.94e-11,3;UBERON:0001982,2.94e-11,3;UBERON:0000490,9.27e-11,148;UBERON:0000947,1.43e-10,21;UBERON:0010191,1.43e-10,21;UBERON:0007503,6.40e-10,78;UBERON:0000926,8.63e-10,315;UBERON:0004120,8.63e-10,315;UBERON:0006603,8.63e-10,315;UBERON:0003915,9.02e-09,9;UBERON:0004700,9.02e-09,9;UBERON:0001917,9.02e-09,9;UBERON:0000025,3.86e-08,192;UBERON:0003081,5.41e-08,203;UBERON:0002119,6.13e-08,4;UBERON:0001134,6.52e-08,62;UBERON:0002036,6.52e-08,62;UBERON:0003082,6.52e-08,62;UBERON:0005800,1.05e-07,2;UBERON:0001515,1.05e-07,2;UBERON:0002385,1.45e-07,64;UBERON:0001015,1.45e-07,64;UBERON:0000383,1.45e-07,64;UBERON:0002329,1.57e-07,71;UBERON:0003059,1.57e-07,71;UBERON:0007282,1.57e-07,71;UBERON:0004290,1.57e-07,71;UBERON:0009618,1.57e-07,71;UBERON:0002456,1.62e-07,2;UBERON:0004237,1.99e-07,10;UBERON:0004695,1.99e-07,10;UBERON:0002111,1.99e-07,10;UBERON:0004178,1.99e-07,10;UBERON:0003077,2.24e-07,72;UBERON:0007285,2.24e-07,72;UBERON:0007524,3.14e-07,73;UBERON:0004111,6.07e-07,240 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,3.68600904752263,0.697801167972428,0,0,0,0,1.34465029290355,1.20538905604795,0,0.975865597581014,0.369363174230364,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.378139268656271,0.221729397462564,0.614843499851882,0,0,0,0,0,0,0,0,0,0.79504962946682,1.72046919021225,1.73570250803797,0.56530794192401,0.419499436209906,1.10047216776027,0.835979866147242,1.8089173141853,1.06729878806013,4.68608857870538,2.81980521976403,7.60272105718513,3.1728067481262,3.30896772311282,1.62028389576352,1.07159673940896,0.44905874525234,0.675668882899933,0,0.949265659568129,5.1296488300514,0,0,0,0,0,0,0,0,0,1.06748995729705,0.49333509683432,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.717558542755448,0,0,1.20036438433761,0.412210116953756,0,0,0.675105328965065,0.194874010322397,0.757301322732344,0.184099797284599,0,0.710019185033229,0.503760491138201,0.67824236924195,0.386521706326594,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79409734952577,0,1.98013371716565,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0.537182889719687,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0.215714200818617,0,0,1.66435439510497,0,0,0.460385919864187,0,0,0,0.160853921143607,0,6.32259744590888,2.66342587969691,1.97105174433142,7.2695620085707,1.16210378459959,0,0,0,0.114814448164607,0.546273504020151,0.393373244878272,0.451199612907412,0.15403067420883,0.784349769176855,0,0,1.13733384070897,9.52524749548488,0.215915916102139,3.08454505380579,0,0,0,0.831076008928724,0,0,0,0.512900250232778,0,0,0.103041011647722,0,0,1.14853107599234,0,0,0.290012154876366,0.154048617114644,0.307007349452259,1.10269257987624,0.107420244868274,0,0.170453254832202,0,0,0,0.510450849978337,0,0.464845549297286,0.31481234683064,1.3940745403212,0.616067160352178,1.06461206063404,1.73986598415015,0.74129687641568,0,0,0,0.190630193923825,0,0,0,1.56989728039846,0,0,0,2.02182481573316,0,3.79132610615083,0,1.46228093778771,2.11300293513511,0.272999822815972,0.424216295861138,0,0.551365343546124,0,0,0,0,0.608731130888112,1.239293992399,1.40847801266121,0,0,0.7133421029625,3.19284957663538,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0.426851060090485,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42068073403207,0,0,0,0,0.281338832821026,0.222617410045812,0.494411622680279,0,0.19924798825107,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0.457987967009312,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.859930162358083,0,0,0,0.0969890164884194,0,0.677942222341597,0.959293472527256,2.38457534043588,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0,0,0,0,2.87149209830726,0,0,0.223171457441873,0.201550417460179,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,1.63293680054705,0,0,0,0.113312091520126,0,0,0,0.66116300871345,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0,0.124192805882767,0,0,0,0,1.41159491818903,0,0,1.19403842309499,0.233713309847224,0,0,0,0,0,0,0.310874401165561,1.03498604992744,4.14171594625626,0,1.24210365501008,1.65882483136342,1.32920857278997,3.1304703708704,0,0,1.62748293281865,0.727394636810238,0.751873899297419,0.928067519756987,1.59238355479446,1.20008329398946,0.686791410365586,0.336749488765919,0,0.192619830407303,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0.706756583783524,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,6.21323933454091,0,0.300841313397029,0.40341013740704,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.339848664884159,0,0,0.444925607568277,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.511280428554946,0,0,0,1.91107787795487,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0.297046400327086,0,0.339854229375634,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.2068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| ||
|short_description=p@chr17:1972226..1972253,- | |||
}} | }} |
Latest revision as of 14:35, 25 July 2015
Short description: | p@chr17:1972226..1972253, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:1972226..1972253, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.97e-22 | 36 |
endothelial cell of vascular tree | 3.32e-20 | 24 |
mesodermal cell | 6.01e-19 | 121 |
meso-epithelial cell | 7.93e-17 | 45 |
blood vessel endothelial cell | 1.97e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.97e-16 | 18 |
lining cell | 4.18e-12 | 58 |
barrier cell | 4.18e-12 | 58 |
vascular associated smooth muscle cell | 1.46e-11 | 32 |
capillary endothelial cell | 2.94e-11 | 3 |
visceral preadipocyte | 1.49e-10 | 3 |
embryonic cell | 1.17e-09 | 250 |
smooth muscle cell | 1.53e-09 | 43 |
smooth muscle myoblast | 1.53e-09 | 43 |
muscle cell | 2.43e-09 | 55 |
aortic endothelial cell | 4.92e-09 | 6 |
endothelial cell of artery | 9.02e-09 | 9 |
muscle precursor cell | 1.10e-08 | 58 |
myoblast | 1.10e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.10e-08 | 58 |
electrically responsive cell | 4.27e-08 | 61 |
electrically active cell | 4.27e-08 | 61 |
subcutaneous preadipocyte | 4.72e-08 | 2 |
thoracic aorta endothelial cell | 1.05e-07 | 2 |
smooth muscle cell of the internal thoracic artery | 1.62e-07 | 2 |
aortic smooth muscle cell | 1.99e-07 | 10 |
preadipocyte | 8.22e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.99e-10 | 14 |