FFCP PHASE1:Hg19::chr19:42894442..42894451,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:42894442..42894451,- to FFCP PHASE1:Hg19::chr19:42894442..42894451,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84518 | |EntrezGene=84518 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30183 | |HGNC=30183 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYD5 | |UniProt=Q9BYD5 | ||
|association_with_transcript=0bp_to_ENST00000222032,NM_032488,uc002otp.3,uc002otq.3_5end | |||
|cluster_id=chr19:42894442..42894451,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_1_at_CNFN_5end | |||
|id=chr19:42894442..42894451,- | |||
|ontology_enrichment_celltype=CL:0002076!2.94e-13!43;CL:0002368!2.29e-10!13;CL:0002159!1.33e-09!13;CL:0000622!3.09e-09!5;CL:0000223!1.08e-08!59;CL:0002077!1.19e-08!33;CL:0000453!2.52e-08!5;CL:0000066!7.50e-08!254;CL:0000154!1.45e-07!6;CL:0000244!5.51e-07!4;CL:0000731!5.51e-07!4;CL:0002251!6.60e-07!21;CL:0002322!6.87e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.24e-16;14!CL:0000622;4.51e-16;5!CL:0002076;2.56e-14;42!CL:0000154;2.52e-13;6!CL:0002368;5.80e-13;13!CL:0000244;7.74e-12;4!CL:0000731;7.74e-12;4!CL:0002077;2.07e-11;34!CL:0002202;2.45e-11;9!CL:0002632;2.45e-11;9!CL:0002623;2.88e-10;3!CL:0002621;8.86e-10;3!CL:0000453;8.94e-10;5!CL:0002328;1.27e-09;3!CL:0000307;1.95e-09;3!CL:0000362;8.92e-09;9!CL:0000150;9.67e-09;9!CL:0002251;1.94e-08;20!CL:0000240;2.11e-08;6!CL:0000311;2.11e-08;6!CL:0000079;2.11e-08;6!CL:0000237;2.11e-08;6!CL:0000317;1.68e-07;2!CL:1000448;1.68e-07;2!CL:0002308;1.68e-07;2!CL:0002140;1.68e-07;2!CL:0000575;2.95e-07;2!CL:0001014;3.49e-07;2!CL:0001016;3.49e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.14e-18,42;CL:0002159,1.25e-16,14;CL:0000622,4.66e-16,5;CL:0000154,2.58e-13,6;CL:0002368,5.47e-13,13;CL:0002077,4.41e-12,34;CL:0000223,5.90e-12,58;CL:0000244,8.09e-12,4;CL:0000731,8.09e-12,4;CL:0002202,2.57e-11,9;CL:0002632,2.57e-11,9;CL:0002623,2.97e-10,3;CL:0002621,8.61e-10,3;CL:0000453,9.59e-10,5;CL:0002328,1.35e-09,3;CL:0000068,1.98e-09,3;CL:0000069,1.98e-09,3;CL:0000307,1.98e-09,3;CL:0000377,1.98e-09,3;CL:0000362,8.92e-09,9;CL:0000150,9.84e-09,9;CL:0002251,1.91e-08,20;CL:0000240,2.05e-08,6;CL:0000311,2.05e-08,6;CL:0000079,2.05e-08,6;CL:0000237,2.05e-08,6;CL:0000036,2.05e-08,6;CL:0000357,2.05e-08,6;CL:0000114,2.05e-08,6;CL:0000317,1.69e-07,2;CL:1000448,1.69e-07,2;CL:0002308,1.69e-07,2;CL:0002140,1.69e-07,2;CL:0000066,2.53e-07,253;CL:0000575,2.95e-07,2;CL:0001014,3.55e-07,2;CL:0001016,3.55e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;1.95e-09;3!CL:0000357;2.11e-08;6!CL:0000114;2.11e-08;6!CL:0000223;1.78e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!3.92e-14!72;UBERON:0004119!1.05e-11!169;UBERON:0000925!1.05e-11!169;UBERON:0006595!1.05e-11!169;UBERON:0000166!1.70e-10!21;UBERON:0000161!8.39e-10!35;UBERON:0000165!3.27e-08!28;UBERON:0000930!3.27e-08!28;UBERON:0000065!3.30e-08!53;UBERON:0000365!6.15e-08!5;UBERON:0001007!2.25e-07!155;UBERON:0001555!2.25e-07!155;UBERON:0007026!2.25e-07!155;UBERON:0003102!8.62e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;1.85e-11;15!UBERON:0001558;1.85e-11;15!UBERON:0000165;3.32e-11;28!UBERON:0000486;3.63e-11;12!UBERON:0003126;1.71e-10;7!UBERON:0001005;1.71e-10;7!UBERON:0001949;8.86e-10;3!UBERON:0004815;1.27e-09;3!UBERON:0002031;1.27e-09;3!UBERON:0000365;1.76e-09;5!UBERON:0000161;2.85e-09;19!UBERON:0000166;2.85e-09;19!UBERON:0001044;1.27e-08;6!UBERON:0003293;1.27e-08;6!UBERON:0003294;1.27e-08;6!UBERON:0010047;1.27e-08;6!UBERON:0003408;1.27e-08;6!UBERON:0000167;1.27e-08;6!UBERON:0005910;6.64e-08;6!UBERON:0001041;1.49e-07;14!UBERON:0002419;1.68e-07;2!UBERON:0007771;1.68e-07;2!UBERON:0003297;1.68e-07;2!UBERON:0001821;1.68e-07;2!UBERON:0003487;1.68e-07;2!UBERON:0001820;1.68e-07;2!UBERON:0001003;4.04e-07;15!UBERON:0007376;4.04e-07;15!UBERON:0003127;4.52e-07;2!UBERON:0000153;8.36e-07;54!UBERON:0002370;9.83e-07;2!UBERON:0005058;9.83e-07;2!UBERON:0009113;9.83e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,5.06e-14,74;UBERON:0000166,1.68e-12,22;UBERON:0003102,9.65e-12,99;UBERON:0000153,1.44e-11,62;UBERON:0007811,1.44e-11,62;UBERON:0007196,1.86e-11,15;UBERON:0001558,1.86e-11,15;UBERON:0000165,9.63e-11,29;UBERON:0000930,9.63e-11,29;UBERON:0003126,1.66e-10,7;UBERON:0001005,1.66e-10,7;UBERON:0003408,1.72e-10,10;UBERON:0001949,8.61e-10,3;UBERON:0004119,8.65e-10,160;UBERON:0000925,8.65e-10,160;UBERON:0006595,8.65e-10,160;UBERON:0004815,1.35e-09,3;UBERON:0002031,1.35e-09,3;UBERON:0000365,1.83e-09,5;UBERON:0000065,6.78e-09,54;UBERON:0000033,7.79e-09,56;UBERON:0001044,1.28e-08,6;UBERON:0003293,1.28e-08,6;UBERON:0003294,1.28e-08,6;UBERON:0010047,1.28e-08,6;UBERON:0000167,1.28e-08,6;UBERON:0000161,2.95e-08,36;UBERON:0000072,5.44e-08,47;UBERON:0001041,5.88e-08,87;UBERON:0005910,6.84e-08,6;UBERON:0001444,8.58e-08,49;UBERON:0001042,9.13e-08,10;UBERON:0009145,9.13e-08,10;UBERON:0002419,1.69e-07,2;UBERON:0007771,1.69e-07,2;UBERON:0003297,1.69e-07,2;UBERON:0001821,1.69e-07,2;UBERON:0003487,1.69e-07,2;UBERON:0001820,1.69e-07,2;UBERON:0005089,1.69e-07,2;UBERON:0005088,1.69e-07,2;UBERON:0001003,4.04e-07,15;UBERON:0007376,4.04e-07,15;UBERON:0007383,4.04e-07,15;UBERON:0003127,4.26e-07,2;UBERON:0006562,5.08e-07,11;UBERON:0005178,6.72e-07,34;UBERON:0002224,6.72e-07,34 | |||
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| ||
|short_description=p1@CNFN | |||
}} | }} |
Latest revision as of 09:27, 18 September 2015
Short description: | p1@CNFN |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNFN_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_ENST00000222032, NM_032488, uc002otp.3, uc002otq.3_5end |
EntrezGene: | CNFN |
HGNC: | 30183 |
UniProt: | Q9BYD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data