FFCP PHASE1:Hg19::chr19:5690266..5690296,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:5690266..5690296,+ to FFCP PHASE1:Hg19::chr19:5690266..5690296,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25873 | |EntrezGene=25873 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13631 | |HGNC=13631 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y3U8 | |UniProt=Q9Y3U8 | ||
|association_with_transcript=0bp_to_ENST00000347512,NM_033643,uc002mcv.2_5end | |||
|cluster_id=chr19:5690266..5690296,+ | |||
|coexpression_cluster_id=C447 | |||
|description=CAGE_peak_2_at_RPL36_5end | |||
|id=chr19:5690266..5690296,+ | |||
|ontology_enrichment_celltype=CL:0002321!3.63e-33!248;CL:0000220!1.03e-32!246;CL:0000548!1.50e-31!679;CL:0000004!1.50e-31!679;CL:0000255!1.50e-31!679;CL:0000012!2.67e-31!682;CL:0000222!1.95e-24!119;CL:0000144!3.49e-24!625;CL:0002371!1.41e-20!591;CL:0000183!2.22e-19!59;CL:0000055!1.80e-18!180;CL:0000393!3.08e-18!60;CL:0000211!3.08e-18!60;CL:0000003!4.95e-18!722;CL:0000680!2.25e-17!57;CL:0000056!2.25e-17!57;CL:0000355!2.25e-17!57;CL:0000187!2.86e-17!54;CL:0000066!6.41e-17!254;CL:0000192!5.14e-14!42;CL:0000514!5.14e-14!42;CL:0000359!3.23e-11!32;CL:0002078!2.09e-08!44;CL:0000115!7.39e-08!35;CL:0000071!1.11e-07!18;CL:0002546!1.11e-07!18;CL:0000213!1.29e-07!57;CL:0000215!1.29e-07!57;CL:0000221!1.84e-07!71;CL:0000076!2.11e-07!62;CL:1000449!2.38e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.73e-10;32!CL:0000187;2.81e-10;55!CL:0000192;6.81e-10;43!CL:0000393;3.62e-09;61!CL:0000211;3.62e-09;61!CL:0000071;1.13e-07;18!CL:1000449;1.40e-07;15!CL:0000115;3.82e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.03e-33,250;CL:0000222,6.71e-25,121;CL:0000393,4.09e-18,61;CL:0000211,4.09e-18,61;CL:0000680,2.99e-17,58;CL:0000056,2.99e-17,58;CL:0000355,2.99e-17,58;CL:0000187,3.89e-17,55;CL:0000066,6.91e-17,253;CL:0000192,7.11e-14,43;CL:0000514,7.11e-14,43;CL:0000359,3.23e-11,32;CL:0002078,7.57e-09,45;CL:0000115,2.58e-08,36;CL:0000213,5.22e-08,58;CL:0000215,5.22e-08,58;CL:0000071,1.11e-07,18;CL:0002546,1.11e-07,18;CL:0000221,1.13e-07,72;CL:0000076,1.27e-07,63;CL:1000449,1.43e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;6.81e-10;43!CL:0000355;8.10e-10;58!CL:0002546;1.13e-07;18!CL:0000222;2.52e-07;121 | |||
|ontology_enrichment_disease=DOID:14566!4.25e-07!239;DOID:162!9.64e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.25e-07,239;DOID:162,9.64e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0000486!4.78e-19!82;UBERON:0004290!1.02e-18!70;UBERON:0000914!1.17e-18!83;UBERON:0002329!1.17e-18!83;UBERON:0003077!1.17e-18!83;UBERON:0003059!1.17e-18!83;UBERON:0007282!1.17e-18!83;UBERON:0009618!1.17e-18!83;UBERON:0007285!1.17e-18!83;UBERON:0005256!4.95e-17!143;UBERON:0001134!1.51e-15!61;UBERON:0002036!1.51e-15!61;UBERON:0003082!1.51e-15!61;UBERON:0003104!2.31e-15!238;UBERON:0009142!2.31e-15!238;UBERON:0002049!2.86e-15!79;UBERON:0007798!2.86e-15!79;UBERON:0000490!8.16e-15!138;UBERON:0003914!3.32e-14!118;UBERON:0002385!7.16e-14!63;UBERON:0001015!7.16e-14!63;UBERON:0000383!7.16e-14!63;UBERON:0002100!8.69e-14!216;UBERON:0001981!8.80e-14!60;UBERON:0007500!8.80e-14!60;UBERON:0004537!8.80e-14!60;UBERON:0006965!8.80e-14!60;UBERON:0000055!1.26e-13!69;UBERON:0004872!1.71e-12!84;UBERON:0001637!2.46e-12!42;UBERON:0003509!2.46e-12!42;UBERON:0004572!2.46e-12!42;UBERON:0004535!1.41e-09!110;UBERON:0001009!3.19e-09!113;UBERON:0000119!1.33e-08!312;UBERON:0004573!2.33e-08!33;UBERON:0004571!2.33e-08!33;UBERON:0000487!3.59e-08!22;UBERON:0000483!3.80e-08!309;UBERON:0001986!1.11e-07!18;UBERON:0004638!1.11e-07!18;UBERON:0004852!1.11e-07!18;UBERON:0004211!2.38e-07!16;UBERON:0001285!2.38e-07!16;UBERON:0007684!2.38e-07!16;UBERON:0003220!2.38e-07!16;UBERON:0004208!2.38e-07!16;UBERON:0006914!2.60e-07!25;UBERON:0000481!1.00e-06!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;7.39e-10;74!UBERON:0007500;4.55e-09;56!UBERON:0001981;4.55e-09;56!UBERON:0004537;4.55e-09;56!UBERON:0001637;5.62e-09;42!UBERON:0003509;5.62e-09;42!UBERON:0004572;5.62e-09;42!UBERON:0000487;3.66e-08;22!UBERON:0004638;1.13e-07;18!UBERON:0001986;1.13e-07;18!UBERON:0004852;1.13e-07;18!UBERON:0000490;1.20e-07;33!UBERON:0006555;1.40e-07;15!UBERON:0004819;1.40e-07;15!UBERON:0001285;1.40e-07;15!UBERON:0007684;1.40e-07;15!UBERON:0004573;1.48e-07;33!UBERON:0004571;1.48e-07;33!UBERON:0006914;2.67e-07;25!UBERON:0000055;4.29e-07;65!UBERON:0002049;4.82e-07;75!UBERON:0007798;4.82e-07;75!UBERON:0000025;4.96e-07;93!UBERON:0000353;7.45e-07;15 | |||
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| ||
|short_description=p2@RPL36 | |||
}} | }} |
Latest revision as of 04:15, 20 September 2015
Short description: | p2@RPL36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPL36_5end |
Coexpression cluster: | C447_Alveolar_Bronchial_Smooth_Renal_Tracheal_Keratocytes_Hepatic |
Association with transcript: | 0bp_to_ENST00000347512, NM_033643, uc002mcv.2_5end |
EntrezGene: | RPL36 |
HGNC: | 13631 |
UniProt: | Q9Y3U8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.03e-33 | 250 |
mesodermal cell | 6.71e-25 | 121 |
electrically responsive cell | 4.09e-18 | 61 |
electrically active cell | 4.09e-18 | 61 |
muscle precursor cell | 2.99e-17 | 58 |
myoblast | 2.99e-17 | 58 |
multi-potent skeletal muscle stem cell | 2.99e-17 | 58 |
muscle cell | 3.89e-17 | 55 |
epithelial cell | 6.91e-17 | 253 |
smooth muscle cell | 7.11e-14 | 43 |
smooth muscle myoblast | 7.11e-14 | 43 |
vascular associated smooth muscle cell | 3.23e-11 | 32 |
meso-epithelial cell | 7.57e-09 | 45 |
endothelial cell | 2.58e-08 | 36 |
lining cell | 5.22e-08 | 58 |
barrier cell | 5.22e-08 | 58 |
blood vessel endothelial cell | 1.11e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.11e-07 | 18 |
ectodermal cell | 1.13e-07 | 72 |
squamous epithelial cell | 1.27e-07 | 63 |
epithelial cell of nephron | 1.43e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.25e-07 | 239 |
cancer | 9.64e-07 | 235 |