FFCP PHASE1:Hg19::chr1:114472459..114472472,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:114472459..114472472,+ to FFCP PHASE1:Hg19::chr1:114472459..114472472,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=204851 | |EntrezGene=204851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19006 | |HGNC=19006 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_uc001een.2_5end | |||
|cluster_id=chr1:114472459..114472472,+ | |||
|description=CAGE_peak_4_at_HIPK1_5end | |||
|id=chr1:114472459..114472472,+ | |||
|ontology_enrichment_celltype=CL:0000860!9.87e-13!45;CL:0002057!2.00e-12!42;CL:0000557!1.07e-09!71;CL:0000766!1.29e-09!76;CL:0000839!3.24e-09!70;CL:0000738!6.65e-09!140;CL:0002031!2.90e-08!124;CL:0002009!1.99e-07!65;CL:0000763!4.16e-07!112;CL:0000049!4.16e-07!112;CL:0000037!5.73e-07!172;CL:0000566!5.73e-07!172;CL:0002194!9.42e-07!63;CL:0000576!9.42e-07!63;CL:0000040!9.42e-07!63;CL:0000559!9.42e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.82e-17;33!CL:0002057;8.82e-17;33!CL:0000473;3.56e-11;39!CL:0000234;3.56e-11;39!CL:0000766;3.84e-08;69!CL:0000097;1.35e-07;5!CL:0000775;1.36e-07;3!CL:0000576;2.53e-07;48!CL:0000094;7.75e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.22e-16,72;CL:0000860,7.47e-15,42;CL:0002057,7.47e-15,42;CL:0000738,9.53e-15,136;CL:0000557,4.55e-14,67;CL:0000839,6.15e-13,66;CL:0000473,2.61e-12,48;CL:0000234,2.61e-12,48;CL:0000037,4.88e-12,168;CL:0000763,6.04e-12,108;CL:0000049,6.04e-12,108;CL:0002031,1.12e-11,120;CL:0000988,1.45e-11,177;CL:0002032,2.30e-11,161;CL:0000837,2.30e-11,161;CL:0002009,1.74e-09,61;CL:0002194,8.37e-09,59;CL:0000576,8.37e-09,59;CL:0000040,8.37e-09,59;CL:0000559,8.37e-09,59;CL:0002087,3.81e-08,115;CL:0000097,1.09e-07,5;CL:0002028,1.09e-07,5;CL:0000775,1.70e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.86e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.17e-10!115;UBERON:0002390!8.02e-10!102;UBERON:0003061!8.02e-10!102;UBERON:0002371!1.88e-07!80;UBERON:0002193!5.80e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.89e-13,98;UBERON:0003061,2.89e-13,98;UBERON:0002371,1.37e-11,76;UBERON:0002193,2.95e-11,108;UBERON:0001474,2.98e-10,82;UBERON:0002405,4.86e-09,93;UBERON:0004765,9.17e-09,90;UBERON:0001434,4.68e-08,100;UBERON:0007023,7.13e-08,114;UBERON:0001049,8.32e-07,56;UBERON:0005068,8.32e-07,56;UBERON:0006241,8.32e-07,56;UBERON:0007135,8.32e-07,56 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.281908808191942,1.0007329835313,0,0,0,0.631719873426831,0.261185628199839,0,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0.547497700291537,0.376627918784408,0.534893840235659,0.410502947249729,0.0787107813136792,0,1.15148819429164,0.154816123316076,0,0.30120591877825,1.10926203050036,0.387336002901508,0.142169232487422,0.293600439334847,0,2.60707781711184,0.217010870715852,0.671746422719773,0,0.257575567634187,2.18097358169347,1.13362783106643,0.970336244751265,2.09186133215116,0.411167888021826,0.929119112685311,0.28769239232215,1.5369642391746,0.236482229888585,2.06847408441971,0.645484683583826,4.06279459783025,1.69418105588344,1.36453075028923,0.449446968890169,1.22433556948361,1.28371610830437,1.91801137739712,0.659702600373432,2.59302754908121,1.70489900213078,2.61188314765726,1.13477044938228,1.86846674698672,1.25624332628372,1.5644487552606,0.868755378820466,2.42159801053347,0.368277635987565,0.632924774881769,0.422510572623884,0.212604299965044,0,0.336985893439485,0.600707571366025,0.803627933485401,0.570025487482497,0.59675003159727,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0.764546456250458,0,0,0,0.393419540227666,4.71612915298998,1.85041349099558,0,0.651844533267181,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.25618263945135,0.650296737799391,0.328875809207352,0.276350017785848,0.579606171470105,0.593146252648242,0.267540828089713,0,0.113309342697566,0.766440987203842,0,0,0,0,0,0.451725357233318,0.255973222308837,1.24930726552346,0.473554504088034,0,1.00803371612366,5.61624411145365,1.15859523106239,0,0.670700859703636,0,0,0,0,1.5905718941022,1.45990461090791,0.283604451492204,0.443458794925128,0.351339142772504,0.851363990735132,0,0.741568885568859,0,0.348259474598534,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0.550236083880135,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0,0.267899184852239,0.44905874525234,0.675668882899933,0,0,0,0,3.87780264148325,0,0.496971951695318,0,0.132409180813219,0,0.709336764396714,0,0,0,0,0.134710672069688,0.490385709340376,0.302714855289863,0.576175924479999,0,0,0,0,0.352303495931295,0.161872944368132,0.421352420106746,0,0.368502951935304,0.309977343527296,0,0.989067717114227,0,0,0,0.500474079487857,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0.600182192168805,0.206105058476878,0.257640540045629,0,0.337552664482532,0,0.252433774244115,0.0920498986422993,0.323292113637624,0.355009592516614,0.10075209822764,0,0,0,0,0.487894824518382,0.530119073285941,0.813357600086629,0.518305275076852,0,0.36497735907583,0,0,0,0.928735856063958,0,0.236613600079688,0.168584690078102,0.241011029883482,0.330881918197182,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,1.32438929824395,0.122988438543114,0.171567810298526,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,3.95102198979638,0.858486162094873,0,0,0.445893486866185,0,0.16798212819886,0,0,0.871901815541886,0.383382679165211,1.47798971368783,0.528290604079356,4.14656231081544,3.747118788841,3.91351543621778,0.063497894292169,0,1.17217447210047,0,0,0,0.285826432630578,0,0.87192013766656,0.22001485746285,0.129271715757778,0,0,0.26593811658487,2.08014873822732,0,0,0,0,0.542621605391443,0.823240336780769,0.325736184293735,0,0,0.602878754119172,0,0.499864955910285,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0,0.224170287987055,0.788123040807709,4.9594342217689,1.92514554419623,0,0,0,0,0.637938751653163,4.49404214368309,8.97484377612075,1.24324654030811,0.12269149171914,0.500170521059677,0.271265023699736,0.415941723061614,1.60586089917446,0,0.234282829985426,0.601892199455438,0,0,0,0.184369168541703,0.173767228936166,0,0.686286847621712,0.206768026122887,3.01999881146064,0.640365346820666,0,0,0,0,0,0.561320188866147,0.512556597022804,0.511707249066704,0.482561763430822,0,0.308419387605311,0.355123450626254,0.164254312027618,0,0.232420756919918,0.241718899183244,1.20303882181971,0.460404944679482,0,0.546273504020151,0.524497659837696,0,0,0,0,0.105551628892876,0,0.170093705276516,0.647747748306418,0,0,0,0,0,0.223874754722178,1.09629938322967,0.784306353074702,0,0,0,0.309123034943167,0.732555718546747,0.165018999841176,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0,0.107420244868274,0.290033387828457,0.255679882248303,0.0890320356467374,0.330569830721956,0.768760269460425,0.127612712494584,0.6069466851333,0.464845549297286,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.38126038784765,0,0.855877976067841,0.318203247925937,0.78494864019923,0,0.54907405947211,0,0,0,0.842516912477962,0,0.243713489631284,0,0.409499734223957,0.989838023675989,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,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|phase1_expression=0.363356758541113,0.856402095563933,0.281908808191942,1.0007329835313,0,0,0,0.631719873426831,0.261185628199839,0,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0.547497700291537,0.376627918784408,0.534893840235659,0.410502947249729,0.0787107813136792,0,1.15148819429164,0.154816123316076,0,0.30120591877825,1.10926203050036,0.387336002901508,0.142169232487422,0.293600439334847,0,2.60707781711184,0.217010870715852,0.671746422719773,0,0.257575567634187,2.18097358169347,1.13362783106643,0.970336244751265,2.09186133215116,0.411167888021826,0.929119112685311,0.28769239232215,1.5369642391746,0.236482229888585,2.06847408441971,0.645484683583826,4.06279459783025,1.69418105588344,1.36453075028923,0.449446968890169,1.22433556948361,1.28371610830437,1.91801137739712,0.659702600373432,2.59302754908121,1.70489900213078,2.61188314765726,1.13477044938228,1.86846674698672,1.25624332628372,1.5644487552606,0.868755378820466,2.42159801053347,0.368277635987565,0.632924774881769,0.422510572623884,0.212604299965044,0,0.336985893439485,0.600707571366025,0.803627933485401,0.570025487482497,0.59675003159727,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0.764546456250458,0,0,0,0.393419540227666,4.71612915298998,1.85041349099558,0,0.651844533267181,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.25618263945135,0.650296737799391,0.328875809207352,0.276350017785848,0.579606171470105,0.593146252648242,0.267540828089713,0,0.113309342697566,0.766440987203842,0,0,0,0,0,0.451725357233318,0.255973222308837,1.24930726552346,0.473554504088034,0,1.00803371612366,5.61624411145365,1.15859523106239,0,0.670700859703636,0,0,0,0,1.5905718941022,1.45990461090791,0.283604451492204,0.443458794925128,0.351339142772504,0.851363990735132,0,0.741568885568859,0,0.348259474598534,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0.550236083880135,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0,0.267899184852239,0.44905874525234,0.675668882899933,0,0,0,0,3.87780264148325,0,0.496971951695318,0,0.132409180813219,0,0.709336764396714,0,0,0,0,0.134710672069688,0.490385709340376,0.302714855289863,0.576175924479999,0,0,0,0,0.352303495931295,0.161872944368132,0.421352420106746,0,0.368502951935304,0.309977343527296,0,0.989067717114227,0,0,0,0.500474079487857,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0.600182192168805,0.206105058476878,0.257640540045629,0,0.337552664482532,0,0.252433774244115,0.0920498986422993,0.323292113637624,0.355009592516614,0.10075209822764,0,0,0,0,0.487894824518382,0.530119073285941,0.813357600086629,0.518305275076852,0,0.36497735907583,0,0,0,0.928735856063958,0,0.236613600079688,0.168584690078102,0.241011029883482,0.330881918197182,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,1.32438929824395,0.122988438543114,0.171567810298526,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,3.95102198979638,0.858486162094873,0,0,0.445893486866185,0,0.16798212819886,0,0,0.871901815541886,0.383382679165211,1.47798971368783,0.528290604079356,4.14656231081544,3.747118788841,3.91351543621778,0.063497894292169,0,1.17217447210047,0,0,0,0.285826432630578,0,0.87192013766656,0.22001485746285,0.129271715757778,0,0,0.26593811658487,2.08014873822732,0,0,0,0,0.542621605391443,0.823240336780769,0.325736184293735,0,0,0.602878754119172,0,0.499864955910285,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0,0.224170287987055,0.788123040807709,4.9594342217689,1.92514554419623,0,0,0,0,0.637938751653163,4.49404214368309,8.97484377612075,1.24324654030811,0.12269149171914,0.500170521059677,0.271265023699736,0.415941723061614,1.60586089917446,0,0.234282829985426,0.601892199455438,0,0,0,0.184369168541703,0.173767228936166,0,0.686286847621712,0.206768026122887,3.01999881146064,0.640365346820666,0,0,0,0,0,0.561320188866147,0.512556597022804,0.511707249066704,0.482561763430822,0,0.308419387605311,0.355123450626254,0.164254312027618,0,0.232420756919918,0.241718899183244,1.20303882181971,0.460404944679482,0,0.546273504020151,0.524497659837696,0,0,0,0,0.105551628892876,0,0.170093705276516,0.647747748306418,0,0,0,0,0,0.223874754722178,1.09629938322967,0.784306353074702,0,0,0,0.309123034943167,0.732555718546747,0.165018999841176,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0,0.107420244868274,0.290033387828457,0.255679882248303,0.0890320356467374,0.330569830721956,0.768760269460425,0.127612712494584,0.6069466851333,0.464845549297286,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.38126038784765,0,0.855877976067841,0.318203247925937,0.78494864019923,0,0.54907405947211,0,0,0,0.842516912477962,0,0.243713489631284,0,0.409499734223957,0.989838023675989,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,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| ||
|short_description=p4@HIPK1 | |||
}} | }} |
Latest revision as of 06:28, 16 September 2015
Short description: | p4@HIPK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HIPK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_uc001een.2_5end |
EntrezGene: | HIPK1 |
HGNC: | 19006 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.22e-16 | 72 |
classical monocyte | 7.47e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.47e-15 | 42 |
leukocyte | 9.53e-15 | 136 |
granulocyte monocyte progenitor cell | 4.55e-14 | 67 |
myeloid lineage restricted progenitor cell | 6.15e-13 | 66 |
defensive cell | 2.61e-12 | 48 |
phagocyte | 2.61e-12 | 48 |
hematopoietic stem cell | 4.88e-12 | 168 |
myeloid cell | 6.04e-12 | 108 |
common myeloid progenitor | 6.04e-12 | 108 |
hematopoietic lineage restricted progenitor cell | 1.12e-11 | 120 |
hematopoietic cell | 1.45e-11 | 177 |
hematopoietic oligopotent progenitor cell | 2.30e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.30e-11 | 161 |
macrophage dendritic cell progenitor | 1.74e-09 | 61 |
monopoietic cell | 8.37e-09 | 59 |
monocyte | 8.37e-09 | 59 |
monoblast | 8.37e-09 | 59 |
promonocyte | 8.37e-09 | 59 |
nongranular leukocyte | 3.81e-08 | 115 |
mast cell | 1.09e-07 | 5 |
basophil mast progenitor cell | 1.09e-07 | 5 |
neutrophil | 1.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.89e-13 | 98 |
blood island | 2.89e-13 | 98 |
bone marrow | 1.37e-11 | 76 |
hemolymphoid system | 2.95e-11 | 108 |
bone element | 2.98e-10 | 82 |
immune system | 4.86e-09 | 93 |
skeletal element | 9.17e-09 | 90 |
skeletal system | 4.68e-08 | 100 |
adult organism | 7.13e-08 | 114 |
neural tube | 8.32e-07 | 56 |
neural rod | 8.32e-07 | 56 |
future spinal cord | 8.32e-07 | 56 |
neural keel | 8.32e-07 | 56 |