FFCP PHASE1:Hg19::chr1:11724167..11724197,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:11724167..11724197,+ to FFCP PHASE1:Hg19::chr1:11724167..11724197,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26270 | |EntrezGene=26270 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13585 | |HGNC=13585 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRD1 | |UniProt=Q9NRD1 | ||
|association_with_transcript=0bp_to_ENST00000376753_5end | |||
|cluster_id=chr1:11724167..11724197,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_2_at_FBXO6_5end | |||
|id=chr1:11724167..11724197,+ | |||
|ontology_enrichment_celltype=CL:0000763!2.87e-26!112;CL:0000049!2.87e-26!112;CL:0002009!8.85e-26!65;CL:0000766!1.28e-25!76;CL:0002194!1.53e-24!63;CL:0000576!1.53e-24!63;CL:0000040!1.53e-24!63;CL:0000559!1.53e-24!63;CL:0002057!2.63e-24!42;CL:0000557!2.83e-24!71;CL:0000839!8.69e-23!70;CL:0000860!1.62e-21!45;CL:0000037!2.67e-16!172;CL:0000566!2.67e-16!172;CL:0000738!3.92e-16!140;CL:0000988!5.71e-16!182;CL:0002032!1.29e-15!165;CL:0000837!1.29e-15!165;CL:0002087!4.05e-12!119;CL:0002031!5.35e-12!124 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.42e-28;39!CL:0000234;1.42e-28;39!CL:0000860;9.34e-28;33!CL:0002057;9.34e-28;33!CL:0000576;1.61e-24;48!CL:0000766;7.04e-20;69!CL:0000763;7.88e-10;100!CL:0000990;5.27e-09;8!CL:0000451;2.19e-08;10!CL:0000738;7.26e-08;136!CL:0000235;2.66e-07;6!CL:0000453;3.23e-07;5!CL:0002087;5.09e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.38e-45,61;CL:0000766,7.63e-44,72;CL:0000473,1.06e-43,48;CL:0000234,1.06e-43,48;CL:0002194,3.35e-43,59;CL:0000576,3.35e-43,59;CL:0000040,3.35e-43,59;CL:0000559,3.35e-43,59;CL:0000557,6.00e-41,67;CL:0000839,5.61e-38,66;CL:0000763,7.48e-38,108;CL:0000049,7.48e-38,108;CL:0000860,9.35e-38,42;CL:0002057,9.35e-38,42;CL:0000738,7.89e-28,136;CL:0000037,5.39e-24,168;CL:0002032,8.88e-23,161;CL:0000837,8.88e-23,161;CL:0000988,1.11e-22,177;CL:0002087,1.38e-21,115;CL:0002031,5.56e-20,120;CL:0000990,5.41e-09,8;CL:0002393,2.83e-08,9;CL:0002397,2.83e-08,9;CL:0000451,2.88e-08,10;CL:0000235,3.07e-07,6;CL:0000453,3.45e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.52e-27;42!CL:0000049;1.76e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.24e-24!102;UBERON:0003061!2.24e-24!102;UBERON:0002193!8.07e-24!112;UBERON:0002371!2.74e-18!80;UBERON:0001474!2.88e-16!86;UBERON:0002405!3.02e-15!115;UBERON:0004765!1.88e-14!101;UBERON:0001434!1.88e-14!101;UBERON:0000178!6.01e-07!15;UBERON:0000179!6.01e-07!15;UBERON:0000463!6.01e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.38e-07;15!UBERON:0000179;1.38e-07;15!UBERON:0000463;1.38e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.65e-40,98;UBERON:0003061,2.65e-40,98;UBERON:0002193,4.79e-38,108;UBERON:0002371,1.29e-33,76;UBERON:0002405,6.71e-31,93;UBERON:0001474,1.19e-29,82;UBERON:0004765,7.58e-29,90;UBERON:0001434,7.03e-24,100;UBERON:0003081,2.76e-18,203;UBERON:0002204,1.94e-09,167;UBERON:0000926,4.88e-09,315;UBERON:0004120,4.88e-09,315;UBERON:0006603,4.88e-09,315;UBERON:0000178,7.65e-08,15;UBERON:0000179,7.65e-08,15;UBERON:0000463,7.65e-08,15 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,1.0007329835313,0.893922188854576,0,0,0,0.261185628199839,0,3.48900583986214,2.40285509343189,1.84636884759917,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0,0.687720651731561,0.492603536699674,0.314843125254717,2.75354993794233,0,3.40595471295367,0,2.409647350226,0,0,0,0,1.10799081706375,0.401088894940283,3.03815219002193,6.49354875295781,4.21061765824673,3.09090681161024,0.872389432677388,3.02300754951048,1.21292030593908,2.32429036905685,1.6446715520873,2.16794459626573,38.5507805711682,27.921517011672,36.6547456327307,2.06847408441971,2.5819387343353,1.35426486594342,2.82363509313907,3.82068610080984,1.57306439111559,3.06083892370903,1.92557416245656,4.47535988059329,34.9642378197919,37.8980949481101,43.4749245543348,6.09439401120026,3.40431134814684,4.9825779919646,25.8786125214446,28.6815605131111,22.8048286940372,4.84319602106695,1.84138817993782,4.1140110367315,7.6051903072299,9.14198489849687,7.33805259279316,5.95341745076424,5.40636814229423,3.05378614724452,5.41524213108372,7.9566670879636,6.94123784305609,0,1.63841583378639,0,0,0.400395987036012,0,0,0.954053754535364,0,0.587237189370939,0,0,0,0.526768169550154,0,0,0,1.33749196312542,0,0,0,0.557052284425868,0,0,0,1.0247305578054,1.30059347559878,2.13769275984779,1.38175008892924,1.15921234294021,0.14828656316206,0.267540828089713,0,1.92625882585863,0,0,0.506039384039006,0.95569624297229,0,0,1.35517607169996,0.255973222308837,0,0.710331756132051,0.821127996921047,0.201606743224732,0,0.144824403882799,0,0,0,0,0.50133791063589,0.724232594804119,0,0,0,0.221729397462564,0,0.916853528483988,1.09288586487763,1.11235332835329,5.8418530857843,5.39802185627728,4.91944453919801,0,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0.488124115096339,0,0,0,0,0,0,0,0,2.63560834872127,7.75560528296651,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.245668634623536,0,0,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0.901428353439581,0,0.717558542755448,0.427114777637135,0,0,0.206105058476878,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.201504196455281,0.67824236924195,2.31913023795956,4.90943017063502,0.860413786167011,0,0.265059536642971,0.348581828608555,0.10366105501537,0.504641701751257,0,1.56449532329816,0.643240938192885,0,0,0.721879481669586,0.354920400119532,0,0,0.441175890929576,1.08939722046203,0.237270619111097,0.674156540800822,0.588664395376038,0,0,0,0.4115740113314,0,2.53510069643662,0.982827216677626,0,0,0.614942192715568,0.171567810298526,0.878002283269004,1.1240175325762,0.804231779293047,0.277765335475589,0,0,0,0,0,0.577465791044295,2.31492756288305,0.570762456703795,0.790204397959275,0.858486162094873,4.43190610957315,3.97807250736704,3.12125440806329,1.87467667973554,2.18376766658517,1.84307626415102,0.179117045405697,0.290633938513962,0,0,1.49682337822484,0.207328115540772,0.864719720501769,0.88369703398466,0,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0.871533458600294,0.199945982364114,2.43247561282381,5.02257091432126,2.10833939483032,0,0,0,0.434343920002738,0,0.179060963239896,2.57795831185113,1.18218456121156,1.2937654491571,0.898401253958239,0.254094624222463,0,0,0,0.637938751653163,2.99602809578873,0,3.31532410748828,0,0,0,0.415941723061614,0.535286966391485,0.788512075169673,0.585707074963566,0.601892199455438,2.27407504055985,1.03473071292505,0,0.553107505625109,0,0,0.343143423810856,2.06768026122887,1.94142780736755,2.13455115606889,4.85004114314015,4.99306318531491,2.11673205330776,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,1.02341449813341,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0.362578348774867,1.80455823272956,1.28913384510255,0.34444334449382,0,0.524497659837696,1.35359883872224,0.231046011313244,2.35304930753057,1.46139224653261,0.422206515571503,0,0.340187410553031,0.215915916102139,0,1.08378575017541,1.00337954770971,0.509752546090077,2.49322802678617,1.56712328305525,0,0.261435451024901,0,0,0,1.03041011647722,0.0915694648183434,0.247528499761764,0.574265537996172,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,1.4875642382488,0.192190067365106,1.14851441245126,1.4162089319777,0.464845549297286,0,0,1.23213432070436,0,0,0,0,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0.202182481573316,1.58510321173008,0,0,4.38684281336312,0,0.136499911407986,0.707027159768564,0,0,0,1.31535265576129,0,0,0,0,0,0,0,0,0,0.844430541190656,0.329294892959902,0,0.349934720244983,0.673554789078584,1.34060455107157,1.08890984861323,1.69458841398202,4.7355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|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,1.0007329835313,0.893922188854576,0,0,0,0.261185628199839,0,3.48900583986214,2.40285509343189,1.84636884759917,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0,0.687720651731561,0.492603536699674,0.314843125254717,2.75354993794233,0,3.40595471295367,0,2.409647350226,0,0,0,0,1.10799081706375,0.401088894940283,3.03815219002193,6.49354875295781,4.21061765824673,3.09090681161024,0.872389432677388,3.02300754951048,1.21292030593908,2.32429036905685,1.6446715520873,2.16794459626573,38.5507805711682,27.921517011672,36.6547456327307,2.06847408441971,2.5819387343353,1.35426486594342,2.82363509313907,3.82068610080984,1.57306439111559,3.06083892370903,1.92557416245656,4.47535988059329,34.9642378197919,37.8980949481101,43.4749245543348,6.09439401120026,3.40431134814684,4.9825779919646,25.8786125214446,28.6815605131111,22.8048286940372,4.84319602106695,1.84138817993782,4.1140110367315,7.6051903072299,9.14198489849687,7.33805259279316,5.95341745076424,5.40636814229423,3.05378614724452,5.41524213108372,7.9566670879636,6.94123784305609,0,1.63841583378639,0,0,0.400395987036012,0,0,0.954053754535364,0,0.587237189370939,0,0,0,0.526768169550154,0,0,0,1.33749196312542,0,0,0,0.557052284425868,0,0,0,1.0247305578054,1.30059347559878,2.13769275984779,1.38175008892924,1.15921234294021,0.14828656316206,0.267540828089713,0,1.92625882585863,0,0,0.506039384039006,0.95569624297229,0,0,1.35517607169996,0.255973222308837,0,0.710331756132051,0.821127996921047,0.201606743224732,0,0.144824403882799,0,0,0,0,0.50133791063589,0.724232594804119,0,0,0,0.221729397462564,0,0.916853528483988,1.09288586487763,1.11235332835329,5.8418530857843,5.39802185627728,4.91944453919801,0,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0.488124115096339,0,0,0,0,0,0,0,0,2.63560834872127,7.75560528296651,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.245668634623536,0,0,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0.901428353439581,0,0.717558542755448,0.427114777637135,0,0,0.206105058476878,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.201504196455281,0.67824236924195,2.31913023795956,4.90943017063502,0.860413786167011,0,0.265059536642971,0.348581828608555,0.10366105501537,0.504641701751257,0,1.56449532329816,0.643240938192885,0,0,0.721879481669586,0.354920400119532,0,0,0.441175890929576,1.08939722046203,0.237270619111097,0.674156540800822,0.588664395376038,0,0,0,0.4115740113314,0,2.53510069643662,0.982827216677626,0,0,0.614942192715568,0.171567810298526,0.878002283269004,1.1240175325762,0.804231779293047,0.277765335475589,0,0,0,0,0,0.577465791044295,2.31492756288305,0.570762456703795,0.790204397959275,0.858486162094873,4.43190610957315,3.97807250736704,3.12125440806329,1.87467667973554,2.18376766658517,1.84307626415102,0.179117045405697,0.290633938513962,0,0,1.49682337822484,0.207328115540772,0.864719720501769,0.88369703398466,0,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0.871533458600294,0.199945982364114,2.43247561282381,5.02257091432126,2.10833939483032,0,0,0,0.434343920002738,0,0.179060963239896,2.57795831185113,1.18218456121156,1.2937654491571,0.898401253958239,0.254094624222463,0,0,0,0.637938751653163,2.99602809578873,0,3.31532410748828,0,0,0,0.415941723061614,0.535286966391485,0.788512075169673,0.585707074963566,0.601892199455438,2.27407504055985,1.03473071292505,0,0.553107505625109,0,0,0.343143423810856,2.06768026122887,1.94142780736755,2.13455115606889,4.85004114314015,4.99306318531491,2.11673205330776,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,1.02341449813341,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0.362578348774867,1.80455823272956,1.28913384510255,0.34444334449382,0,0.524497659837696,1.35359883872224,0.231046011313244,2.35304930753057,1.46139224653261,0.422206515571503,0,0.340187410553031,0.215915916102139,0,1.08378575017541,1.00337954770971,0.509752546090077,2.49322802678617,1.56712328305525,0,0.261435451024901,0,0,0,1.03041011647722,0.0915694648183434,0.247528499761764,0.574265537996172,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,1.4875642382488,0.192190067365106,1.14851441245126,1.4162089319777,0.464845549297286,0,0,1.23213432070436,0,0,0,0,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0.202182481573316,1.58510321173008,0,0,4.38684281336312,0,0.136499911407986,0.707027159768564,0,0,0,1.31535265576129,0,0,0,0,0,0,0,0,0,0.844430541190656,0.329294892959902,0,0.349934720244983,0.673554789078584,1.34060455107157,1.08890984861323,1.69458841398202,4.7355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| ||
|short_description=p2@FBXO6 | |||
}} | }} |
Latest revision as of 09:33, 16 September 2015
Short description: | p2@FBXO6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FBXO6_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000376753_5end |
EntrezGene: | FBXO6 |
HGNC: | 13585 |
UniProt: | Q9NRD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.38e-45 | 61 |
myeloid leukocyte | 7.63e-44 | 72 |
defensive cell | 1.06e-43 | 48 |
phagocyte | 1.06e-43 | 48 |
monopoietic cell | 3.35e-43 | 59 |
monocyte | 3.35e-43 | 59 |
monoblast | 3.35e-43 | 59 |
promonocyte | 3.35e-43 | 59 |
granulocyte monocyte progenitor cell | 6.00e-41 | 67 |
myeloid lineage restricted progenitor cell | 5.61e-38 | 66 |
myeloid cell | 7.48e-38 | 108 |
common myeloid progenitor | 7.48e-38 | 108 |
classical monocyte | 9.35e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.35e-38 | 42 |
leukocyte | 7.89e-28 | 136 |
hematopoietic stem cell | 5.39e-24 | 168 |
hematopoietic oligopotent progenitor cell | 8.88e-23 | 161 |
hematopoietic multipotent progenitor cell | 8.88e-23 | 161 |
hematopoietic cell | 1.11e-22 | 177 |
nongranular leukocyte | 1.38e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 5.56e-20 | 120 |
conventional dendritic cell | 5.41e-09 | 8 |
intermediate monocyte | 2.83e-08 | 9 |
CD14-positive, CD16-positive monocyte | 2.83e-08 | 9 |
dendritic cell | 2.88e-08 | 10 |
macrophage | 3.07e-07 | 6 |
Langerhans cell | 3.45e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.65e-40 | 98 |
blood island | 2.65e-40 | 98 |
hemolymphoid system | 4.79e-38 | 108 |
bone marrow | 1.29e-33 | 76 |
immune system | 6.71e-31 | 93 |
bone element | 1.19e-29 | 82 |
skeletal element | 7.58e-29 | 90 |
skeletal system | 7.03e-24 | 100 |
lateral plate mesoderm | 2.76e-18 | 203 |
musculoskeletal system | 1.94e-09 | 167 |
mesoderm | 4.88e-09 | 315 |
mesoderm-derived structure | 4.88e-09 | 315 |
presumptive mesoderm | 4.88e-09 | 315 |
blood | 7.65e-08 | 15 |
haemolymphatic fluid | 7.65e-08 | 15 |
organism substance | 7.65e-08 | 15 |