FFCP PHASE1:Hg19::chr1:158801209..158801216,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:158801209..158801216,+ to FFCP PHASE1:Hg19::chr1:158801209..158801216,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4332 | |EntrezGene=4332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7183 | |HGNC=7183 | ||
|TSSclassifier=strong | |||
|UniProt=P41218,Q5VUU6 | |UniProt=P41218,Q5VUU6 | ||
|association_with_transcript=41bp_to_NM_002432,uc001fsz.1_5end | |||
|cluster_id=chr1:158801209..158801216,+ | |||
|coexpression_cluster_id=C2533 | |||
|description=CAGE_peak_2_at_MNDA_5end | |||
|id=chr1:158801209..158801216,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.76e-71!76;CL:0002194!2.35e-64!63;CL:0000576!2.35e-64!63;CL:0000040!2.35e-64!63;CL:0000559!2.35e-64!63;CL:0002009!2.58e-64!65;CL:0000557!2.06e-57!71;CL:0002057!2.94e-57!42;CL:0000839!3.28e-56!70;CL:0000763!1.60e-55!112;CL:0000049!1.60e-55!112;CL:0000738!9.35e-55!140;CL:0000860!1.69e-52!45;CL:0000037!5.04e-47!172;CL:0000566!5.04e-47!172;CL:0002087!8.70e-47!119;CL:0002032!2.66e-45!165;CL:0000837!2.66e-45!165;CL:0000988!4.34e-43!182;CL:0002031!1.49e-40!124;CL:0002393!1.56e-15!9;CL:0002397!1.56e-15!9;CL:0000094!4.62e-14!8;CL:0000134!4.05e-11!358;CL:0002320!1.67e-10!365;CL:0000081!1.06e-09!11;CL:0000219!2.24e-08!390;CL:0000990!3.42e-07!8;CL:0000775!6.91e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.74e-67;33!CL:0002057;3.74e-67;33!CL:0000576;1.91e-61;48!CL:0000473;1.22e-53;39!CL:0000234;1.22e-53;39!CL:0000766;6.46e-48;69!CL:0000094;1.30e-23;8!CL:0000763;6.53e-22;100!CL:0002393;3.81e-18;6!CL:0002397;3.81e-18;6!CL:0002087;5.35e-17;104!CL:0000081;9.06e-17;11!CL:0000738;3.97e-13;136!CL:0000775;7.13e-11;3!CL:0000875;1.89e-09;3!CL:0002396;1.89e-09;3!CL:0000226;3.38e-09;3!CL:0000842;3.38e-09;3!CL:0000767;4.78e-09;3!CL:0000988;9.85e-09;177!CL:0000771;3.77e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.34e-100,42;CL:0002057,1.34e-100,42;CL:0000766,4.12e-100,72;CL:0000473,2.30e-96,48;CL:0000234,2.30e-96,48;CL:0002194,1.83e-86,59;CL:0000576,1.83e-86,59;CL:0000040,1.83e-86,59;CL:0000559,1.83e-86,59;CL:0002009,2.67e-83,61;CL:0000839,3.22e-76,66;CL:0000557,6.29e-75,67;CL:0000763,1.82e-65,108;CL:0000049,1.82e-65,108;CL:0000738,1.72e-58,136;CL:0002087,4.30e-50,115;CL:0000037,9.69e-47,168;CL:0000988,1.09e-43,177;CL:0002032,1.82e-43,161;CL:0000837,1.82e-43,161;CL:0002031,4.70e-41,120;CL:0002393,5.32e-26,9;CL:0002397,5.32e-26,9;CL:0000094,2.03e-23,8;CL:0000081,1.25e-16,11;CL:0000134,3.78e-15,354;CL:0002320,1.35e-14,361;CL:0000219,1.19e-12,386;CL:0000775,7.02e-11,3;CL:0000048,2.79e-10,427;CL:0000723,5.91e-10,433;CL:0000034,1.56e-09,441;CL:0000875,1.56e-09,3;CL:0002396,1.56e-09,3;CL:0000226,3.54e-09,3;CL:0000842,3.54e-09,3;CL:0000767,7.87e-09,3;CL:0000771,3.55e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;8.35e-73;42!CL:0000049;3.03e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.61e-66!102;UBERON:0003061!4.61e-66!102;UBERON:0002193!6.40e-62!112;UBERON:0002371!5.37e-49!80;UBERON:0001474!2.29e-44!86;UBERON:0002405!6.13e-40!115;UBERON:0004765!3.21e-35!101;UBERON:0001434!3.21e-35!101;UBERON:0003081!2.46e-23!216;UBERON:0002204!2.22e-16!167;UBERON:0000178!2.58e-15!15;UBERON:0000179!2.58e-15!15;UBERON:0000463!2.58e-15!15;UBERON:0002384!3.67e-10!375;UBERON:0007023!6.99e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.43e-26;15!UBERON:0000179;1.43e-26;15!UBERON:0000463;1.43e-26;15!UBERON:0002390;3.17e-12;32!UBERON:0002193;5.12e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.55e-86,98;UBERON:0003061,2.55e-86,98;UBERON:0002193,3.61e-77,108;UBERON:0002371,8.12e-65,76;UBERON:0001474,2.70e-59,82;UBERON:0002405,1.69e-53,93;UBERON:0004765,4.56e-53,90;UBERON:0001434,1.13e-46,100;UBERON:0003081,5.81e-35,203;UBERON:0000178,1.50e-26,15;UBERON:0000179,1.50e-26,15;UBERON:0000463,1.50e-26,15;UBERON:0002204,1.58e-23,167;UBERON:0000926,8.32e-18,315;UBERON:0004120,8.32e-18,315;UBERON:0006603,8.32e-18,315;UBERON:0002384,7.67e-14,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.656804715599566,0.865818594450472,1.18009283054671,2.30297638858328,2.01260960310899,0,0,0,0,0,0,4.43196326825502,2.4065333696417,1.73608696572681,0.895661896959697,1.29557466407592,0.257575567634187,4.50734540216651,8.31327076115381,1.21292030593908,1.85943229524548,2.05583944010913,1.54853185447552,2.3015391385772,3.33008918487831,5.20260905754887,3.10271112662957,3.87290810150296,2.70852973188684,3.76484679085209,1.63743690034707,2.69668181334102,6.12167784741805,4.8139354061414,2.55734850319616,2.63881040149373,2.99195486432448,0,3.77272010217159,2.8369261234557,0,5.27622197039161,5.21482918420201,5.42972111762792,0,4.78760926783834,6.64571013625857,6.5489138756702,8.50417199860174,7.75736988380991,22.1287403358595,21.1749418906524,31.1807638192335,1.71007646244749,3.38158351238453,4.93193215164512,0,0,0,1.70692089026603,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0.895906278080929,2.49861453104692,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.696518949197069,0.797747763113191,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,7.75560528296651,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,2.34004265139238,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21667878966063,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,20.9721966705211,17.9496875522415,22.7928532389819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,2.37285620900479,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,8.62660935694688,1.52927441428475,5.69647187174163,5.71756261098694,3.29089818468955,4.53931317834902,9.72056587028607,4.75875105776562,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0.403599414382095,0.425846237690326,1.71752672377882,0.921722292925374,1.11838053946208,1.83534055883099,0.976940477010201,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984678443688556,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.427149650270779,0.157204305099666,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.654261577023377,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672567444437648,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,1.12780701575824,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.248298857183432,0,0,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0.402547587182052,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.656804715599566,0.865818594450472,1.18009283054671,2.30297638858328,2.01260960310899,0,0,0,0,0,0,4.43196326825502,2.4065333696417,1.73608696572681,0.895661896959697,1.29557466407592,0.257575567634187,4.50734540216651,8.31327076115381,1.21292030593908,1.85943229524548,2.05583944010913,1.54853185447552,2.3015391385772,3.33008918487831,5.20260905754887,3.10271112662957,3.87290810150296,2.70852973188684,3.76484679085209,1.63743690034707,2.69668181334102,6.12167784741805,4.8139354061414,2.55734850319616,2.63881040149373,2.99195486432448,0,3.77272010217159,2.8369261234557,0,5.27622197039161,5.21482918420201,5.42972111762792,0,4.78760926783834,6.64571013625857,6.5489138756702,8.50417199860174,7.75736988380991,22.1287403358595,21.1749418906524,31.1807638192335,1.71007646244749,3.38158351238453,4.93193215164512,0,0,0,1.70692089026603,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0.895906278080929,2.49861453104692,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.696518949197069,0.797747763113191,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,7.75560528296651,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,2.34004265139238,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21667878966063,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,20.9721966705211,17.9496875522415,22.7928532389819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,2.37285620900479,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,8.62660935694688,1.52927441428475,5.69647187174163,5.71756261098694,3.29089818468955,4.53931317834902,9.72056587028607,4.75875105776562,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0.403599414382095,0.425846237690326,1.71752672377882,0.921722292925374,1.11838053946208,1.83534055883099,0.976940477010201,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984678443688556,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.427149650270779,0.157204305099666,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.654261577023377,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672567444437648,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,1.12780701575824,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.248298857183432,0,0,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p2@MNDA | |||
}} | }} |
Latest revision as of 21:38, 17 September 2015
Short description: | p2@MNDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MNDA_5end |
Coexpression cluster: | C2533_CD14_Neutrophils_Whole_Eosinophils_blood_Peripheral_CD14CD16 |
Association with transcript: | 41bp_to_NM_002432, uc001fsz.1_5end |
EntrezGene: | MNDA |
HGNC: | 7183 |
UniProt: | P41218Q5VUU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.55e-86 | 98 |
blood island | 2.55e-86 | 98 |
hemolymphoid system | 3.61e-77 | 108 |
bone marrow | 8.12e-65 | 76 |
bone element | 2.70e-59 | 82 |
immune system | 1.69e-53 | 93 |
skeletal element | 4.56e-53 | 90 |
skeletal system | 1.13e-46 | 100 |
lateral plate mesoderm | 5.81e-35 | 203 |
blood | 1.50e-26 | 15 |
haemolymphatic fluid | 1.50e-26 | 15 |
organism substance | 1.50e-26 | 15 |
musculoskeletal system | 1.58e-23 | 167 |
mesoderm | 8.32e-18 | 315 |
mesoderm-derived structure | 8.32e-18 | 315 |
presumptive mesoderm | 8.32e-18 | 315 |
connective tissue | 7.67e-14 | 371 |