FFCP PHASE1:Hg19::chr1:178096047..178096084,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:178096047..178096084,+ to FFCP PHASE1:Hg19::chr1:178096047..178096084,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:178096047..178096084,+ | |||
|description=CAGE_peak_at_chr1:178096047..178096084,+ | |||
|id=chr1:178096047..178096084,+ | |||
|ontology_enrichment_celltype=CL:0000557!2.92e-12!71;CL:0000063!6.49e-12!578;CL:0000548!1.76e-11!679;CL:0000004!1.76e-11!679;CL:0000255!1.76e-11!679;CL:0000012!4.26e-11!682;CL:0000839!8.39e-11!70;CL:0002009!1.22e-10!65;CL:0002371!2.85e-10!591;CL:0000144!5.44e-10!625;CL:0002194!1.38e-09!63;CL:0000576!1.38e-09!63;CL:0000040!1.38e-09!63;CL:0000559!1.38e-09!63;CL:0000766!2.43e-09!76;CL:0000003!2.33e-07!722;CL:0000990!2.60e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000990;2.17e-19;8!CL:0000235;1.49e-17;6!CL:0000451;1.42e-15;10!CL:0000453;9.87e-14;5!CL:0000473;4.25e-13;39!CL:0000234;4.25e-13;39!CL:0000840;3.70e-12;5!CL:0000860;4.01e-07;33!CL:0002057;4.01e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,1.75e-19,8;CL:0000235,1.65e-17,6;CL:0000557,2.74e-17,67;CL:0002009,4.24e-16,61;CL:0000451,1.19e-15,10;CL:0000839,1.59e-14,66;CL:0000453,8.09e-14,5;CL:0002194,1.19e-13,59;CL:0000576,1.19e-13,59;CL:0000040,1.19e-13,59;CL:0000559,1.19e-13,59;CL:0000766,7.56e-13,72;CL:0000473,1.56e-12,48;CL:0000234,1.56e-12,48;CL:0000840,5.40e-12,5;CL:0001029,5.40e-12,5;CL:0000763,1.69e-11,108;CL:0000049,1.69e-11,108;CL:0000738,8.83e-08,136;CL:0002031,4.82e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.50e-08;3!DOID:127;1.50e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.53e-09,3;DOID:127,8.53e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.92e-13!80;UBERON:0001474!1.28e-11!86;UBERON:0004765!4.86e-11!101;UBERON:0001434!4.86e-11!101;UBERON:0002390!3.79e-08!102;UBERON:0003061!3.79e-08!102;UBERON:0002204!7.30e-08!167;UBERON:0002193!1.93e-07!112;UBERON:0002405!8.32e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.64e-21,76;UBERON:0004765,2.13e-19,90;UBERON:0001474,7.89e-19,82;UBERON:0001434,1.15e-16,100;UBERON:0002405,9.94e-16,93;UBERON:0002390,1.49e-14,98;UBERON:0003061,1.49e-14,98;UBERON:0002193,1.53e-12,108;UBERON:0002204,3.51e-09,167;UBERON:0003081,8.56e-07,203 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0.655324116390517,0,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.314843125254717,0,0,0.154816123316076,0.919421224478927,1.50602959389125,0.739508020333575,0,0,0,0,0,0,0.223915474239924,0.647787332037959,0,0.290796477559129,0.377875943688809,0.242584061187816,0,0.822335776043652,1.54853185447552,1.7261543539329,3.33008918487831,4.25668013799453,0,0.645484683583826,0,0.941211697713023,1.36453075028923,0.898893937780338,0.306083892370903,0.641858054152187,0,1.31940520074686,2.59302754908121,1.70489900213078,0.290209238628584,0.56738522469114,0,2.51248665256743,1.5644487552606,3.25783267057675,0,0.736555271975129,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,1.5905718941022,0.973269740605272,0.0945348171640679,0,0.087834785693126,0,0,0,9.7364218096405,11.8408221363502,8.90818335476397,0,0,0,0.596287222100115,0,0,0,0.419499436209906,0,0,0,0.35576626268671,0,0.402829317109147,1.52054421143703,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,6.75286822147416,0.860509862246441,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,1.87296046098192,1.71141546463335,0.448346041655403,0.352303495931295,0.323745888736263,0.421352420106746,0.204154171254893,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0.554128230968366,0,0,0,0.226864366320042,0.358779271377724,0,0,0.300091096084402,0.206105058476878,0,0,0.506328996723799,0.0974370051611986,0.504867548488229,0.184099797284599,0,0,0.302256294682921,0,0.966304265816484,1.63647672354501,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0.964044119533928,0.110293972732394,0,0,0.404493924480493,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.514703430895577,1.97550513735526,0,0.703702806881416,0.185176890317059,0,0,0,0.115930404975077,0,0.433099343283221,0.462985512576611,0,0,0,11.8184162921951,8.65815781015179,11.2959683339433,0.93733833986777,1.84780341018745,1.41775097242386,0.895585227028483,1.16253575405585,0.766765358330422,1.97065295158377,1.67292024625129,0.414656231081544,0.144119953416961,0.37872730027914,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0.871533458600294,0.499864955910285,7.29742683847143,1.50677127429638,4.21667878966063,0,0,0,2.02693829334611,0.205476322550383,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.713715955188647,0,0,0.601892199455438,0,0,0,0,0.0868836144680828,0,0,0,0,0,1.5156378572313,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0.384417447767103,0,0,0,0.154209693802656,0,1.23190734020714,1.55776328755086,0.348631135379878,0.120859449591622,1.00253235151642,0.276242966807689,0,0.182091168006717,0.131124414959424,1.35359883872224,0.693138033939733,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,1.14853107599234,0.650060246036521,0,0.193341436584244,0.154048617114644,0,0.275673144969061,0.537101224341368,0.145016693914229,0.681813019328807,0,2.64455864577565,0.768760269460425,8.80527716212631,0.10115778085555,0.464845549297286,0.94443704049192,0,0.616067160352178,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0.235624804691373,0.404364963146632,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48332744849418,0,0,0,0,1.92444225451024,2.01090682660736,0,0.188287601553558,1.29151611801369,1.68471475667626,0.443430153536676,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0.307240764308458,0.447352215784832,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,2.14870036263921,0,1.22864280839693,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0.20453736500431,0.123084805461069,0.311039587661807,0.0898683511473268,0.537063524026827,0,0,0,1.11136990144637,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0.832048038078832,0,0.195984794828755,0.34823682632161,0,0.343972064943233,0,0,0,0,0,0,0.959293472527256,0.397429223405979,0.0633107959558787,0,0.561111741760736,0,0,0,0,0,0.576219191952599,0,0,0.135904206073614,0.313808538937,0,0.577901179803038,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,1.1248694577575,2.32140586367385,0.0607495566580247,0,0,0,0.105600336519406,0.179287339332845,0.383830394638891,0,0,0,2.17199840701485,1.72844298240254,1.63293680054705,0,0,0.511164065356265,0,0,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0,0.414239055347196,0,0,0,3.19170628885091,0,0.2506898940227,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0,0.895528817321244,0.467426619694449,1.6644175845078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| ||
|short_description=p@chr1:178096047..178096084,+ | |||
}} | }} |
Latest revision as of 00:47, 28 July 2015
Short description: | p@chr1:178096047..178096084, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:178096047..178096084, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 1.75e-19 | 8 |
macrophage | 1.65e-17 | 6 |
granulocyte monocyte progenitor cell | 2.74e-17 | 67 |
macrophage dendritic cell progenitor | 4.24e-16 | 61 |
dendritic cell | 1.19e-15 | 10 |
myeloid lineage restricted progenitor cell | 1.59e-14 | 66 |
Langerhans cell | 8.09e-14 | 5 |
monopoietic cell | 1.19e-13 | 59 |
monocyte | 1.19e-13 | 59 |
monoblast | 1.19e-13 | 59 |
promonocyte | 1.19e-13 | 59 |
myeloid leukocyte | 7.56e-13 | 72 |
defensive cell | 1.56e-12 | 48 |
phagocyte | 1.56e-12 | 48 |
immature conventional dendritic cell | 5.40e-12 | 5 |
common dendritic progenitor | 5.40e-12 | 5 |
myeloid cell | 1.69e-11 | 108 |
common myeloid progenitor | 1.69e-11 | 108 |
leukocyte | 8.83e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 4.82e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.64e-21 | 76 |
skeletal element | 2.13e-19 | 90 |
bone element | 7.89e-19 | 82 |
skeletal system | 1.15e-16 | 100 |
immune system | 9.94e-16 | 93 |
hematopoietic system | 1.49e-14 | 98 |
blood island | 1.49e-14 | 98 |
hemolymphoid system | 1.53e-12 | 108 |
musculoskeletal system | 3.51e-09 | 167 |
lateral plate mesoderm | 8.56e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.53e-09 | 3 |
leiomyoma | 8.53e-09 | 3 |