FFCP PHASE1:Hg19::chr1:86889837..86889882,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:86889837..86889882,+ to FFCP PHASE1:Hg19::chr1:86889837..86889882,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9635 | |EntrezGene=9635 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2016 | |HGNC=2016 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQC9,E7EUD9 | |UniProt=Q9UQC9,E7EUD9 | ||
|association_with_transcript=68bp_to_ENST00000370565,ENST00000439777,NM_006536,uc001dlr.3_5end | |||
|cluster_id=chr1:86889837..86889882,+ | |||
|coexpression_cluster_id=C2603 | |||
|description=CAGE_peak_1_at_CLCA2_5end | |||
|id=chr1:86889837..86889882,+ | |||
|ontology_enrichment_celltype=CL:0002076!7.33e-16!43;CL:0000066!1.56e-13!254;CL:0000223!4.59e-11!59;CL:0002159!1.43e-10!13;CL:0002251!2.27e-10!21;CL:0002077!3.09e-10!33;CL:0002368!1.07e-09!13;CL:0000076!3.58e-08!62;CL:0000622!4.36e-08!5;CL:0000197!3.25e-07!6;CL:0000098!3.25e-07!6;CL:0002167!3.25e-07!6;CL:0002327!9.95e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.91e-20;42!CL:0002159;1.93e-16;14!CL:0002368;2.33e-16;13!CL:0002251;9.10e-15;20!CL:0000622;1.07e-12;5!CL:0000154;1.70e-10;6!CL:0002327;2.08e-10;4!CL:0000244;2.59e-09;4!CL:0000731;2.59e-09;4!CL:0000150;3.19e-09;9!CL:0002077;3.55e-09;34!CL:0002166;7.85e-09;3!CL:0002621;8.89e-09;3!CL:0002202;9.25e-09;9!CL:0002632;9.25e-09;9!CL:0002623;4.67e-08;3!CL:0000307;1.06e-07;3!CL:0002328;1.67e-07;3!CL:0000240;4.66e-07;6!CL:0000311;4.66e-07;6!CL:0000079;4.66e-07;6!CL:0000237;4.66e-07;6!CL:0000362;5.86e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.79e-26,42;CL:0000223,7.24e-19,58;CL:0002159,1.94e-16,14;CL:0002368,2.36e-16,13;CL:0000066,3.25e-16,253;CL:0002251,8.31e-15,20;CL:0000622,1.03e-12,5;CL:0002077,1.00e-10,34;CL:0000154,1.65e-10,6;CL:0002327,2.11e-10,4;CL:0000244,2.65e-09,4;CL:0000731,2.65e-09,4;CL:0000150,3.34e-09,9;CL:0002166,7.85e-09,3;CL:0002621,8.89e-09,3;CL:0002202,9.39e-09,9;CL:0002632,9.39e-09,9;CL:0000076,2.32e-08,63;CL:0002623,4.51e-08,3;CL:0000068,1.09e-07,3;CL:0000069,1.09e-07,3;CL:0000307,1.09e-07,3;CL:0000377,1.09e-07,3;CL:0002328,1.65e-07,3;CL:0000240,4.67e-07,6;CL:0000311,4.67e-07,6;CL:0000079,4.67e-07,6;CL:0000237,4.67e-07,6;CL:0000036,4.67e-07,6;CL:0000357,4.67e-07,6;CL:0000114,4.67e-07,6;CL:0000362,5.86e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;4.93e-11;58!CL:0000377;1.06e-07;3!CL:0000357;4.66e-07;6!CL:0000114;4.66e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!9.88e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.64e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.62e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.45e-19!72;UBERON:0000161!1.65e-16!35;UBERON:0000166!7.13e-16!21;UBERON:0000165!3.65e-12!28;UBERON:0000930!3.65e-12!28;UBERON:0003102!5.06e-12!95;UBERON:0004119!8.12e-12!169;UBERON:0000925!8.12e-12!169;UBERON:0006595!8.12e-12!169;UBERON:0000065!1.37e-10!53;UBERON:0001007!3.39e-08!155;UBERON:0001555!3.39e-08!155;UBERON:0007026!3.39e-08!155;UBERON:0005181!1.28e-07!35;UBERON:0001444!3.43e-07!48;UBERON:0003729!4.07e-07!5;UBERON:0000365!4.63e-07!5;UBERON:0005178!5.17e-07!34;UBERON:0002224!5.17e-07!34;UBERON:0005153!5.53e-07!37;UBERON:0000915!5.64e-07!52;UBERON:0001911!9.95e-07!4;UBERON:0005333!9.95e-07!4;UBERON:0008425!9.95e-07!4;UBERON:0005311!9.95e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;5.14e-18;19!UBERON:0000166;5.14e-18;19!UBERON:0000165;8.38e-18;28!UBERON:0003729;3.76e-16;13!UBERON:0000344;4.58e-14;20!UBERON:0000486;1.98e-11;12!UBERON:0000365;6.47e-11;5!UBERON:0001911;2.08e-10;4!UBERON:0001828;5.22e-10;8!UBERON:0005910;4.93e-09;6!UBERON:0001949;8.89e-09;3!UBERON:0007196;1.28e-08;15!UBERON:0001558;1.28e-08;15!UBERON:0001004;1.82e-08;65!UBERON:0003126;3.27e-08;7!UBERON:0001005;3.27e-08;7!UBERON:0005178;9.50e-08;34!UBERON:0002224;9.50e-08;34!UBERON:0007811;1.07e-07;52!UBERON:0001723;1.18e-07;3!UBERON:0001033;1.18e-07;3!UBERON:0004815;1.67e-07;3!UBERON:0002031;1.67e-07;3!UBERON:0000033;2.42e-07;50!UBERON:0001444;2.69e-07;48!UBERON:0005181;3.72e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,1.24e-20,22;UBERON:0000161,1.29e-20,36;UBERON:0001004,5.83e-20,74;UBERON:0003102,8.84e-20,99;UBERON:0000165,4.86e-17,29;UBERON:0000930,4.86e-17,29;UBERON:0003729,3.85e-16,13;UBERON:0004119,1.15e-15,160;UBERON:0000925,1.15e-15,160;UBERON:0006595,1.15e-15,160;UBERON:0000344,4.27e-14,20;UBERON:0000033,2.57e-13,56;UBERON:0000153,7.59e-13,62;UBERON:0007811,7.59e-13,62;UBERON:0001444,5.64e-11,49;UBERON:0000365,5.74e-11,5;UBERON:0000065,1.78e-10,54;UBERON:0001911,2.11e-10,4;UBERON:0005333,2.11e-10,4;UBERON:0008425,2.11e-10,4;UBERON:0005311,2.11e-10,4;UBERON:0001828,5.62e-10,8;UBERON:0001007,8.99e-10,145;UBERON:0001555,8.99e-10,145;UBERON:0007026,8.99e-10,145;UBERON:0005910,4.47e-09,6;UBERON:0001949,8.89e-09,3;UBERON:0007196,1.31e-08,15;UBERON:0001558,1.31e-08,15;UBERON:0005178,2.74e-08,34;UBERON:0002224,2.74e-08,34;UBERON:0003126,3.37e-08,7;UBERON:0001005,3.37e-08,7;UBERON:0005181,5.74e-08,35;UBERON:0001723,1.09e-07,3;UBERON:0001033,1.09e-07,3;UBERON:0010056,1.09e-07,3;UBERON:0005153,1.35e-07,37;UBERON:0004815,1.65e-07,3;UBERON:0002031,1.65e-07,3;UBERON:0005157,1.92e-07,47 | |||
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| ||
|short_description=p1@CLCA2 | |||
}} | }} |
Latest revision as of 14:20, 19 September 2015
Short description: | p1@CLCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLCA2_5end |
Coexpression cluster: | C2603_breast_Mallassezderived_Gingival_Sebocyte_Keratinocyte_keratoacanthoma_Prostate |
Association with transcript: | 68bp_to_ENST00000370565, ENST00000439777, NM_006536, uc001dlr.3_5end |
EntrezGene: | CLCA2 |
HGNC: | 2016 |
UniProt: | Q9UQC9E7EUD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.62e-11 | 14 |