FFCP PHASE1:Hg19::chr3:124606323..124606344,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:124606323..124606344,- to FFCP PHASE1:Hg19::chr3:124606323..124606344,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3693 | |EntrezGene=3693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6160 | |HGNC=6160 | ||
|TSSclassifier=strong | |||
|UniProt=P18084 | |UniProt=P18084 | ||
|association_with_transcript=-179bp_to_ENST00000296181,NM_002213,uc003eho.2_5end | |||
|cluster_id=chr3:124606323..124606344,- | |||
|description=CAGE_peak_3_at_ITGB5_5end | |||
|id=chr3:124606323..124606344,- | |||
|ontology_enrichment_celltype=CL:0002321!1.35e-13!248;CL:0000220!1.59e-13!246;CL:0000066!2.08e-13!254;CL:0000055!1.52e-12!180;CL:0000222!4.90e-11!119;CL:0000192!2.25e-08!42;CL:0000514!2.25e-08!42;CL:0000359!6.02e-08!32;CL:0000183!3.50e-07!59;CL:0000680!5.56e-07!57;CL:0000056!5.56e-07!57;CL:0000355!5.56e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.54e-07;32!CL:0002681;3.68e-07;12!CL:0002584;3.68e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.65e-12,250;CL:0000222,2.16e-10,121;CL:0000066,4.55e-10,253;CL:0000192,5.55e-08,43;CL:0000514,5.55e-08,43;CL:0000359,7.65e-08,32;CL:0002681,3.20e-07,12;CL:0002584,3.20e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.13e-20!659;UBERON:0002100!2.34e-18!216;UBERON:0000467!1.17e-17!625;UBERON:0000480!1.53e-17!626;UBERON:0003914!4.89e-15!118;UBERON:0005256!5.67e-14!143;UBERON:0000475!9.34e-14!365;UBERON:0003104!1.82e-13!238;UBERON:0009142!1.82e-13!238;UBERON:0000119!5.55e-13!312;UBERON:0000483!1.05e-12!309;UBERON:0004872!1.04e-11!84;UBERON:0000926!1.34e-11!448;UBERON:0004120!1.34e-11!448;UBERON:0006603!1.34e-11!448;UBERON:0000922!1.79e-11!612;UBERON:0000923!5.41e-11!604;UBERON:0005291!5.41e-11!604;UBERON:0006598!5.41e-11!604;UBERON:0002532!5.41e-11!604;UBERON:0002050!5.75e-11!605;UBERON:0005423!5.75e-11!605;UBERON:0000481!9.99e-11!347;UBERON:0003886!2.82e-10!63;UBERON:0000466!2.95e-10!126;UBERON:0000055!1.56e-09!69;UBERON:0001981!3.81e-09!60;UBERON:0007500!3.81e-09!60;UBERON:0004537!3.81e-09!60;UBERON:0006965!3.81e-09!60;UBERON:0000464!3.99e-09!104;UBERON:0009569!5.24e-09!113;UBERON:0004111!5.47e-09!241;UBERON:0002049!5.64e-09!79;UBERON:0007798!5.64e-09!79;UBERON:0002553!5.69e-09!70;UBERON:0000062!5.76e-09!511;UBERON:0000477!6.11e-09!286;UBERON:0001048!7.12e-09!168;UBERON:0001637!2.33e-08!42;UBERON:0003509!2.33e-08!42;UBERON:0004572!2.33e-08!42;UBERON:0000486!2.34e-08!82;UBERON:0000490!2.67e-08!138;UBERON:0004923!7.32e-08!57;UBERON:0000025!8.88e-08!194;UBERON:0000914!1.53e-07!83;UBERON:0002329!1.53e-07!83;UBERON:0003077!1.53e-07!83;UBERON:0003059!1.53e-07!83;UBERON:0007282!1.53e-07!83;UBERON:0009618!1.53e-07!83;UBERON:0007285!1.53e-07!83;UBERON:0004290!2.53e-07!70;UBERON:0004119!3.13e-07!169;UBERON:0000925!3.13e-07!169;UBERON:0006595!3.13e-07!169;UBERON:0000064!7.76e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001225;3.68e-07;12!UBERON:0008987;3.68e-07;12!UBERON:0000353;8.65e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,9.55e-16,199;UBERON:0003914,7.66e-15,117;UBERON:0005256,1.69e-11,122;UBERON:0004872,5.93e-11,83;UBERON:0003104,3.51e-10,160;UBERON:0009142,3.51e-10,160;UBERON:0007503,1.18e-09,78;UBERON:0000119,1.58e-09,309;UBERON:0000483,2.77e-09,306;UBERON:0000055,8.42e-09,68;UBERON:0000490,1.07e-08,148;UBERON:0003886,1.17e-08,54;UBERON:0007500,1.37e-08,59;UBERON:0001981,1.37e-08,59;UBERON:0004537,1.37e-08,59;UBERON:0006965,1.37e-08,59;UBERON:0001637,4.59e-08,42;UBERON:0003509,4.59e-08,42;UBERON:0004572,4.59e-08,42;UBERON:0002049,5.51e-08,78;UBERON:0007798,5.51e-08,78;UBERON:0000486,1.00e-07,83;UBERON:0004923,1.06e-07,66;UBERON:0009569,1.18e-07,112;UBERON:0000922,2.62e-07,592;UBERON:0002553,2.79e-07,61;UBERON:0001225,3.20e-07,12;UBERON:0008987,3.20e-07,12;UBERON:0007524,5.12e-07,73;UBERON:0002329,5.89e-07,71;UBERON:0003059,5.89e-07,71;UBERON:0007282,5.89e-07,71;UBERON:0004290,5.89e-07,71;UBERON:0009618,5.89e-07,71;UBERON:0003077,7.52e-07,72;UBERON:0007285,7.52e-07,72;UBERON:0000353,7.72e-07,15;UBERON:0004111,9.87e-07,240 | |||
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| ||
|short_description=p3@ITGB5 | |||
}} | }} |
Latest revision as of 02:43, 20 September 2015
Short description: | p3@ITGB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ITGB5_5end |
Coexpression cluster: | NA |
Association with transcript: | -179bp_to_ENST00000296181, NM_002213, uc003eho.2_5end |
EntrezGene: | ITGB5 |
HGNC: | 6160 |
UniProt: | P18084 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.65e-12 | 250 |
mesodermal cell | 2.16e-10 | 121 |
epithelial cell | 4.55e-10 | 253 |
smooth muscle cell | 5.55e-08 | 43 |
smooth muscle myoblast | 5.55e-08 | 43 |
vascular associated smooth muscle cell | 7.65e-08 | 32 |
kidney cortical cell | 3.20e-07 | 12 |
renal cortical epithelial cell | 3.20e-07 | 12 |