FFCP PHASE1:Hg19::chr3:129158715..129158766,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:129158715..129158766,- to FFCP PHASE1:Hg19::chr3:129158715..129158766,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8930 | |EntrezGene=8930 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6919 | |HGNC=6919 | ||
|TSSclassifier=strong | |||
|UniProt=D6RBI7 | |UniProt=D6RBI7 | ||
|association_with_transcript=3bp_to_ENST00000509828_5end | |||
|cluster_id=chr3:129158715..129158766,- | |||
|coexpression_cluster_id=C246 | |||
|description=CAGE_peak_2_at_MBD4_5end | |||
|id=chr3:129158715..129158766,- | |||
|ontology_enrichment_celltype=CL:0000037!3.21e-52!172;CL:0000566!3.21e-52!172;CL:0000738!5.32e-51!140;CL:0002032!4.54e-49!165;CL:0000837!4.54e-49!165;CL:0000988!8.45e-47!182;CL:0002087!3.48e-42!119;CL:0002031!3.73e-42!124;CL:0000763!6.74e-35!112;CL:0000049!6.74e-35!112;CL:0000766!1.48e-33!76;CL:0000557!1.56e-30!71;CL:0002009!1.48e-29!65;CL:0000839!1.72e-29!70;CL:0002194!8.91e-29!63;CL:0000576!8.91e-29!63;CL:0000040!8.91e-29!63;CL:0000559!8.91e-29!63;CL:0000134!2.46e-26!358;CL:0002320!1.28e-24!365;CL:0002057!2.88e-22!42;CL:0000860!3.81e-22!45;CL:0000219!6.15e-22!390;CL:0000048!3.01e-18!430;CL:0000034!7.07e-18!444;CL:0000723!9.81e-18!436;CL:0000542!2.66e-12!53;CL:0000051!2.66e-12!53;CL:0000838!6.44e-12!52;CL:0000236!1.33e-07!14;CL:0000063!1.46e-07!578;CL:0000945!4.90e-07!24;CL:0000826!4.90e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.39e-19;33!CL:0002057;5.39e-19;33!CL:0000473;1.29e-18;39!CL:0000234;1.29e-18;39!CL:0000576;3.43e-16;48!CL:0000766;7.71e-14;69!CL:0002087;1.31e-11;104!CL:0000738;1.91e-11;136!CL:0000763;1.22e-09;100!CL:0000988;1.06e-08;177!CL:0000542;4.11e-08;53!CL:0000236;1.35e-07;13!CL:0000945;3.39e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.57e-52,168;CL:0000738,1.11e-50,136;CL:0002032,1.31e-48,161;CL:0000837,1.31e-48,161;CL:0000988,2.79e-47,177;CL:0002087,6.49e-42,115;CL:0002031,7.50e-42,120;CL:0000763,1.37e-34,108;CL:0000049,1.37e-34,108;CL:0000766,1.52e-33,72;CL:0000557,1.64e-30,67;CL:0002009,1.35e-29,61;CL:0000839,1.86e-29,66;CL:0002194,7.92e-29,59;CL:0000576,7.92e-29,59;CL:0000040,7.92e-29,59;CL:0000559,7.92e-29,59;CL:0000134,2.36e-26,354;CL:0000473,1.81e-25,48;CL:0000234,1.81e-25,48;CL:0002320,1.27e-24,361;CL:0000860,2.87e-22,42;CL:0002057,2.87e-22,42;CL:0000219,6.44e-22,386;CL:0000048,2.04e-18,427;CL:0000034,4.88e-18,441;CL:0000723,6.72e-18,433;CL:0000542,2.66e-12,53;CL:0000051,2.66e-12,53;CL:0000838,6.44e-12,52;CL:0000236,1.33e-07,14;CL:0000945,4.90e-07,24;CL:0000826,4.90e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.98e-16;42!CL:0000049;4.95e-10;108!CL:0000051;4.11e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.23e-33!102;UBERON:0003061!7.23e-33!102;UBERON:0002193!8.82e-29!112;UBERON:0002371!1.82e-26!80;UBERON:0002384!6.99e-25!375;UBERON:0001474!8.88e-22!86;UBERON:0002405!2.33e-19!115;UBERON:0004765!2.10e-17!101;UBERON:0001434!2.10e-17!101;UBERON:0000178!7.01e-08!15;UBERON:0000179!7.01e-08!15;UBERON:0000463!7.01e-08!15;UBERON:0002204!7.23e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.47e-08;15!UBERON:0000179;6.47e-08;15!UBERON:0000463;6.47e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.35e-32,98;UBERON:0003061,1.35e-32,98;UBERON:0002193,2.06e-28,108;UBERON:0002371,2.94e-26,76;UBERON:0002384,7.08e-25,371;UBERON:0002405,8.62e-22,93;UBERON:0001474,1.87e-21,82;UBERON:0004765,3.61e-19,90;UBERON:0001434,2.88e-16,100;UBERON:0000178,7.01e-08,15;UBERON:0000179,7.01e-08,15;UBERON:0000463,7.01e-08,15;UBERON:0002204,2.21e-07,167 | |||
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| ||
|short_description=p2@MBD4 | |||
}} | }} |
Latest revision as of 17:09, 24 September 2015
Short description: | p2@MBD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MBD4_5end |
Coexpression cluster: | C246_Neutrophils_Eosinophils_Whole_CD14_CD14CD16_Basophils_migratory |
Association with transcript: | 3bp_to_ENST00000509828_5end |
EntrezGene: | MBD4 |
HGNC: | 6919 |
UniProt: | D6RBI7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.35e-32 | 98 |
blood island | 1.35e-32 | 98 |
hemolymphoid system | 2.06e-28 | 108 |
bone marrow | 2.94e-26 | 76 |
connective tissue | 7.08e-25 | 371 |
immune system | 8.62e-22 | 93 |
bone element | 1.87e-21 | 82 |
skeletal element | 3.61e-19 | 90 |
skeletal system | 2.88e-16 | 100 |
blood | 7.01e-08 | 15 |
haemolymphatic fluid | 7.01e-08 | 15 |
organism substance | 7.01e-08 | 15 |
musculoskeletal system | 2.21e-07 | 167 |