FFCP PHASE1:Hg19::chr3:134093275..134093299,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:134093275..134093299,- to FFCP PHASE1:Hg19::chr3:134093275..134093299,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51421 | |EntrezGene=51421 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17812 | |HGNC=17812 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2J4 | |UniProt=Q9Y2J4 | ||
|association_with_transcript=0bp_to_ENST00000422605,ENST00000513145_5end | |||
|cluster_id=chr3:134093275..134093299,- | |||
|description=CAGE_peak_1_at_AMOTL2_5end | |||
|id=chr3:134093275..134093299,- | |||
|ontology_enrichment_celltype=CL:0000055!6.09e-22!180;CL:0000220!1.51e-17!246;CL:0002321!2.46e-17!248;CL:0000066!2.78e-16!254;CL:0000222!4.94e-14!119;CL:0000057!8.18e-14!75;CL:0000548!2.20e-09!679;CL:0000004!2.20e-09!679;CL:0000255!2.20e-09!679;CL:0000012!1.06e-08!682;CL:0000183!3.05e-08!59;CL:0000187!1.26e-07!54;CL:0000680!1.45e-07!57;CL:0000056!1.45e-07!57;CL:0000355!1.45e-07!57;CL:0002620!1.53e-07!23;CL:0000077!2.32e-07!19;CL:0000076!4.38e-07!62;CL:0000393!5.00e-07!60;CL:0000211!5.00e-07!60;CL:0000136!6.99e-07!15;CL:0000192!9.30e-07!42;CL:0000514!9.30e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.50e-07;23!CL:0000077;2.28e-07;19!CL:0000349;3.03e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.54e-17,250;CL:0000066,4.30e-16,253;CL:0000222,3.91e-14,121;CL:0000057,5.85e-14,76;CL:0000187,1.01e-07,55;CL:0000680,1.16e-07,58;CL:0000056,1.16e-07,58;CL:0000355,1.16e-07,58;CL:0002620,1.45e-07,23;CL:0000077,2.20e-07,19;CL:0000076,2.46e-07,63;CL:0000349,3.04e-07,19;CL:0000393,4.00e-07,61;CL:0000211,4.00e-07,61;CL:0000136,6.67e-07,15;CL:0000192,7.59e-07,43;CL:0000514,7.59e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!2.93e-18!216;UBERON:0000475!4.26e-17!365;UBERON:0003104!6.73e-14!238;UBERON:0009142!6.73e-14!238;UBERON:0005256!6.77e-14!143;UBERON:0000481!1.27e-11!347;UBERON:0004923!1.28e-10!57;UBERON:0000119!6.31e-10!312;UBERON:0000468!6.47e-10!659;UBERON:0003914!1.30e-09!118;UBERON:0000490!1.37e-09!138;UBERON:0000483!2.19e-09!309;UBERON:0000486!6.11e-09!82;UBERON:0000914!1.40e-08!83;UBERON:0002329!1.40e-08!83;UBERON:0003077!1.40e-08!83;UBERON:0003059!1.40e-08!83;UBERON:0007282!1.40e-08!83;UBERON:0009618!1.40e-08!83;UBERON:0007285!1.40e-08!83;UBERON:0009569!2.84e-08!113;UBERON:0004290!4.83e-08!70;UBERON:0003102!6.66e-08!95;UBERON:0003886!1.82e-07!63;UBERON:0001134!2.33e-07!61;UBERON:0002036!2.33e-07!61;UBERON:0003082!2.33e-07!61;UBERON:0002385!3.35e-07!63;UBERON:0001015!3.35e-07!63;UBERON:0000383!3.35e-07!63;UBERON:0002097!3.81e-07!40;UBERON:0000466!4.69e-07!126;UBERON:0000467!6.05e-07!625;UBERON:0002199!6.23e-07!45;UBERON:0002416!6.23e-07!45;UBERON:0000480!8.33e-07!626;UBERON:0002049!8.47e-07!79;UBERON:0007798!8.47e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.64e-17,199;UBERON:0003104,3.82e-15,160;UBERON:0009142,3.82e-15,160;UBERON:0005256,2.35e-11,122;UBERON:0000490,2.01e-10,148;UBERON:0000119,6.02e-10,309;UBERON:0007503,8.60e-10,78;UBERON:0004923,1.24e-09,66;UBERON:0003914,1.44e-09,117;UBERON:0000483,2.10e-09,306;UBERON:0000486,4.76e-09,83;UBERON:0007524,3.20e-08,73;UBERON:0002329,3.81e-08,71;UBERON:0003059,3.81e-08,71;UBERON:0007282,3.81e-08,71;UBERON:0004290,3.81e-08,71;UBERON:0009618,3.81e-08,71;UBERON:0003102,6.22e-08,99;UBERON:0009569,6.46e-08,112;UBERON:0003077,7.12e-08,72;UBERON:0007285,7.12e-08,72;UBERON:0001134,1.85e-07,62;UBERON:0002036,1.85e-07,62;UBERON:0003082,1.85e-07,62;UBERON:0002097,2.03e-07,41;UBERON:0002385,2.67e-07,64;UBERON:0001015,2.67e-07,64;UBERON:0000383,2.67e-07,64;UBERON:0002199,3.39e-07,46;UBERON:0002416,3.39e-07,46;UBERON:0001008,8.77e-07,48 | |||
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| ||
|short_description=p1@AMOTL2 | |||
}} | }} |
Latest revision as of 22:32, 24 September 2015
Short description: | p1@AMOTL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AMOTL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000422605, ENST00000513145_5end |
EntrezGene: | AMOTL2 |
HGNC: | 17812 |
UniProt: | Q9Y2J4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.54e-17 | 250 |
epithelial cell | 4.30e-16 | 253 |
mesodermal cell | 3.91e-14 | 121 |
fibroblast | 5.85e-14 | 76 |
muscle cell | 1.01e-07 | 55 |
muscle precursor cell | 1.16e-07 | 58 |
myoblast | 1.16e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.16e-07 | 58 |
skin fibroblast | 1.45e-07 | 23 |
mesothelial cell | 2.20e-07 | 19 |
squamous epithelial cell | 2.46e-07 | 63 |
extraembryonic cell | 3.04e-07 | 19 |
electrically responsive cell | 4.00e-07 | 61 |
electrically active cell | 4.00e-07 | 61 |
fat cell | 6.67e-07 | 15 |
smooth muscle cell | 7.59e-07 | 43 |
smooth muscle myoblast | 7.59e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.64e-17 | 199 |
mesenchyme | 3.82e-15 | 160 |
entire embryonic mesenchyme | 3.82e-15 | 160 |
trunk mesenchyme | 2.35e-11 | 122 |
unilaminar epithelium | 2.01e-10 | 148 |
cell layer | 6.02e-10 | 309 |
epithelial vesicle | 8.60e-10 | 78 |
organ component layer | 1.24e-09 | 66 |
epithelial tube | 1.44e-09 | 117 |
epithelium | 2.10e-09 | 306 |
multilaminar epithelium | 4.76e-09 | 83 |
dense mesenchyme tissue | 3.20e-08 | 73 |
somite | 3.81e-08 | 71 |
presomitic mesoderm | 3.81e-08 | 71 |
presumptive segmental plate | 3.81e-08 | 71 |
dermomyotome | 3.81e-08 | 71 |
trunk paraxial mesoderm | 3.81e-08 | 71 |
surface structure | 6.22e-08 | 99 |
subdivision of trunk | 6.46e-08 | 112 |
paraxial mesoderm | 7.12e-08 | 72 |
presumptive paraxial mesoderm | 7.12e-08 | 72 |
skeletal muscle tissue | 1.85e-07 | 62 |
striated muscle tissue | 1.85e-07 | 62 |
myotome | 1.85e-07 | 62 |
skin of body | 2.03e-07 | 41 |
muscle tissue | 2.67e-07 | 64 |
musculature | 2.67e-07 | 64 |
musculature of body | 2.67e-07 | 64 |
integument | 3.39e-07 | 46 |
integumental system | 3.39e-07 | 46 |
renal system | 8.77e-07 | 48 |