FFCP PHASE1:Hg19::chr3:33757334..33757340,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:33757334..33757340,- to FFCP PHASE1:Hg19::chr3:33757334..33757340,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:33757334..33757340,- | |||
|coexpression_cluster_id=C492 | |||
|description=CAGE_peak_at_chr3:33757334..33757340,- | |||
|id=chr3:33757334..33757340,- | |||
|ontology_enrichment_celltype=CL:0000037!6.64e-33!172;CL:0000566!6.64e-33!172;CL:0000988!3.49e-31!182;CL:0002032!2.16e-30!165;CL:0000837!2.16e-30!165;CL:0000738!4.06e-30!140;CL:0002087!9.75e-29!119;CL:0002031!4.06e-27!124;CL:0000860!2.70e-21!45;CL:0002057!2.77e-20!42;CL:0000763!1.35e-19!112;CL:0000049!1.35e-19!112;CL:0002009!6.60e-18!65;CL:0002194!3.85e-17!63;CL:0000576!3.85e-17!63;CL:0000040!3.85e-17!63;CL:0000559!3.85e-17!63;CL:0000766!6.90e-17!76;CL:0000557!1.00e-16!71;CL:0000839!1.50e-16!70;CL:0000542!4.56e-10!53;CL:0000051!4.56e-10!53;CL:0000838!6.10e-10!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.22e-15;33!CL:0002057;2.22e-15;33!CL:0000576;8.08e-13;48!CL:0000473;2.13e-10;39!CL:0000234;2.13e-10;39!CL:0002087;2.73e-10;104!CL:0000766;8.78e-09;69!CL:0000623;1.20e-08;3!CL:0000226;3.02e-08;3!CL:0000842;3.02e-08;3!CL:0000542;1.48e-07;53!CL:0000084;1.78e-07;25!CL:0000236;1.93e-07;13!CL:0000791;2.18e-07;18!CL:0000789;2.18e-07;18!CL:0002419;2.18e-07;18!CL:0000988;4.38e-07;177!CL:0002393;6.82e-07;6!CL:0002397;6.82e-07;6!CL:0000738;8.59e-07;136!CL:0000624;9.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.34e-31,136;CL:0002087,2.99e-31,115;CL:0000037,3.17e-29,168;CL:0000988,3.56e-28,177;CL:0002031,3.85e-26,120;CL:0002032,3.07e-24,161;CL:0000837,3.07e-24,161;CL:0000860,3.30e-22,42;CL:0002057,3.30e-22,42;CL:0000473,1.31e-18,48;CL:0000234,1.31e-18,48;CL:0002009,5.35e-16,61;CL:0002194,3.62e-15,59;CL:0000576,3.62e-15,59;CL:0000040,3.62e-15,59;CL:0000559,3.62e-15,59;CL:0000557,5.58e-14,67;CL:0000766,9.66e-14,72;CL:0000839,6.68e-13,66;CL:0000838,1.32e-12,52;CL:0000763,2.53e-12,108;CL:0000049,2.53e-12,108;CL:0000542,2.88e-12,53;CL:0000051,2.88e-12,53;CL:0000623,1.28e-08,3;CL:0000825,1.28e-08,3;CL:0000134,2.45e-08,354;CL:0000226,3.03e-08,3;CL:0000842,3.03e-08,3;CL:0002320,6.65e-08,361;CL:0000219,2.25e-07,386;CL:0000791,2.31e-07,18;CL:0000789,2.31e-07,18;CL:0002420,2.31e-07,18;CL:0002419,2.31e-07,18;CL:0000790,2.31e-07,18;CL:0000084,2.79e-07,25;CL:0000827,2.79e-07,25;CL:0000236,5.79e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-16;42!CL:0000051;1.48e-07;53!CL:0000790;2.18e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.20e-16!102;UBERON:0003061!9.20e-16!102;UBERON:0002193!1.82e-14!112;UBERON:0002371!6.83e-13!80;UBERON:0001474!1.28e-12!86;UBERON:0004765!1.08e-08!101;UBERON:0001434!1.08e-08!101;UBERON:0002405!1.92e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.80e-13,98;UBERON:0003061,1.80e-13,98;UBERON:0002371,1.45e-11,76;UBERON:0002193,1.75e-11,108;UBERON:0001474,2.92e-10,82;UBERON:0004765,8.31e-09,90;UBERON:0002405,2.49e-08,93;UBERON:0001434,2.44e-07,100;UBERON:0002384,2.56e-07,371 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0.286235987131057,0.410623275218653,0.376627918784408,0.993374274723366,0.821005894499457,0.314843125254717,0.786728553697808,2.68680578668049,1.08371286321253,0,0,0,0.852139206383318,0.995184627411951,0.293600439334847,4.9859586767869,8.42286679374595,7.16135873362311,0.447830948479849,0.32389366601898,0,1.59938062657521,0.755751887377619,0.727752183563449,0.697287110717054,3.28934310417461,0.619412741790207,0.28769239232215,1.0246428261164,0.236482229888585,2.06847408441971,0.645484683583826,1.35426486594342,2.82363509313907,2.72906150057846,0.898893937780338,0.612167784741805,0.962787081228281,0.639337125799041,0.329851300186716,0.997318288108159,0.426224750532694,2.32167390902867,1.70215567407342,1.24564449799115,1.00499466102697,2.08593167368081,1.3031330682307,3.02699751316684,1.47311054395026,1.26584954976354,1.05627643155971,0.637812899895131,0.838634582033504,0.786300418025466,1.20141514273205,1.12507910687956,1.71007646244749,0.99458338599545,0.547992461293902,0,1.09227722252426,1.77901850772711,1.28019066769952,0,0,1.32208974556972,0.954053754535364,4.55370375287559,2.34894875748376,1.91136614062614,0,1.68152568894461,0.526768169550154,3.93419540227666,5.10913991573914,3.08402248499264,0,0.651844533267181,2.36723902867367,0,0.222820913770347,1.17842362989935,1.10766947291811,1.35401931882508,0.640456598628376,0.520237390239513,1.15106533222573,1.10540007114339,0,1.33457906845854,1.87278579662799,2.09071047609954,0.566546713487831,0,0.68725489096526,1.26509846009751,0,0.651083453856419,0,0,0.127986611154418,1.24930726552346,0.236777252044017,0.821127996921047,2.82249440514625,5.88368430723716,7.38604459802275,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0,0.175669571386252,0.72038491523742,0.364295288292542,0,0.97364218096405,0.870648686496336,0.26591592103773,2.8618874916641,1.71598473234038,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0.66944122552934,0,0,0,0,0,1.16089646769304,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0,0.354668382198357,0,0,0,0.622422070799533,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0.61246251376468,0.245668634623536,0.206651562351531,0,0.494533858557114,0,0,0,0.625592599359821,0,0,0,0,0.113432183160021,0.179389635688862,0.427114777637135,0,0,0.206105058476878,0,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0.201504196455281,0,0.193260853163297,0.818238361772504,0,0.121973706129595,0.132529768321485,0,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0.330881918197182,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,1.32438929824395,0.614942192715568,0,0,0,0.201057944823262,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0.984868024349589,0.468008530278475,0.594524649154913,0,0,0,0.179117045405697,0,0,0.492663237895943,0.176096868026452,0,0.144119953416961,0.6312121671319,0.063497894292169,0.763976851116555,0,0,0,0,0,0.224262168690721,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0.716243852959582,0.448340575974109,4.13764596424047,6.253199670926,7.05886699538616,0.254094624222463,0,0,0.167516265334349,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,2.48121631347465,6.47142602455851,2.34800627167578,0,0,0,0.248107807818777,0.306923946576125,0,0.256278298511402,0,0,0,0.154209693802656,0,0.164254312027618,0.519254429183621,0,0.725156697549733,0.601519410909855,0.276242966807689,0.114814448164607,0.364182336013434,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0.509752546090077,0.831076008928724,0.223874754722178,0.219259876645935,0.261435451024901,0,0,0,0.824328093181778,0.457847324091717,0.247528499761764,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0,1.07420244868274,0.145016693914229,0.426133137080504,0.0890320356467374,0.165284915360978,0.384380134730212,1.14851441245126,0,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0.288666338176536,0,0,0.847294206991012,0.43050537267123,0,0,0,0,0,1.13929437434833,0.476463550915578,0.411362273086194,0,0,0.79312517629427,0.427296284509893,0.962479855263359,0,0.371606350251437,0.28853842595289,0.355709216742071,0.159426272728822,1.99579371432817,0.383010740264733,0.846694330895531,0.649243880549111,0.842391534340376,0.456469358066384,0.626719583092093,0,0.169291777801603,1.92705690124439,4.03599414382095,0.851692475380653,0,0.307240764308458,0,0.333698283423817,0.390776190804081,0.278406173895242,1.23087398947712,0,0.66614393599564,0,0,0.293016358543788,0,1.00299045849731,0.568272293612826,0,0,0,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| ||
|short_description=p@chr3:33757334..33757340,- | |||
}} | }} |
Latest revision as of 20:33, 29 July 2015
Short description: | p@chr3:33757334..33757340, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:33757334..33757340, - |
Coexpression cluster: | C492_CD14_CD4_Neutrophils_CD8_Natural_CD19_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.80e-13 | 98 |
blood island | 1.80e-13 | 98 |
bone marrow | 1.45e-11 | 76 |
hemolymphoid system | 1.75e-11 | 108 |
bone element | 2.92e-10 | 82 |
skeletal element | 8.31e-09 | 90 |
immune system | 2.49e-08 | 93 |
skeletal system | 2.44e-07 | 100 |
connective tissue | 2.56e-07 | 371 |