FFCP PHASE1:Hg19::chr3:47476613..47476628,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:47476613..47476628,- to FFCP PHASE1:Hg19::chr3:47476613..47476628,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:47476613..47476628,- | |||
|description=CAGE_peak_at_chr3:47476613..47476628,- | |||
|id=chr3:47476613..47476628,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002188;8.97e-21;5!CL:1000746;3.79e-15;7!CL:1000612;3.79e-15;7!CL:0002567;1.35e-09;3!CL:0002681;3.01e-09;12!CL:0002584;3.01e-09;12!CL:1000449;1.40e-07;15!CL:0000306;1.64e-07;4!CL:0002222;1.64e-07;4!CL:0002224;1.64e-07;4!CL:1000497;8.59e-07;17!CL:0002518;8.59e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,7.35e-21,5;CL:1000746,3.29e-15,7;CL:1000612,3.29e-15,7;CL:0002567,1.81e-09,3;CL:0002681,2.77e-09,12;CL:0002584,2.77e-09,12;CL:1000449,1.31e-07,15;CL:0000306,1.92e-07,4;CL:0002222,1.92e-07,4;CL:0002224,1.92e-07,4;CL:1000497,8.11e-07,17;CL:0002518,8.11e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;3.79e-15;7!UBERON:0001229;3.79e-15;7!UBERON:0001225;3.01e-09;12!UBERON:0008987;3.01e-09;12!UBERON:0001851;1.40e-07;15!UBERON:0006555;1.40e-07;15!UBERON:0000353;1.40e-07;15!UBERON:0004819;1.40e-07;15!UBERON:0001285;1.40e-07;15!UBERON:0007684;1.40e-07;15!UBERON:0010077;1.64e-07;4!UBERON:0005389;1.64e-07;4!UBERON:0000484;1.64e-07;4!UBERON:0000965;1.64e-07;4!UBERON:0001803;1.64e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,3.29e-15,7;UBERON:0000074,3.29e-15,7;UBERON:0001229,3.29e-15,7;UBERON:0001230,3.29e-15,7;UBERON:0003220,3.29e-15,7;UBERON:0005749,3.29e-15,7;UBERON:0004199,3.29e-15,7;UBERON:0004209,3.29e-15,7;UBERON:0004198,3.29e-15,7;UBERON:0005103,1.94e-13,8;UBERON:0000083,1.94e-13,8;UBERON:0009201,1.94e-13,8;UBERON:0006553,1.94e-13,8;UBERON:0003074,1.94e-13,8;UBERON:0003060,1.94e-13,8;UBERON:0000080,4.67e-12,9;UBERON:0002120,4.67e-12,9;UBERON:0004875,4.67e-12,9;UBERON:0005721,4.67e-12,9;UBERON:0005754,4.67e-12,9;UBERON:0007297,4.67e-12,9;UBERON:0004876,4.83e-10,11;UBERON:0001225,2.77e-09,12;UBERON:0008987,2.77e-09,12;UBERON:0003887,2.77e-09,12;UBERON:0001851,1.31e-07,15;UBERON:0004211,1.31e-07,15;UBERON:0009773,1.31e-07,15;UBERON:0000353,1.31e-07,15;UBERON:0001231,1.31e-07,15;UBERON:0001285,1.31e-07,15;UBERON:0007684,1.31e-07,15;UBERON:0004208,1.31e-07,15;UBERON:0010077,1.92e-07,4;UBERON:0005389,1.92e-07,4;UBERON:0000484,1.92e-07,4;UBERON:0002546,1.92e-07,4;UBERON:0000965,1.92e-07,4;UBERON:0001803,1.92e-07,4;UBERON:0003073,1.92e-07,4;UBERON:0005426,1.92e-07,4;UBERON:0006555,3.44e-07,16;UBERON:0004819,3.44e-07,16 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0.763976851116555,1.17217447210047,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0,0,0,0,0,1.27587750330633,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0.601892199455438,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,0.831076008928724,0,0,0,0,0,0,0.618246069886334,0.0915694648183434,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.318852545457645,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0.33307196799782,0,0.18714054040822,0.293016358543788,0,0.111443384277478,0,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0.153900517007594,0,0,0.0897576444097721,0.217294743844016,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,0,0,0.300646838828985,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0.290967049465258,0.0882561266915003,0,0,0,0,0,0,0.426905989478705,0.19980960958213,0,0,0,0.14405479798815,0.124252535565433,0.235694034616795,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0.321506296930038,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0.105600336519406,0,0,0,0,0,0.542999601753713,0,0.326587360109409,1.19730191562487,0,0,0,1.75862680413699,0,0,0.13223260174269,0,0,0.320362237703084,0,0,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0.345430341731199,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0.397832444232549,0.752103283492572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.266107110487916,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0.414432328326074,0,0,0,0,0.170426809518315,0,0,0,0,0,0.294450700845729,0.121917924982269,0,0.102662806856247,0,0,0.467878926924211,0,0,0.11294608203896,0,0.150962843566674,0.308696632431779,0,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0.371995018166751,0,0,0,0.109265571963696,0.126698501011437,0.203977659483963,0,0.0918948995348449,0,1.74291005901951,0,0,0.103432995861895,0,0,0.452122368852043,0,0,0.25458863311266,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0.763976851116555,1.17217447210047,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0,0,0,0,0,1.27587750330633,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0.601892199455438,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,0.831076008928724,0,0,0,0,0,0,0.618246069886334,0.0915694648183434,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.318852545457645,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0.33307196799782,0,0.18714054040822,0.293016358543788,0,0.111443384277478,0,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0.153900517007594,0,0,0.0897576444097721,0.217294743844016,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,0,0,0.300646838828985,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0.290967049465258,0.0882561266915003,0,0,0,0,0,0,0.426905989478705,0.19980960958213,0,0,0,0.14405479798815,0.124252535565433,0.235694034616795,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0.321506296930038,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0.105600336519406,0,0,0,0,0,0.542999601753713,0,0.326587360109409,1.19730191562487,0,0,0,1.75862680413699,0,0,0.13223260174269,0,0,0.320362237703084,0,0,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0.345430341731199,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0.397832444232549,0.752103283492572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.266107110487916,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0.414432328326074,0,0,0,0,0.170426809518315,0,0,0,0,0,0.294450700845729,0.121917924982269,0,0.102662806856247,0,0,0.467878926924211,0,0,0.11294608203896,0,0.150962843566674,0.308696632431779,0,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0.371995018166751,0,0,0,0.109265571963696,0.126698501011437,0.203977659483963,0,0.0918948995348449,0,1.74291005901951,0,0,0.103432995861895,0,0,0.452122368852043,0,0,0.25458863311266,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr3:47476613..47476628,- | |||
}} | }} |
Latest revision as of 21:33, 29 July 2015
Short description: | p@chr3:47476613..47476628, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:47476613..47476628, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 7.35e-21 | 5 |
glomerular cell | 3.29e-15 | 7 |
kidney corpuscule cell | 3.29e-15 | 7 |
light melanocyte | 1.81e-09 | 3 |
kidney cortical cell | 2.77e-09 | 12 |
renal cortical epithelial cell | 2.77e-09 | 12 |
epithelial cell of nephron | 1.31e-07 | 15 |
crystallin accumulating cell | 1.92e-07 | 4 |
vertebrate lens cell | 1.92e-07 | 4 |
lens epithelial cell | 1.92e-07 | 4 |
kidney cell | 8.11e-07 | 17 |
kidney epithelial cell | 8.11e-07 | 17 |