FFCP PHASE1:Hg19::chr3:47484661..47484686,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:47484661..47484686,- to FFCP PHASE1:Hg19::chr3:47484661..47484686,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22937 | |EntrezGene=22937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30634 | |HGNC=30634 | ||
|TSSclassifier=strong | |||
|UniProt=F8WDQ1 | |UniProt=F8WDQ1 | ||
|association_with_transcript=-77bp_to_ENST00000420588,ENST00000485967_5end | |||
|cluster_id=chr3:47484661..47484686,- | |||
|coexpression_cluster_id=C235 | |||
|description=CAGE_peak_4_at_SCAP_5end | |||
|id=chr3:47484661..47484686,- | |||
|ontology_enrichment_celltype=CL:0000181!2.56e-07!12;CL:0000417!2.56e-07!12;CL:0000668!2.56e-07!12;CL:0000414!2.56e-07!12;CL:0000412!2.56e-07!12;CL:0000182!2.56e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.14e-25;12!CL:0002623;7.62e-13;3!CL:0002563;5.55e-10;4!CL:0000622;4.69e-08;5!CL:0002251;2.35e-07;20!CL:0000154;7.58e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.43e-25,12;CL:0000223,1.49e-16,58;CL:0002623,8.84e-13,3;CL:0002563,5.55e-10,4;CL:0000622,5.12e-08,5;CL:0002251,2.45e-07,20;CL:0000154,8.15e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.92e-28;11!UBERON:0009497;1.52e-23;13!UBERON:0003104;1.05e-21;31!CL:0000223;2.83e-10;58!UBERON:0008425;3.88e-10;1!UBERON:0001041;5.72e-10;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!1.77e-17!26;UBERON:0002365!4.35e-13!31;UBERON:0002330!4.35e-13!31;UBERON:0004921!5.53e-13!129;UBERON:0004185!5.53e-13!129;UBERON:0002107!9.01e-12!19;UBERON:0006925!9.01e-12!19;UBERON:0008836!9.01e-12!19;UBERON:0001007!1.36e-11!155;UBERON:0001555!1.36e-11!155;UBERON:0007026!1.36e-11!155;UBERON:0009854!3.09e-11!23;UBERON:0004119!1.28e-10!169;UBERON:0000925!1.28e-10!169;UBERON:0006595!1.28e-10!169;UBERON:0009497!4.60e-10!25;UBERON:0000015!4.60e-10!25;UBERON:0002423!4.60e-10!25;UBERON:0006235!4.60e-10!25;UBERON:0004161!4.60e-10!25;UBERON:0008835!7.70e-10!22;UBERON:0003894!7.70e-10!22;UBERON:0009856!1.25e-09!26;UBERON:0000077!3.74e-09!130;UBERON:0002530!4.32e-09!59;UBERON:0003929!5.56e-09!54;UBERON:0007499!2.22e-08!25;UBERON:0005409!3.43e-08!35;UBERON:0007023!9.24e-08!115;UBERON:0002368!1.40e-07!35;UBERON:0000059!1.76e-07!11;UBERON:0004177!2.03e-07!7;UBERON:0005172!2.77e-07!55;UBERON:0005173!2.77e-07!55;UBERON:0002106!4.05e-07!3;UBERON:0004854!4.05e-07!3;UBERON:0009034!4.05e-07!3;UBERON:0002095!4.05e-07!3;UBERON:0004782!4.05e-07!3;UBERON:0003281!4.05e-07!3;UBERON:0009664!4.05e-07!3;UBERON:0002296!4.05e-07!3;UBERON:0005602!4.05e-07!3;UBERON:0001179!4.05e-07!3;UBERON:0006293!4.05e-07!3;UBERON:0001041!7.18e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;1.61e-37;31!UBERON:0002330;1.61e-37;31!UBERON:0002107;2.86e-35;19!UBERON:0006925;2.86e-35;19!UBERON:0002423;1.58e-26;25!UBERON:0002368;5.12e-18;33!UBERON:0000949;5.00e-13;43!UBERON:0002530;6.02e-13;57!UBERON:0001389;2.59e-10;1!UBERON:0000026;2.59e-10;1!UBERON:0008784;2.59e-10;1!UBERON:0006058;2.59e-10;1!UBERON:0003663;2.59e-10;1!UBERON:0004256;2.59e-10;1!UBERON:0004708;2.59e-10;1!UBERON:0002101;2.59e-10;1!UBERON:0004709;2.59e-10;1!UBERON:0002529;2.59e-10;1!UBERON:0010538;2.59e-10;1!UBERON:0003661;2.59e-10;1!UBERON:0010890;2.59e-10;1!UBERON:0002471;2.59e-10;1!UBERON:0001383;2.59e-10;1!UBERON:0010758;2.59e-10;1!UBERON:0010707;2.59e-10;1!UBERON:0000978;2.59e-10;1!UBERON:0002103;2.59e-10;1!UBERON:0001665;2.59e-10;1!UBERON:0003823;2.59e-10;1!UBERON:0000154;2.59e-10;1!UBERON:0010709;2.59e-10;1!UBERON:0001242;5.55e-10;4!UBERON:0001262;5.55e-10;4!UBERON:0004786;5.55e-10;4!UBERON:0004808;5.55e-10;4!UBERON:0001277;5.55e-10;4!UBERON:0001882;7.54e-10;1!UBERON:0005403;7.54e-10;1!UBERON:0001007;1.80e-09;81!UBERON:0002417;4.41e-08;58!UBERON:0000916;4.41e-08;58!UBERON:0005172;6.80e-08;52!UBERON:0005173;6.80e-08;52!UBERON:0001044;7.58e-07;6!UBERON:0003293;7.58e-07;6!UBERON:0003294;7.58e-07;6!UBERON:0010047;7.58e-07;6!UBERON:0003408;7.58e-07;6!UBERON:0000167;7.58e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,3.10e-38,31;UBERON:0002330,3.10e-38,31;UBERON:0002107,1.83e-35,19;UBERON:0006925,1.83e-35,19;UBERON:0008836,1.83e-35,19;UBERON:0008835,1.80e-30,22;UBERON:0003894,1.80e-30,22;UBERON:0009854,4.28e-29,23;UBERON:0007499,1.13e-26,25;UBERON:0009497,1.13e-26,25;UBERON:0000015,1.13e-26,25;UBERON:0002423,1.13e-26,25;UBERON:0006235,1.13e-26,25;UBERON:0004161,1.13e-26,25;UBERON:0009856,1.33e-25,26;UBERON:0002530,1.00e-22,59;UBERON:0003929,2.87e-21,54;UBERON:0002368,1.05e-18,35;UBERON:0000949,2.85e-14,45;UBERON:0004921,6.56e-14,118;UBERON:0005911,2.48e-13,82;UBERON:0005172,1.11e-11,54;UBERON:0005173,1.11e-11,54;UBERON:0001007,7.40e-11,145;UBERON:0001555,7.40e-11,145;UBERON:0007026,7.40e-11,145;UBERON:0000490,1.25e-10,148;UBERON:0002417,2.19e-10,60;UBERON:0000916,2.19e-10,60;UBERON:0005418,2.59e-10,1;UBERON:0001389,2.59e-10,1;UBERON:0000026,2.59e-10,1;UBERON:0008784,2.59e-10,1;UBERON:0006058,2.59e-10,1;UBERON:0003663,2.59e-10,1;UBERON:0004256,2.59e-10,1;UBERON:0004708,2.59e-10,1;UBERON:0002101,2.59e-10,1;UBERON:0004709,2.59e-10,1;UBERON:0002529,2.59e-10,1;UBERON:0010538,2.59e-10,1;UBERON:0003661,2.59e-10,1;UBERON:0010890,2.59e-10,1;UBERON:0002471,2.59e-10,1;UBERON:0001383,2.59e-10,1;UBERON:0004357,2.59e-10,1;UBERON:0004347,2.59e-10,1;UBERON:0005420,2.59e-10,1;UBERON:0005732,2.59e-10,1;UBERON:0010758,2.59e-10,1;UBERON:0010707,2.59e-10,1;UBERON:0000978,2.59e-10,1;UBERON:0002103,2.59e-10,1;UBERON:0001665,2.59e-10,1;UBERON:0003823,2.59e-10,1;UBERON:0000154,2.59e-10,1;UBERON:0010709,2.59e-10,1;UBERON:0005733,2.59e-10,1;UBERON:0005730,2.59e-10,1;UBERON:0001041,2.74e-10,87;UBERON:0001242,5.55e-10,4;UBERON:0001262,5.55e-10,4;UBERON:0004786,5.55e-10,4;UBERON:0004808,5.55e-10,4;UBERON:0001277,5.55e-10,4;UBERON:0001882,8.24e-10,1;UBERON:0005403,8.24e-10,1;UBERON:0005256,9.12e-10,122;UBERON:0004119,1.33e-09,160;UBERON:0000925,1.33e-09,160;UBERON:0006595,1.33e-09,160;UBERON:0003104,3.31e-08,160;UBERON:0009142,3.31e-08,160;UBERON:0011216,4.65e-07,223;UBERON:0001044,8.15e-07,6;UBERON:0003293,8.15e-07,6;UBERON:0003294,8.15e-07,6;UBERON:0010047,8.15e-07,6;UBERON:0000167,8.15e-07,6 | |||
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| ||
|short_description=p4@SCAP | |||
}} | }} |
Latest revision as of 12:38, 18 September 2015
Short description: | p4@SCAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCAP_5end |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | -77bp_to_ENST00000420588, ENST00000485967_5end |
EntrezGene: | SCAP |
HGNC: | 30634 |
UniProt: | F8WDQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.43e-25 | 12 |
endodermal cell | 1.49e-16 | 58 |
acinar cell of salivary gland | 8.84e-13 | 3 |
intestinal epithelial cell | 5.55e-10 | 4 |
acinar cell | 5.12e-08 | 5 |
epithelial cell of alimentary canal | 2.45e-07 | 20 |
protein secreting cell | 8.15e-07 | 6 |