FFCP PHASE1:Hg19::chr5:125758813..125758845,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:125758813..125758845,+ to FFCP PHASE1:Hg19::chr5:125758813..125758845,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=65983 | |EntrezGene=65983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24911 | |HGNC=24911 | ||
|TSSclassifier=strong | |||
|UniProt=Q96HH9,E9PD09 | |UniProt=Q96HH9,E9PD09 | ||
|association_with_transcript=0bp_to_ENST00000285689,ENST00000515200_5end | |||
|cluster_id=chr5:125758813..125758845,+ | |||
|description=CAGE_peak_3_at_GRAMD3_5end | |||
|id=chr5:125758813..125758845,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.25e-13!57;UBERON:0005068!6.25e-13!57;UBERON:0006241!6.25e-13!57;UBERON:0007135!6.25e-13!57;UBERON:0007023!1.88e-12!115;UBERON:0002616!3.96e-12!59;UBERON:0002780!8.99e-11!41;UBERON:0001890!8.99e-11!41;UBERON:0006240!8.99e-11!41;UBERON:0003080!5.75e-10!42;UBERON:0003075!8.70e-10!86;UBERON:0007284!8.70e-10!86;UBERON:0000955!1.46e-09!69;UBERON:0006238!1.46e-09!69;UBERON:0002346!5.28e-09!90;UBERON:0001017!9.70e-09!82;UBERON:0005743!1.52e-08!86;UBERON:0002020!5.06e-08!34;UBERON:0003528!5.06e-08!34;UBERON:0001893!5.37e-08!34;UBERON:0002791!1.24e-07!33;UBERON:0000153!1.86e-07!129;UBERON:0007811!1.86e-07!129;UBERON:0000033!2.26e-07!123;UBERON:0000073!5.26e-07!94;UBERON:0001016!5.26e-07!94;UBERON:0001869!5.34e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.56e-08;41!UBERON:0001890;2.56e-08;41!UBERON:0000073;5.45e-08;53!UBERON:0002616;5.45e-08;53!UBERON:0000125;1.27e-07;9!UBERON:0002308;1.27e-07;9!UBERON:0001893;3.08e-07;34!UBERON:0003528;5.03e-07;34!UBERON:0002020;5.03e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.09e-15,56;UBERON:0005068,9.09e-15,56;UBERON:0006241,9.09e-15,56;UBERON:0007135,9.09e-15,56;UBERON:0000073,1.39e-13,53;UBERON:0002616,1.39e-13,53;UBERON:0007023,2.79e-12,114;UBERON:0002780,5.07e-12,41;UBERON:0001890,5.07e-12,41;UBERON:0003080,5.07e-12,41;UBERON:0006240,5.07e-12,41;UBERON:0003075,1.34e-10,82;UBERON:0007284,1.34e-10,82;UBERON:0000955,1.34e-10,68;UBERON:0006238,1.34e-10,68;UBERON:0001017,1.81e-09,81;UBERON:0010371,1.88e-09,104;UBERON:0002346,3.47e-09,86;UBERON:0003528,7.95e-09,34;UBERON:0002020,7.95e-09,34;UBERON:0001893,8.51e-09,34;UBERON:0001016,5.45e-08,89;UBERON:0002791,8.98e-08,32;UBERON:0001869,1.21e-07,32;UBERON:0003056,1.48e-07,61;UBERON:0000125,1.64e-07,9;UBERON:0002308,1.64e-07,9;UBERON:0010314,1.90e-07,132 | |||
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| ||
|short_description=p3@GRAMD3 | |||
}} | }} |
Latest revision as of 01:06, 20 September 2015
Short description: | p3@GRAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GRAMD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000285689, ENST00000515200_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | Q96HH9E9PD09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 9.09e-15 | 56 |
neural rod | 9.09e-15 | 56 |
future spinal cord | 9.09e-15 | 56 |
neural keel | 9.09e-15 | 56 |
regional part of nervous system | 1.39e-13 | 53 |
regional part of brain | 1.39e-13 | 53 |
adult organism | 2.79e-12 | 114 |
regional part of forebrain | 5.07e-12 | 41 |
forebrain | 5.07e-12 | 41 |
anterior neural tube | 5.07e-12 | 41 |
future forebrain | 5.07e-12 | 41 |
neural plate | 1.34e-10 | 82 |
presumptive neural plate | 1.34e-10 | 82 |
brain | 1.34e-10 | 68 |
future brain | 1.34e-10 | 68 |
central nervous system | 1.81e-09 | 81 |
ecto-epithelium | 1.88e-09 | 104 |
neurectoderm | 3.47e-09 | 86 |
brain grey matter | 7.95e-09 | 34 |
gray matter | 7.95e-09 | 34 |
telencephalon | 8.51e-09 | 34 |
nervous system | 5.45e-08 | 89 |
regional part of telencephalon | 8.98e-08 | 32 |
cerebral hemisphere | 1.21e-07 | 32 |
pre-chordal neural plate | 1.48e-07 | 61 |
neural nucleus | 1.64e-07 | 9 |
nucleus of brain | 1.64e-07 | 9 |
structure with developmental contribution from neural crest | 1.90e-07 | 132 |