FFCP PHASE1:Hg19::chr6:10411343..10411365,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:10411343..10411365,+ to FFCP PHASE1:Hg19::chr6:10411343..10411365,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:10411343..10411365,+ | |||
|description=CAGE_peak_at_chr6:10411343..10411365,+ | |||
|id=chr6:10411343..10411365,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.41e-14!254;CL:0000148!1.09e-10!10;CL:0000541!1.09e-10!10;CL:0000710!4.73e-09!20;CL:0000075!9.63e-09!27;CL:0000147!5.90e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.02e-23;10!CL:0002567;2.95e-20;3!CL:0000147;1.37e-16;14!CL:0000710;2.34e-15;20!CL:0000075;3.73e-11;27!CL:0002566;2.69e-08;1!CL:0000222;9.38e-08;1!CL:0002077;2.67e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.41e-23,10;CL:0000541,1.41e-23,10;CL:0002567,8.47e-21,3;CL:0000147,1.06e-16,14;CL:0000710,1.80e-15,20;CL:0000075,3.09e-11,27;CL:0002077,9.62e-09,34;CL:0002566,2.70e-08,1;CL:0000333,1.00e-06,41 | |||
|ontology_enrichment_development_v019=UBERON:0003099;9.38e-08;1!UBERON:0003852;9.38e-08;1 | |||
|ontology_enrichment_disease=DOID:0050687!2.22e-13!143;DOID:162!6.48e-10!235;DOID:14566!2.51e-09!239;DOID:305!8.23e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:3112;9.38e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,7.45e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.01e-12!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.30e-11;9!UBERON:0001557;1.30e-11;9!UBERON:0005705;9.38e-08;1!UBERON:0008193;9.38e-08;1!UBERON:0010912;9.38e-08;1!UBERON:0002514;9.38e-08;1!UBERON:0003457;9.38e-08;1!UBERON:0008907;9.38e-08;1!UBERON:0008001;9.38e-08;1!UBERON:0007213;9.38e-08;1!UBERON:0009891;9.38e-08;1!UBERON:0007914;9.38e-08;1!UBERON:0007375;9.38e-08;1!UBERON:0003323;9.38e-08;1!UBERON:0010258;9.38e-08;1!UBERON:0005253;9.38e-08;1!UBERON:0007842;9.38e-08;1!UBERON:0002397;9.38e-08;1!UBERON:0003113;9.38e-08;1!UBERON:0003277;9.38e-08;1!UBERON:0001709;9.38e-08;1!UBERON:0002244;9.38e-08;1!UBERON:0005620;9.38e-08;1!UBERON:0010364;9.38e-08;1!UBERON:0004288;9.38e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.20e-11,9;UBERON:0005705,9.10e-08,1;UBERON:0008193,9.10e-08,1;UBERON:0010912,9.10e-08,1;UBERON:0002514,9.10e-08,1;UBERON:0003457,9.10e-08,1;UBERON:0008907,9.10e-08,1;UBERON:0008001,9.10e-08,1;UBERON:0007213,9.10e-08,1;UBERON:0009891,9.10e-08,1;UBERON:0007914,9.10e-08,1;UBERON:0009292,9.10e-08,1;UBERON:0003099,9.10e-08,1;UBERON:0007375,9.10e-08,1;UBERON:0003323,9.10e-08,1;UBERON:0010258,9.10e-08,1;UBERON:0007842,9.10e-08,1;UBERON:0009494,9.10e-08,1;UBERON:0010042,9.10e-08,1;UBERON:0010045,9.10e-08,1;UBERON:0010259,9.10e-08,1;UBERON:0010359,9.10e-08,1;UBERON:0009526,9.10e-08,1;UBERON:0002397,9.10e-08,1;UBERON:0003113,9.10e-08,1;UBERON:0003277,9.10e-08,1;UBERON:0001709,9.10e-08,1;UBERON:0004066,9.10e-08,1;UBERON:0002244,9.10e-08,1;UBERON:0005620,9.10e-08,1;UBERON:0004362,9.10e-08,1;UBERON:0010364,9.10e-08,1;UBERON:0010046,9.10e-08,1;UBERON:0005868,9.10e-08,1;UBERON:0007238,9.10e-08,1;UBERON:0004288,9.10e-08,1;UBERON:0004068,9.10e-08,1;UBERON:0010334,9.10e-08,1;UBERON:0003852,9.10e-08,1;UBERON:0010253,9.10e-08,1 | |||
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| ||
|short_description=p@chr6:10411343..10411365,+ | |||
}} | }} |
Latest revision as of 17:47, 30 July 2015
Short description: | p@chr6:10411343..10411365, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:10411343..10411365, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.41e-23 | 10 |
melanoblast | 1.41e-23 | 10 |
light melanocyte | 8.47e-21 | 3 |
pigment cell | 1.06e-16 | 14 |
neurecto-epithelial cell | 1.80e-15 | 20 |
columnar/cuboidal epithelial cell | 3.09e-11 | 27 |
ecto-epithelial cell | 9.62e-09 | 34 |
dark melanocyte | 2.70e-08 | 1 |
migratory neural crest cell | 1.00e-06 | 41 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 7.45e-08 | 1 |