FFCP PHASE1:Hg19::chr6:163835630..163835662,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:163835630..163835662,+ to FFCP PHASE1:Hg19::chr6:163835630..163835662,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9444 | |EntrezGene=9444 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21100 | |HGNC=21100 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PU8,Q8WY44 | |UniProt=Q96PU8,Q8WY44 | ||
|association_with_transcript=-12bp_to_ENST00000275262,ENST00000361752,ENST00000392127,ENST00000453779,NM_006775,NM_206853,NM_206854,NM_206855,uc003que.2,uc003quf.2,uc003qug.2,uc003quh.2,uc003qui.2,uc003quj.2_5end | |||
|cluster_id=chr6:163835630..163835662,+ | |||
|description=CAGE_peak_6_at_QKI_5end | |||
|id=chr6:163835630..163835662,+ | |||
|ontology_enrichment_celltype=CL:0000763!3.17e-29!112;CL:0000049!3.17e-29!112;CL:0000766!4.64e-28!76;CL:0000557!5.00e-25!71;CL:0002009!2.94e-24!65;CL:0000839!3.31e-23!70;CL:0002194!4.22e-23!63;CL:0000576!4.22e-23!63;CL:0000040!4.22e-23!63;CL:0000559!4.22e-23!63;CL:0002057!3.09e-22!42;CL:0000860!1.58e-19!45;CL:0000037!6.83e-18!172;CL:0000566!6.83e-18!172;CL:0002032!1.43e-17!165;CL:0000837!1.43e-17!165;CL:0000738!1.40e-16!140;CL:0000988!4.29e-16!182;CL:0002031!3.21e-12!124;CL:0002087!2.14e-11!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.62e-18;33!CL:0002057;3.62e-18;33!CL:0000473;7.80e-16;39!CL:0000234;7.80e-16;39!CL:0000576;2.70e-15;48!CL:0000766;6.62e-13;69!CL:0000763;2.87e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.38e-31,108;CL:0000049,3.38e-31,108;CL:0000766,1.21e-30,72;CL:0000557,1.60e-27,67;CL:0002009,6.94e-27,61;CL:0002194,1.08e-25,59;CL:0000576,1.08e-25,59;CL:0000040,1.08e-25,59;CL:0000559,1.08e-25,59;CL:0000839,1.39e-25,66;CL:0000473,9.76e-23,48;CL:0000234,9.76e-23,48;CL:0000860,3.07e-22,42;CL:0002057,3.07e-22,42;CL:0000037,6.78e-19,168;CL:0002032,1.36e-18,161;CL:0000837,1.36e-18,161;CL:0000738,1.16e-17,136;CL:0000988,1.77e-17,177;CL:0002031,3.67e-13,120;CL:0002087,2.55e-12,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.53e-16;42!CL:0000049;1.07e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.79e-21!102;UBERON:0003061!1.79e-21!102;UBERON:0002193!1.40e-19!112;UBERON:0002371!4.28e-19!80;UBERON:0001474!1.70e-18!86;UBERON:0002405!2.45e-16!115;UBERON:0004765!8.01e-14!101;UBERON:0001434!8.01e-14!101;UBERON:0007023!1.02e-11!115;UBERON:0003075!3.12e-08!86;UBERON:0007284!3.12e-08!86;UBERON:0002346!5.88e-08!90;UBERON:0001049!2.80e-07!57;UBERON:0005068!2.80e-07!57;UBERON:0006241!2.80e-07!57;UBERON:0007135!2.80e-07!57;UBERON:0000073!9.85e-07!94;UBERON:0001016!9.85e-07!94 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.94e-23,98;UBERON:0003061,3.94e-23,98;UBERON:0002193,5.49e-21,108;UBERON:0002371,6.35e-21,76;UBERON:0001474,3.50e-20,82;UBERON:0002405,1.53e-18,93;UBERON:0004765,2.85e-17,90;UBERON:0001434,1.26e-14,100;UBERON:0007023,2.05e-11,114;UBERON:0001049,2.57e-07,56;UBERON:0005068,2.57e-07,56;UBERON:0006241,2.57e-07,56;UBERON:0007135,2.57e-07,56;UBERON:0003075,3.93e-07,82;UBERON:0007284,3.93e-07,82;UBERON:0002346,6.88e-07,86 | |||
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| ||
|short_description=p6@QKI | |||
}} | }} |
Latest revision as of 18:23, 16 September 2015
Short description: | p6@QKI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_QKI_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000275262, ENST00000361752, ENST00000392127, ENST00000453779, NM_006775, NM_206853, NM_206854, NM_206855, uc003que.2, uc003quf.2, uc003qug.2, uc003quh.2, uc003qui.2, uc003quj.2_5end |
EntrezGene: | QKI |
HGNC: | 21100 |
UniProt: | Q96PU8Q8WY44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.38e-31 | 108 |
common myeloid progenitor | 3.38e-31 | 108 |
myeloid leukocyte | 1.21e-30 | 72 |
granulocyte monocyte progenitor cell | 1.60e-27 | 67 |
macrophage dendritic cell progenitor | 6.94e-27 | 61 |
monopoietic cell | 1.08e-25 | 59 |
monocyte | 1.08e-25 | 59 |
monoblast | 1.08e-25 | 59 |
promonocyte | 1.08e-25 | 59 |
myeloid lineage restricted progenitor cell | 1.39e-25 | 66 |
defensive cell | 9.76e-23 | 48 |
phagocyte | 9.76e-23 | 48 |
classical monocyte | 3.07e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.07e-22 | 42 |
hematopoietic stem cell | 6.78e-19 | 168 |
hematopoietic oligopotent progenitor cell | 1.36e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.36e-18 | 161 |
leukocyte | 1.16e-17 | 136 |
hematopoietic cell | 1.77e-17 | 177 |
hematopoietic lineage restricted progenitor cell | 3.67e-13 | 120 |
nongranular leukocyte | 2.55e-12 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.94e-23 | 98 |
blood island | 3.94e-23 | 98 |
hemolymphoid system | 5.49e-21 | 108 |
bone marrow | 6.35e-21 | 76 |
bone element | 3.50e-20 | 82 |
immune system | 1.53e-18 | 93 |
skeletal element | 2.85e-17 | 90 |
skeletal system | 1.26e-14 | 100 |
adult organism | 2.05e-11 | 114 |
neural tube | 2.57e-07 | 56 |
neural rod | 2.57e-07 | 56 |
future spinal cord | 2.57e-07 | 56 |
neural keel | 2.57e-07 | 56 |
neural plate | 3.93e-07 | 82 |
presumptive neural plate | 3.93e-07 | 82 |
neurectoderm | 6.88e-07 | 86 |