FFCP PHASE1:Hg19::chr6:64345698..64345750,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:64345698..64345750,+ to FFCP PHASE1:Hg19::chr6:64345698..64345750,+: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23469 | |EntrezGene=23469 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8921 | |HGNC=8921 | ||
|TSSclassifier=strong | |||
|UniProt=Q92576,E9PE34,B3KP41,E7EVH3,E7ER40,B0AZS7 | |UniProt=Q92576,E9PE34,B3KP41,E7EVH3,E7ER40,B0AZS7 | ||
|association_with_transcript=0bp_to_ENST00000262043,ENST00000481385,ENST00000494284,ENST00000506783,ENST00000515594,uc003pem.2,uc003pen.2,uc010kaf.1,uc010kag.1,uc010kah.1,uc011dxs.1_5end | |||
|cluster_id=chr6:64345698..64345750,+ | |||
|coexpression_cluster_id=C972 | |||
|description=CAGE_peak_2_at_PHF3_5end | |||
|id=chr6:64345698..64345750,+ | |||
|ontology_enrichment_celltype=CL:0000037!9.72e-41!172;CL:0000566!9.72e-41!172;CL:0002032!5.45e-37!165;CL:0000837!5.45e-37!165;CL:0000988!1.19e-35!182;CL:0000738!2.66e-35!140;CL:0002031!7.73e-29!124;CL:0002087!4.46e-28!119;CL:0000763!8.55e-20!112;CL:0000049!8.55e-20!112;CL:0000838!1.53e-16!52;CL:0000542!2.36e-16!53;CL:0000051!2.36e-16!53;CL:0000766!5.09e-16!76;CL:0000839!4.22e-13!70;CL:0000557!1.21e-12!71;CL:0000791!2.24e-11!18;CL:0000789!2.24e-11!18;CL:0002420!2.24e-11!18;CL:0002419!2.24e-11!18;CL:0000790!2.24e-11!18;CL:0002194!9.48e-11!63;CL:0000576!9.48e-11!63;CL:0000040!9.48e-11!63;CL:0000559!9.48e-11!63;CL:0002009!1.91e-10!65;CL:0000084!1.73e-09!25;CL:0000827!1.73e-09!25;CL:0002057!1.93e-09!42;CL:0000860!2.31e-09!45;CL:0000625!1.59e-07!11;CL:0000945!9.08e-07!24;CL:0000826!9.08e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.12e-11;18!CL:0000789;2.12e-11;18!CL:0002419;2.12e-11;18!CL:0000542;5.78e-10;53!CL:0000084;1.73e-09;25!CL:0002087;6.26e-09;104!CL:0000738;8.55e-08;136!CL:0000576;1.34e-07;48!CL:0000625;1.59e-07;11!CL:0000766;3.54e-07;69!CL:0000988;9.08e-07;177!CL:0000945;9.52e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.90e-41,168;CL:0002032,2.85e-37,161;CL:0000837,2.85e-37,161;CL:0000988,1.40e-36,177;CL:0000738,1.09e-35,136;CL:0002031,3.36e-29,120;CL:0002087,1.87e-28,115;CL:0000763,4.97e-20,108;CL:0000049,4.97e-20,108;CL:0000838,1.53e-16,52;CL:0000766,2.26e-16,72;CL:0000542,2.35e-16,53;CL:0000051,2.35e-16,53;CL:0000839,2.16e-13,66;CL:0000557,6.55e-13,67;CL:0000791,2.23e-11,18;CL:0000789,2.23e-11,18;CL:0002420,2.23e-11,18;CL:0002419,2.23e-11,18;CL:0000790,2.23e-11,18;CL:0002194,5.38e-11,59;CL:0000576,5.38e-11,59;CL:0000040,5.38e-11,59;CL:0000559,5.38e-11,59;CL:0002009,1.15e-10,61;CL:0000084,1.73e-09,25;CL:0000827,1.73e-09,25;CL:0000860,1.93e-09,42;CL:0002057,1.93e-09,42;CL:0000473,1.31e-08,48;CL:0000234,1.31e-08,48;CL:0000625,1.59e-07,11;CL:0000945,9.07e-07,24;CL:0000826,9.07e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;2.12e-11;18!CL:0000051;5.78e-10;53!CL:0002057;4.92e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.39e-16!102;UBERON:0003061!2.39e-16!102;UBERON:0007023!2.71e-14!115;UBERON:0002193!3.66e-14!112;UBERON:0002371!3.37e-10!80;UBERON:0001474!3.54e-10!86;UBERON:0002405!6.96e-10!115;UBERON:0004765!9.44e-08!101;UBERON:0001434!9.44e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.50e-16,98;UBERON:0003061,1.50e-16,98;UBERON:0002193,2.79e-14,108;UBERON:0007023,4.46e-14,114;UBERON:0002405,2.46e-10,93;UBERON:0002371,2.49e-10,76;UBERON:0001474,2.76e-10,82;UBERON:0004765,4.17e-08,90;UBERON:0001434,3.08e-07,100 | |||
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| ||
|short_description=p2@PHF3 | |||
}} | }} |
Latest revision as of 12:49, 19 September 2015
Short description: | p2@PHF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PHF3_5end |
Coexpression cluster: | C972_granulocyte_CD4_CD19_Neutrophils_acute_CD8_Eosinophils |
Association with transcript: | 0bp_to_ENST00000262043, ENST00000481385, ENST00000494284, ENST00000506783, ENST00000515594, uc003pem.2, uc003pen.2, uc010kaf.1, uc010kag.1, uc010kah.1, uc011dxs.1_5end |
EntrezGene: | PHF3 |
HGNC: | 8921 |
UniProt: | Q92576E9PE34B3KP41E7EVH3E7ER40B0AZS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.50e-16 | 98 |
blood island | 1.50e-16 | 98 |
hemolymphoid system | 2.79e-14 | 108 |
adult organism | 4.46e-14 | 114 |
immune system | 2.46e-10 | 93 |
bone marrow | 2.49e-10 | 76 |
bone element | 2.76e-10 | 82 |
skeletal element | 4.17e-08 | 90 |
skeletal system | 3.08e-07 | 100 |